RNA–Protein interactions for RNA: ENST00000506767.1

TCOF1-210, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 5

Gene TCOF1, Length 869 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-210ENST00000506767 USP17L2Q6R6M4 530 aa15.13■□□□□ 0.01
TCOF1-210ENST00000506767 FASTKD5Q7L8L6 764 aaKnown RBP15.13■□□□□ 0.01
TCOF1-210ENST00000506767 PROCA1Q8NCQ7 364 aaPredicted RBP15.13■□□□□ 0.01
TCOF1-210ENST00000506767 ZSCAN10Q96SZ4 725 aaPredicted RBP15.13■□□□□ 0.01
TCOF1-210ENST00000506767 SH2D4AQ9H788 454 aa15.13■□□□□ 0.01
TCOF1-210ENST00000506767 MCM5P33992 734 aa15.12■□□□□ 0.01
TCOF1-210ENST00000506767 EXOSC10Q01780 885 aaKnown RBP15.12■□□□□ 0.01
TCOF1-210ENST00000506767 KIAA1755Q5JYT7 1200 aa15.12■□□□□ 0.01
TCOF1-210ENST00000506767 GPAT2Q6NUI2 795 aa15.12■□□□□ 0.01
TCOF1-210ENST00000506767 IFNL1Q8IU54 200 aa15.12■□□□□ 0.01
TCOF1-210ENST00000506767 ENAHQ8N8S7 591 aaPredicted RBP15.12■□□□□ 0.01
TCOF1-210ENST00000506767 FEZ1Q99689 392 aa15.12■□□□□ 0.01
TCOF1-210ENST00000506767 TMEM47Q9BQJ4 181 aa15.12■□□□□ 0.01
TCOF1-210ENST00000506767 TM6SF1Q9BZW5 370 aa15.12■□□□□ 0.01
TCOF1-210ENST00000506767 VCPKMTQ9H867 229 aa15.12■□□□□ 0.01
TCOF1-210ENST00000506767 STX8Q9UNK0 236 aa15.12■□□□□ 0.01
TCOF1-210ENST00000506767 TNKSO95271 1327 aa15.12■□□□□ 0.01
TCOF1-210ENST00000506767 WDR19Q8NEZ3 1342 aa15.12■□□□□ 0.01
TCOF1-210ENST00000506767 BTBD19C9JJ37 291 aa15.11■□□□□ 0.01
TCOF1-210ENST00000506767 IGF2BP3O00425 579 aaKnown RBP eCLIP15.11■□□□□ 0.01
TCOF1-210ENST00000506767 PRC1O43663 620 aa15.11■□□□□ 0.01
TCOF1-210ENST00000506767 HMGB1P09429 215 aaKnown RBP15.11■□□□□ 0.01
TCOF1-210ENST00000506767 TOP1P11387 765 aaKnown RBP15.11■□□□□ 0.01
TCOF1-210ENST00000506767 ATP2B2Q01814 1243 aa15.11■□□□□ 0.01
TCOF1-210ENST00000506767 ZYXQ15942 572 aaKnown RBP15.11■□□□□ 0.01
TCOF1-210ENST00000506767 DHX32Q7L7V1 743 aaKnown RBP15.11■□□□□ 0.01
TCOF1-210ENST00000506767 CHST3Q7LGC8 479 aa15.11■□□□□ 0.01
TCOF1-210ENST00000506767 ANKRD23Q86SG2 305 aa15.11■□□□□ 0.01
TCOF1-210ENST00000506767 GMCL1P1Q8NEA9 526 aa15.11■□□□□ 0.01
TCOF1-210ENST00000506767 IGDCC4Q8TDY8 1250 aa15.11■□□□□ 0.01
TCOF1-210ENST00000506767 JAKMIP1Q96N16 626 aaKnown RBP15.11■□□□□ 0.01
TCOF1-210ENST00000506767 UBAC1Q9BSL1 405 aa15.11■□□□□ 0.01
TCOF1-210ENST00000506767 ZCCHC17Q9NP64 241 aaKnown RBP15.11■□□□□ 0.01
TCOF1-210ENST00000506767 TMOD4Q9NZQ9 345 aa15.11■□□□□ 0.01
TCOF1-210ENST00000506767 AGTPBP1Q9UPW5 1226 aa15.11■□□□□ 0.01
TCOF1-210ENST00000506767 SLC45A1Q9Y2W3 748 aa15.11■□□□□ 0.01
TCOF1-210ENST00000506767 F5H6K3 240 aa15.1■□□□□ 0.01
TCOF1-210ENST00000506767 PSMA5P28066 241 aa15.1■□□□□ 0.01
TCOF1-210ENST00000506767 HOXA7P31268 230 aaPredicted RBP15.1■□□□□ 0.01
TCOF1-210ENST00000506767 RBM25P49756 843 aaKnown RBP15.1■□□□□ 0.01
TCOF1-210ENST00000506767 KLRC3Q07444 240 aa15.1■□□□□ 0.01
TCOF1-210ENST00000506767 TREML2Q5T2D2 321 aa15.1■□□□□ 0.01
TCOF1-210ENST00000506767 GADL1Q6ZQY3 521 aa15.1■□□□□ 0.01
TCOF1-210ENST00000506767 FAM43AQ8N2R8 423 aa15.1■□□□□ 0.01
TCOF1-210ENST00000506767 LPAR1Q92633 364 aa15.1■□□□□ 0.01
TCOF1-210ENST00000506767 TMEM87BQ96K49 555 aa15.1■□□□□ 0.01
TCOF1-210ENST00000506767 ZSWIM6Q9HCJ5 1215 aa15.1■□□□□ 0.01
TCOF1-210ENST00000506767 GOPCQ9HD26 462 aa15.1■□□□□ 0.01
TCOF1-210ENST00000506767 IFIT3O14879 490 aaKnown RBP15.09■□□□□ 0.01
TCOF1-210ENST00000506767 VCAM1P19320 739 aa15.09■□□□□ 0.01
TCOF1-210ENST00000506767 SART3Q15020 963 aaKnown RBP15.09■□□□□ 0.01
TCOF1-210ENST00000506767 BLOC1S2Q6QNY1 142 aa15.09■□□□□ 0.01
TCOF1-210ENST00000506767 LRRC47Q8N1G4 583 aaKnown RBP15.09■□□□□ 0.01
TCOF1-210ENST00000506767 C22orf23Q9BZE7 217 aa15.09■□□□□ 0.01
TCOF1-210ENST00000506767 ERICH2A1L162 156 aa15.08■□□□□ 0
TCOF1-210ENST00000506767 SH2B2O14492 632 aaPredicted RBP15.08■□□□□ 0
TCOF1-210ENST00000506767 WDR46O15213 610 aaKnown RBP15.08■□□□□ 0
TCOF1-210ENST00000506767 NDUFB10O96000 172 aa15.08■□□□□ 0
TCOF1-210ENST00000506767 CPA1P15085 419 aa15.08■□□□□ 0
TCOF1-210ENST00000506767 CASTP20810 708 aaKnown RBP15.08■□□□□ 0
TCOF1-210ENST00000506767 RPS6KB1P23443 525 aa15.08■□□□□ 0
TCOF1-210ENST00000506767 LIFRP42702 1097 aa15.08■□□□□ 0
TCOF1-210ENST00000506767 LBX1P52954 281 aa15.08■□□□□ 0
TCOF1-210ENST00000506767 MAP2K1Q02750 393 aaPredicted RBP15.08■□□□□ 0
TCOF1-210ENST00000506767 WTAPQ15007 396 aa15.08■□□□□ 0
TCOF1-210ENST00000506767 TMEM67Q5HYA8 995 aa15.08■□□□□ 0
TCOF1-210ENST00000506767 IFIT1BQ5T764 474 aaKnown RBP15.08■□□□□ 0
TCOF1-210ENST00000506767 SLFN13Q68D06 897 aa15.08■□□□□ 0
TCOF1-210ENST00000506767 OTUD7BQ6GQQ9 843 aa15.08■□□□□ 0
TCOF1-210ENST00000506767 RUFY3Q7L099 469 aa15.08■□□□□ 0
TCOF1-210ENST00000506767 SPICE1Q8N0Z3 855 aa15.08■□□□□ 0
TCOF1-210ENST00000506767 FBXL16Q8N461 479 aa15.08■□□□□ 0
TCOF1-210ENST00000506767 LY9Q9HBG7 655 aa15.08■□□□□ 0
TCOF1-210ENST00000506767 SENP2Q9HC62 589 aa15.08■□□□□ 0
TCOF1-210ENST00000506767 GPHNQ9NQX3 736 aaPredicted RBP15.08■□□□□ 0
TCOF1-210ENST00000506767 WBP1LQ9NX94 342 aa15.08■□□□□ 0
TCOF1-210ENST00000506767 PDHXO00330 501 aa15.07■□□□□ 0
TCOF1-210ENST00000506767 ALDH1A1P00352 501 aa15.07■□□□□ 0
TCOF1-210ENST00000506767 SNHG28P0DPA3 235 aa15.07■□□□□ 0
TCOF1-210ENST00000506767 CTCFP49711 727 aaPredicted RBP15.07■□□□□ 0
TCOF1-210ENST00000506767 PABPC4Q13310 644 aaKnown RBP eCLIP15.07■□□□□ 0
TCOF1-210ENST00000506767 CATSPERGQ6ZRH7 1159 aa15.07■□□□□ 0
TCOF1-210ENST00000506767 TMTC2Q8N394 836 aa15.07■□□□□ 0
TCOF1-210ENST00000506767 PNMA1Q8ND90 353 aa15.07■□□□□ 0
TCOF1-210ENST00000506767 GMCL1Q96IK5 515 aa15.07■□□□□ 0
TCOF1-210ENST00000506767 TCEANC2Q96MN5 208 aa15.07■□□□□ 0
TCOF1-210ENST00000506767 KIF2CQ99661 725 aa15.07■□□□□ 0
TCOF1-210ENST00000506767 CFHR5Q9BXR6 569 aa15.07■□□□□ 0
TCOF1-210ENST00000506767 LRRC2Q9BYS8 371 aa15.07■□□□□ 0
TCOF1-210ENST00000506767 AGXT2Q9BYV1 514 aa15.07■□□□□ 0
TCOF1-210ENST00000506767 RPAP3Q9H6T3 665 aaPredicted RBP15.07■□□□□ 0
TCOF1-210ENST00000506767 KAT14Q9H8E8 782 aa15.07■□□□□ 0
TCOF1-210ENST00000506767 RNF186Q9NXI6 227 aa15.07■□□□□ 0
TCOF1-210ENST00000506767 PARP14Q460N5 1801 aa15.06■□□□□ 0
TCOF1-210ENST00000506767 RLFQ13129 1914 aa15.06■□□□□ 0
TCOF1-210ENST00000506767 USP17L15C9J2P7 530 aa15.06■□□□□ 0
TCOF1-210ENST00000506767 USP17L13C9JLJ4 530 aa15.06■□□□□ 0
TCOF1-210ENST00000506767 USP17L11C9JVI0 530 aa15.06■□□□□ 0
TCOF1-210ENST00000506767 USP17L18D6R9N7 530 aa15.06■□□□□ 0
TCOF1-210ENST00000506767 USP17L22D6RA61 530 aa15.06■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms