RNA–Protein interactions for RNA: ENST00000507944.5

CLDND1-216, Transcript of claudin domain containing 1, humanhuman

TSL 4

Gene CLDND1, Length 903 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-216ENST00000507944 TSHZ3Q63HK5 1081 aa25.02■■□□□ 1.6
CLDND1-216ENST00000507944 CTR9Q6PD62 1173 aa25.02■■□□□ 1.6
CLDND1-216ENST00000507944 STRBPQ96SI9 672 aaKnown RBP25.02■■□□□ 1.6
CLDND1-216ENST00000507944 ARHGEF10LQ9HCE6 1279 aa25.02■■□□□ 1.6
CLDND1-216ENST00000507944 ICA1Q05084 483 aa25.01■■□□□ 1.59
CLDND1-216ENST00000507944 CCL14Q16627 93 aa25.01■■□□□ 1.59
CLDND1-216ENST00000507944 KIAA1755Q5JYT7 1200 aa25.01■■□□□ 1.59
CLDND1-216ENST00000507944 NECAB2Q7Z6G3 386 aa25.01■■□□□ 1.59
CLDND1-216ENST00000507944 CLEC10AQ8IUN9 316 aa25.01■■□□□ 1.59
CLDND1-216ENST00000507944 ANKLE1Q8NAG6 615 aa25.01■■□□□ 1.59
CLDND1-216ENST00000507944 APBA2Q99767 749 aa25.01■■□□□ 1.59
CLDND1-216ENST00000507944 TANGO6Q9C0B7 1094 aa25.01■■□□□ 1.59
CLDND1-216ENST00000507944 TMX2Q9Y320 296 aa25.01■■□□□ 1.59
CLDND1-216ENST00000507944 PTPREP23469 700 aa25■■□□□ 1.59
CLDND1-216ENST00000507944 CACNB2Q08289 660 aaPredicted RBP25■■□□□ 1.59
CLDND1-216ENST00000507944 LPAR1Q92633 364 aa25■■□□□ 1.59
CLDND1-216ENST00000507944 SH2D4AQ9H788 454 aa25■■□□□ 1.59
CLDND1-216ENST00000507944 SLC15A5A6NIM6 579 aa24.99■■□□□ 1.59
CLDND1-216ENST00000507944 RNF113AO15541 343 aaKnown RBP24.99■■□□□ 1.59
CLDND1-216ENST00000507944 DIS3LQ8TF46 1054 aaKnown RBP24.99■■□□□ 1.59
CLDND1-216ENST00000507944 APPBP2Q92624 585 aa24.99■■□□□ 1.59
CLDND1-216ENST00000507944 OSBP2Q969R2 916 aa24.99■■□□□ 1.59
CLDND1-216ENST00000507944 ARPP21Q9UBL0 812 aaPredicted RBP24.99■■□□□ 1.59
CLDND1-216ENST00000507944 IVNS1ABPQ9Y6Y0 642 aa24.99■■□□□ 1.59
CLDND1-216ENST00000507944 EVI5O60447 810 aa24.98■■□□□ 1.59
CLDND1-216ENST00000507944 CHRDL2Q6WN34 429 aa24.98■■□□□ 1.59
CLDND1-216ENST00000507944 SPICE1Q8N0Z3 855 aa24.98■■□□□ 1.59
CLDND1-216ENST00000507944 VCPKMTQ9H867 229 aa24.98■■□□□ 1.59
CLDND1-216ENST00000507944 OGDHLQ9ULD0 1010 aa24.98■■□□□ 1.59
CLDND1-216ENST00000507944 RLFQ13129 1914 aa24.98■■□□□ 1.59
CLDND1-216ENST00000507944 GSG1L2A8MUP6 293 aa24.97■■□□□ 1.59
CLDND1-216ENST00000507944 ZFYP08048 801 aaPredicted RBP24.97■■□□□ 1.59
CLDND1-216ENST00000507944 DSG3P32926 999 aa24.97■■□□□ 1.59
CLDND1-216ENST00000507944 RRP1P56182 461 aaKnown RBP24.97■■□□□ 1.59
CLDND1-216ENST00000507944 SBK1Q52WX2 424 aa24.97■■□□□ 1.59
CLDND1-216ENST00000507944 GIMAP6Q6P9H5 292 aa24.97■■□□□ 1.59
CLDND1-216ENST00000507944 KANSL2Q9H9L4 492 aa24.97■■□□□ 1.59
CLDND1-216ENST00000507944 TTC41PQ6P2S7 1318 aa24.96■■□□□ 1.59
CLDND1-216ENST00000507944 FLOT1O75955 427 aa24.96■■□□□ 1.59
CLDND1-216ENST00000507944 EEF2P13639 858 aaKnown RBP24.96■■□□□ 1.59
CLDND1-216ENST00000507944 ATP2B2Q01814 1243 aa24.96■■□□□ 1.59
CLDND1-216ENST00000507944 GRB14Q14449 540 aa24.96■■□□□ 1.59
CLDND1-216ENST00000507944 MOV10L1Q9BXT6 1211 aaKnown RBP24.96■■□□□ 1.59
CLDND1-216ENST00000507944 NBPF3Q9H094 633 aa24.96■■□□□ 1.59
CLDND1-216ENST00000507944 PCDH10Q9P2E7 1040 aa24.96■■□□□ 1.59
CLDND1-216ENST00000507944 ERC2O15083 957 aa24.95■■□□□ 1.58
CLDND1-216ENST00000507944 CCND3P30281 292 aaPredicted RBP24.95■■□□□ 1.58
CLDND1-216ENST00000507944 MNX1P50219 401 aaPredicted RBP24.95■■□□□ 1.58
CLDND1-216ENST00000507944 FXR1P51114 621 aaKnown RBP eCLIP24.95■■□□□ 1.58
CLDND1-216ENST00000507944 MFSD14CQ5VZR4 134 aa24.95■■□□□ 1.58
CLDND1-216ENST00000507944 MB21D1Q8N884 522 aa24.95■■□□□ 1.58
CLDND1-216ENST00000507944 SPATC1LQ9H0A9 340 aa24.95■■□□□ 1.58
CLDND1-216ENST00000507944 MINDY4BA8MYZ0 360 aa24.94■■□□□ 1.58
CLDND1-216ENST00000507944 WDR46O15213 610 aaKnown RBP24.94■■□□□ 1.58
CLDND1-216ENST00000507944 GPAA1O43292 621 aa24.94■■□□□ 1.58
CLDND1-216ENST00000507944 HOXC6P09630 235 aa24.94■■□□□ 1.58
CLDND1-216ENST00000507944 LRRFIP1Q32MZ4 808 aaKnown RBP24.94■■□□□ 1.58
CLDND1-216ENST00000507944 FLRT1Q9NZU1 646 aa24.94■■□□□ 1.58
CLDND1-216ENST00000507944 ALPK3Q96L96 1907 aa24.93■■□□□ 1.58
CLDND1-216ENST00000507944 GNAT2P19087 354 aa24.93■■□□□ 1.58
CLDND1-216ENST00000507944 STK11IPQ8N1F8 1099 aa24.93■■□□□ 1.58
CLDND1-216ENST00000507944 SHCBP1Q8NEM2 672 aa24.93■■□□□ 1.58
CLDND1-216ENST00000507944 NPLOC4Q8TAT6 608 aa24.93■■□□□ 1.58
CLDND1-216ENST00000507944 PI4K2BQ8TCG2 481 aa24.93■■□□□ 1.58
CLDND1-216ENST00000507944 OTUD7AQ8TE49 926 aaPredicted RBP24.93■■□□□ 1.58
CLDND1-216ENST00000507944 ATG4CQ96DT6 458 aa24.93■■□□□ 1.58
CLDND1-216ENST00000507944 MKNK2Q9HBH9 465 aa24.93■■□□□ 1.58
CLDND1-216ENST00000507944 M0R2C6 588 aa24.92■■□□□ 1.58
CLDND1-216ENST00000507944 STRNO43815 780 aa24.92■■□□□ 1.58
CLDND1-216ENST00000507944 ERCC3P19447 782 aa24.92■■□□□ 1.58
CLDND1-216ENST00000507944 PLS1Q14651 629 aa24.92■■□□□ 1.58
CLDND1-216ENST00000507944 LHX8Q68G74 356 aa24.92■■□□□ 1.58
CLDND1-216ENST00000507944 SAMD1Q6SPF0 538 aaPredicted RBP24.92■■□□□ 1.58
CLDND1-216ENST00000507944 GNL3Q9BVP2 549 aaKnown RBP eCLIP24.92■■□□□ 1.58
CLDND1-216ENST00000507944 C11orf49Q9H6J7 331 aa24.92■■□□□ 1.58
CLDND1-216ENST00000507944 RBM27Q9P2N5 1060 aaKnown RBP24.92■■□□□ 1.58
CLDND1-216ENST00000507944 APPP05067 770 aa24.91■■□□□ 1.58
CLDND1-216ENST00000507944 RASA1P20936 1047 aa24.91■■□□□ 1.58
CLDND1-216ENST00000507944 DPP9Q86TI2 863 aa24.91■■□□□ 1.58
CLDND1-216ENST00000507944 CRBNQ96SW2 442 aa24.91■■□□□ 1.58
CLDND1-216ENST00000507944 EPB41L4AQ9HCS5 686 aaPredicted RBP24.91■■□□□ 1.58
CLDND1-216ENST00000507944 GOPCQ9HD26 462 aa24.91■■□□□ 1.58
CLDND1-216ENST00000507944 PATL2C9JE40 543 aaKnown RBP24.9■■□□□ 1.58
CLDND1-216ENST00000507944 ADORA2AP29274 412 aa24.9■■□□□ 1.58
CLDND1-216ENST00000507944 TDO2P48775 406 aa24.9■■□□□ 1.58
CLDND1-216ENST00000507944 MROH8Q9H579 483 aa24.9■■□□□ 1.58
CLDND1-216ENST00000507944 A0A0G2JMZ2 1700 aa24.89■■□□□ 1.58
CLDND1-216ENST00000507944 PARP14Q460N5 1801 aa24.89■■□□□ 1.58
CLDND1-216ENST00000507944 RAD21O60216 631 aa24.89■■□□□ 1.58
CLDND1-216ENST00000507944 MX1P20591 662 aa24.89■■□□□ 1.58
CLDND1-216ENST00000507944 NCAPG2Q86XI2 1143 aa24.89■■□□□ 1.58
CLDND1-216ENST00000507944 FSD1Q9BTV5 496 aa24.89■■□□□ 1.58
CLDND1-216ENST00000507944 PRO3102Q9H379 93 aa24.89■■□□□ 1.58
CLDND1-216ENST00000507944 ZBTB47Q9UFB7 747 aaPredicted RBP24.89■■□□□ 1.58
CLDND1-216ENST00000507944 ROBO3Q96MS0 1386 aa24.89■■□□□ 1.57
CLDND1-216ENST00000507944 ZNFX1Q9P2E3 1918 aaKnown RBP24.88■■□□□ 1.57
CLDND1-216ENST00000507944 CYP2C19P33261 490 aa24.88■■□□□ 1.57
CLDND1-216ENST00000507944 IFNL3Q8IZI9 196 aa24.88■■□□□ 1.57
CLDND1-216ENST00000507944 SEC62Q99442 399 aaKnown RBP24.88■■□□□ 1.57
CLDND1-216ENST00000507944 FBXO28Q9NVF7 368 aa24.88■■□□□ 1.57
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms