RNA–Protein interactions for RNA: ENST00000508037.1

HMGB3P16-201, Transcript of high mobility group box 3 pseudogene 16, humanhuman

BASIC

Gene HMGB3P16, Length 287 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P16-201ENST00000508037 A0A087WWV3 80 aa5.63□□□□□ -1.51
HMGB3P16-201ENST00000508037 A0A1B0GTH6 734 aa5.63□□□□□ -1.51
HMGB3P16-201ENST00000508037 ERICH2A1L162 156 aa5.63□□□□□ -1.51
HMGB3P16-201ENST00000508037 CTAGE15A4D2H0 777 aa5.63□□□□□ -1.51
HMGB3P16-201ENST00000508037 A6NNZ2 444 aa5.63□□□□□ -1.51
HMGB3P16-201ENST00000508037 ATP5J2-PTCD1G3V325 749 aa5.63□□□□□ -1.51
HMGB3P16-201ENST00000508037 MAP2K7O14733 419 aa5.63□□□□□ -1.51
HMGB3P16-201ENST00000508037 GPAA1O43292 621 aa5.63□□□□□ -1.51
HMGB3P16-201ENST00000508037 PTCD1O75127 700 aaKnown RBP5.63□□□□□ -1.51
HMGB3P16-201ENST00000508037 UQCRFS1P1P0C7P4 283 aa5.63□□□□□ -1.51
HMGB3P16-201ENST00000508037 CTAGE8P0CG41 777 aa5.63□□□□□ -1.51
HMGB3P16-201ENST00000508037 GTF2E1P29083 439 aaPredicted RBP5.63□□□□□ -1.51
HMGB3P16-201ENST00000508037 LMAN1P49257 510 aa5.63□□□□□ -1.51
HMGB3P16-201ENST00000508037 SARSP49591 514 aaKnown RBP5.63□□□□□ -1.51
HMGB3P16-201ENST00000508037 ANTXR2P58335 489 aa5.63□□□□□ -1.51
HMGB3P16-201ENST00000508037 TIMM10P62072 90 aa5.63□□□□□ -1.51
HMGB3P16-201ENST00000508037 RAD51AP2Q09MP3 1159 aa5.63□□□□□ -1.51
HMGB3P16-201ENST00000508037 SEMA3FQ13275 785 aa5.63□□□□□ -1.51
HMGB3P16-201ENST00000508037 SLC39A6Q13433 755 aa5.63□□□□□ -1.51
HMGB3P16-201ENST00000508037 LAPTM4AQ15012 233 aa5.63□□□□□ -1.51
HMGB3P16-201ENST00000508037 UBE3CQ15386 1083 aa5.63□□□□□ -1.51
HMGB3P16-201ENST00000508037 KIF4BQ2VIQ3 1234 aa5.63□□□□□ -1.51
HMGB3P16-201ENST00000508037 TUBB8Q3ZCM7 444 aa5.63□□□□□ -1.51
HMGB3P16-201ENST00000508037 MSS51Q4VC12 460 aa5.63□□□□□ -1.51
HMGB3P16-201ENST00000508037 TAF7LQ5H9L4 462 aa5.63□□□□□ -1.51
HMGB3P16-201ENST00000508037 TTLL5Q6EMB2 1281 aa5.63□□□□□ -1.51
HMGB3P16-201ENST00000508037 IQCEQ6IPM2 695 aa5.63□□□□□ -1.51
HMGB3P16-201ENST00000508037 CCDC70Q6NSX1 233 aa5.63□□□□□ -1.51
HMGB3P16-201ENST00000508037 TMED8Q6PL24 325 aaPredicted RBP5.63□□□□□ -1.51
HMGB3P16-201ENST00000508037 APOA5Q6Q788 366 aa5.63□□□□□ -1.51
HMGB3P16-201ENST00000508037 RNF19BQ6ZMZ0 732 aa5.63□□□□□ -1.51
HMGB3P16-201ENST00000508037 CHST3Q7LGC8 479 aa5.63□□□□□ -1.51
HMGB3P16-201ENST00000508037 CTAGE6Q86UF2 777 aa5.63□□□□□ -1.51
HMGB3P16-201ENST00000508037 METTL16Q86W50 562 aaKnown RBP5.63□□□□□ -1.51
HMGB3P16-201ENST00000508037 TMTC1Q8IUR5 882 aa5.63□□□□□ -1.51
HMGB3P16-201ENST00000508037 CTAGE4Q8IX94 777 aa5.63□□□□□ -1.51
HMGB3P16-201ENST00000508037 FAM160A2Q8N612 972 aaPredicted RBP5.63□□□□□ -1.51
HMGB3P16-201ENST00000508037 TC2NQ8N9U0 490 aa5.63□□□□□ -1.51
HMGB3P16-201ENST00000508037 CCDC148Q8NFR7 591 aa5.63□□□□□ -1.51
HMGB3P16-201ENST00000508037 RUBCNQ92622 972 aa5.63□□□□□ -1.51
HMGB3P16-201ENST00000508037 DPF2Q92785 391 aa5.63□□□□□ -1.51
HMGB3P16-201ENST00000508037 KIFC2Q96AC6 838 aa5.63□□□□□ -1.51
HMGB3P16-201ENST00000508037 NAPGQ99747 312 aaPredicted RBP5.63□□□□□ -1.51
HMGB3P16-201ENST00000508037 PLA2G12BQ9BX93 195 aa5.63□□□□□ -1.51
HMGB3P16-201ENST00000508037 VIPAS39Q9H9C1 493 aa5.63□□□□□ -1.51
HMGB3P16-201ENST00000508037 BRMS1Q9HCU9 246 aa5.63□□□□□ -1.51
HMGB3P16-201ENST00000508037 ST7Q9NRC1 585 aa5.63□□□□□ -1.51
HMGB3P16-201ENST00000508037 ADAM21Q9UKJ8 722 aa5.63□□□□□ -1.51
HMGB3P16-201ENST00000508037 MAN1B1Q9UKM7 699 aa5.63□□□□□ -1.51
HMGB3P16-201ENST00000508037 WWC3Q9ULE0 1092 aa5.63□□□□□ -1.51
HMGB3P16-201ENST00000508037 SLC12A7Q9Y666 1083 aa5.63□□□□□ -1.51
HMGB3P16-201ENST00000508037 NDUFB9Q9Y6M9 179 aa5.63□□□□□ -1.51
HMGB3P16-201ENST00000508037 C5P01031 1676 aa5.63□□□□□ -1.51
HMGB3P16-201ENST00000508037 RGPD2P0DJD1 1756 aa5.62□□□□□ -1.51
HMGB3P16-201ENST00000508037 ERVV-2B6SEH9 535 aa5.62□□□□□ -1.51
HMGB3P16-201ENST00000508037 MFAP3LO75121 409 aa5.62□□□□□ -1.51
HMGB3P16-201ENST00000508037 SEC31AO94979 1220 aaKnown RBP5.62□□□□□ -1.51
HMGB3P16-201ENST00000508037 DEXIO95424 95 aa5.62□□□□□ -1.51
HMGB3P16-201ENST00000508037 MMP1P03956 469 aa5.62□□□□□ -1.51
HMGB3P16-201ENST00000508037 APPP05067 770 aa5.62□□□□□ -1.51
HMGB3P16-201ENST00000508037 CSB-PGBD3P0DP91 1061 aa5.62□□□□□ -1.51
HMGB3P16-201ENST00000508037 IFNAR1P17181 557 aa5.62□□□□□ -1.51
HMGB3P16-201ENST00000508037 GNAT2P19087 354 aa5.62□□□□□ -1.51
HMGB3P16-201ENST00000508037 ADD2P35612 726 aa5.62□□□□□ -1.51
HMGB3P16-201ENST00000508037 CEBPAP49715 358 aaPredicted RBP5.62□□□□□ -1.51
HMGB3P16-201ENST00000508037 HAND2P61296 217 aa5.62□□□□□ -1.51
HMGB3P16-201ENST00000508037 AKAP17AQ02040 695 aaKnown RBP5.62□□□□□ -1.51
HMGB3P16-201ENST00000508037 CKAP4Q07065 602 aaKnown RBP5.62□□□□□ -1.51
HMGB3P16-201ENST00000508037 PDE4DQ08499 809 aa5.62□□□□□ -1.51
HMGB3P16-201ENST00000508037 TRIM28Q13263 835 aaKnown RBP5.62□□□□□ -1.51
HMGB3P16-201ENST00000508037 IFIT5Q13325 482 aaKnown RBP5.62□□□□□ -1.51
HMGB3P16-201ENST00000508037 NR1I3Q14994 352 aa5.62□□□□□ -1.51
HMGB3P16-201ENST00000508037 DIXDC1Q155Q3 683 aa5.62□□□□□ -1.51
HMGB3P16-201ENST00000508037 LONRF3Q496Y0 759 aa5.62□□□□□ -1.51
HMGB3P16-201ENST00000508037 TMEM67Q5HYA8 995 aa5.62□□□□□ -1.51
HMGB3P16-201ENST00000508037 ISM2Q6H9L7 571 aa5.62□□□□□ -1.51
HMGB3P16-201ENST00000508037 CYP26C1Q6V0L0 522 aa5.62□□□□□ -1.51
HMGB3P16-201ENST00000508037 TOGARAM2Q6ZUX3 1019 aa5.62□□□□□ -1.51
HMGB3P16-201ENST00000508037 RASGRP2Q7LDG7 609 aa5.62□□□□□ -1.51
HMGB3P16-201ENST00000508037 KRT28Q7Z3Y7 464 aa5.62□□□□□ -1.51
HMGB3P16-201ENST00000508037 PARP9Q8IXQ6 854 aa5.62□□□□□ -1.51
HMGB3P16-201ENST00000508037 FAM177A1Q8N128 213 aaPredicted RBP5.62□□□□□ -1.51
HMGB3P16-201ENST00000508037 IGSF22Q8N9C0 903 aa5.62□□□□□ -1.51
HMGB3P16-201ENST00000508037 LRRN4CLQ8ND94 238 aa5.62□□□□□ -1.51
HMGB3P16-201ENST00000508037 NEK11Q8NG66 645 aa5.62□□□□□ -1.51
HMGB3P16-201ENST00000508037 IPO4Q8TEX9 1081 aaKnown RBP5.62□□□□□ -1.51
HMGB3P16-201ENST00000508037 FERMT2Q96AC1 680 aa5.62□□□□□ -1.51
HMGB3P16-201ENST00000508037 DHX58Q96C10 678 aa5.62□□□□□ -1.51
HMGB3P16-201ENST00000508037 XAGE2Q96GT9 111 aa5.62□□□□□ -1.51
HMGB3P16-201ENST00000508037 GSDMAQ96QA5 445 aa5.62□□□□□ -1.51
HMGB3P16-201ENST00000508037 WDR24Q96S15 920 aa5.62□□□□□ -1.51
HMGB3P16-201ENST00000508037 USB1Q9BQ65 265 aaKnown RBP5.62□□□□□ -1.51
HMGB3P16-201ENST00000508037 BEGAINQ9BUH8 593 aa5.62□□□□□ -1.51
HMGB3P16-201ENST00000508037 NACAP1Q9BZK3 213 aa5.62□□□□□ -1.51
HMGB3P16-201ENST00000508037 RNF41Q9H4P4 317 aaPredicted RBP5.62□□□□□ -1.51
HMGB3P16-201ENST00000508037 AATFQ9NY61 560 aaKnown RBP eCLIP5.62□□□□□ -1.51
HMGB3P16-201ENST00000508037 FEZ2Q9UHY8 353 aaPredicted RBP5.62□□□□□ -1.51
HMGB3P16-201ENST00000508037 CCDC9Q9Y3X0 531 aaKnown RBP5.62□□□□□ -1.51
HMGB3P16-201ENST00000508037 SRPRBQ9Y5M8 271 aaKnown RBP5.62□□□□□ -1.51
HMGB3P16-201ENST00000508037 SYNRGQ9UMZ2 1314 aa5.62□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms