RNA–Protein interactions for RNA: ENST00000504380.1

PDLIM7-212, Transcript of PDZ and LIM domain 7, humanhuman

TSL 2

Gene PDLIM7, Length 556 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-212ENST00000504380 A0A0G2JLL6 359 aaPredicted RBP15.61■□□□□ 0.09
PDLIM7-212ENST00000504380 IFIT3O14879 490 aaKnown RBP15.61■□□□□ 0.09
PDLIM7-212ENST00000504380 CASTP20810 708 aaKnown RBP15.61■□□□□ 0.09
PDLIM7-212ENST00000504380 NOGQ13253 232 aa15.61■□□□□ 0.09
PDLIM7-212ENST00000504380 SEC23AQ15436 765 aa15.61■□□□□ 0.09
PDLIM7-212ENST00000504380 USP17L2Q6R6M4 530 aa15.61■□□□□ 0.09
PDLIM7-212ENST00000504380 PRRT2Q7Z6L0 340 aaPredicted RBP15.61■□□□□ 0.09
PDLIM7-212ENST00000504380 IQCA1Q86XH1 822 aa15.61■□□□□ 0.09
PDLIM7-212ENST00000504380 SPICE1Q8N0Z3 855 aa15.61■□□□□ 0.09
PDLIM7-212ENST00000504380 ENAHQ8N8S7 591 aaPredicted RBP15.61■□□□□ 0.09
PDLIM7-212ENST00000504380 PTPN18Q99952 460 aa15.61■□□□□ 0.09
PDLIM7-212ENST00000504380 TMEM47Q9BQJ4 181 aa15.61■□□□□ 0.09
PDLIM7-212ENST00000504380 TBC1D2Q9BYX2 928 aa15.61■□□□□ 0.09
PDLIM7-212ENST00000504380 UPF3BQ9BZI7 483 aaKnown RBP15.61■□□□□ 0.09
PDLIM7-212ENST00000504380 KIAA1683Q9H0B3 1180 aa15.61■□□□□ 0.09
PDLIM7-212ENST00000504380 MANSC4A6NHS7 340 aaPredicted RBP15.6■□□□□ 0.09
PDLIM7-212ENST00000504380 CETPP11597 493 aa15.6■□□□□ 0.09
PDLIM7-212ENST00000504380 MCM5P33992 734 aa15.6■□□□□ 0.09
PDLIM7-212ENST00000504380 NOVP48745 357 aa15.6■□□□□ 0.09
PDLIM7-212ENST00000504380 EXOSC10Q01780 885 aaKnown RBP15.6■□□□□ 0.09
PDLIM7-212ENST00000504380 TMEM67Q5HYA8 995 aa15.6■□□□□ 0.09
PDLIM7-212ENST00000504380 SH3D19Q5HYK7 790 aa15.6■□□□□ 0.09
PDLIM7-212ENST00000504380 TREML2Q5T2D2 321 aa15.6■□□□□ 0.09
PDLIM7-212ENST00000504380 GPAT2Q6NUI2 795 aa15.6■□□□□ 0.09
PDLIM7-212ENST00000504380 BLOC1S2Q6QNY1 142 aa15.6■□□□□ 0.09
PDLIM7-212ENST00000504380 DHX32Q7L7V1 743 aaKnown RBP15.6■□□□□ 0.09
PDLIM7-212ENST00000504380 IGDCC4Q8TDY8 1250 aa15.6■□□□□ 0.09
PDLIM7-212ENST00000504380 NUP88Q99567 741 aaPredicted RBP15.6■□□□□ 0.09
PDLIM7-212ENST00000504380 TMOD4Q9NZQ9 345 aa15.6■□□□□ 0.09
PDLIM7-212ENST00000504380 C19orf81C9J6K1 198 aa15.59■□□□□ 0.09
PDLIM7-212ENST00000504380 BTBD19C9JJ37 291 aa15.59■□□□□ 0.09
PDLIM7-212ENST00000504380 IGF2BP3O00425 579 aaKnown RBP eCLIP15.59■□□□□ 0.09
PDLIM7-212ENST00000504380 TOP1P11387 765 aaKnown RBP15.59■□□□□ 0.09
PDLIM7-212ENST00000504380 FAM43AQ8N2R8 423 aa15.59■□□□□ 0.09
PDLIM7-212ENST00000504380 MKL1Q969V6 931 aa15.59■□□□□ 0.09
PDLIM7-212ENST00000504380 VCPKMTQ9H867 229 aa15.59■□□□□ 0.09
PDLIM7-212ENST00000504380 TESPA1A2RU30 521 aaPredicted RBP15.58■□□□□ 0.08
PDLIM7-212ENST00000504380 F5H6K3 240 aa15.58■□□□□ 0.08
PDLIM7-212ENST00000504380 SH2B2O14492 632 aaPredicted RBP15.58■□□□□ 0.08
PDLIM7-212ENST00000504380 NDUFB10O96000 172 aa15.58■□□□□ 0.08
PDLIM7-212ENST00000504380 RPS6KB1P23443 525 aa15.58■□□□□ 0.08
PDLIM7-212ENST00000504380 PSMA5P28066 241 aa15.58■□□□□ 0.08
PDLIM7-212ENST00000504380 KLRC3Q07444 240 aa15.58■□□□□ 0.08
PDLIM7-212ENST00000504380 WTAPQ15007 396 aa15.58■□□□□ 0.08
PDLIM7-212ENST00000504380 IFIT1BQ5T764 474 aaKnown RBP15.58■□□□□ 0.08
PDLIM7-212ENST00000504380 SLFN13Q68D06 897 aa15.58■□□□□ 0.08
PDLIM7-212ENST00000504380 DGKHQ86XP1 1220 aa15.58■□□□□ 0.08
PDLIM7-212ENST00000504380 TTC14Q96N46 770 aa15.58■□□□□ 0.08
PDLIM7-212ENST00000504380 LARP6Q9BRS8 491 aaKnown RBP15.58■□□□□ 0.08
PDLIM7-212ENST00000504380 UPF2Q9HAU5 1272 aaKnown RBP15.58■□□□□ 0.08
PDLIM7-212ENST00000504380 LY9Q9HBG7 655 aa15.58■□□□□ 0.08
PDLIM7-212ENST00000504380 ZSWIM6Q9HCJ5 1215 aa15.58■□□□□ 0.08
PDLIM7-212ENST00000504380 ERICH2A1L162 156 aa15.57■□□□□ 0.08
PDLIM7-212ENST00000504380 CCDC85CA6NKD9 419 aa15.57■□□□□ 0.08
PDLIM7-212ENST00000504380 VCAM1P19320 739 aa15.57■□□□□ 0.08
PDLIM7-212ENST00000504380 MAP2K2P36507 400 aa15.57■□□□□ 0.08
PDLIM7-212ENST00000504380 TM4SF4P48230 202 aa15.57■□□□□ 0.08
PDLIM7-212ENST00000504380 USP14P54578 494 aa15.57■□□□□ 0.08
PDLIM7-212ENST00000504380 ANAPC15P60006 121 aa15.57■□□□□ 0.08
PDLIM7-212ENST00000504380 CCDC178Q5BJE1 867 aa15.57■□□□□ 0.08
PDLIM7-212ENST00000504380 FAM83BQ5T0W9 1011 aa15.57■□□□□ 0.08
PDLIM7-212ENST00000504380 SAMD1Q6SPF0 538 aaPredicted RBP15.57■□□□□ 0.08
PDLIM7-212ENST00000504380 Q6ZUG5 572 aa15.57■□□□□ 0.08
PDLIM7-212ENST00000504380 RUFY3Q7L099 469 aa15.57■□□□□ 0.08
PDLIM7-212ENST00000504380 FASTKD5Q7L8L6 764 aaKnown RBP15.57■□□□□ 0.08
PDLIM7-212ENST00000504380 RAB11FIP4Q86YS3 637 aa15.57■□□□□ 0.08
PDLIM7-212ENST00000504380 IFNL1Q8IU54 200 aa15.57■□□□□ 0.08
PDLIM7-212ENST00000504380 ANKS1AQ92625 1134 aa15.57■□□□□ 0.08
PDLIM7-212ENST00000504380 KIF2CQ99661 725 aa15.57■□□□□ 0.08
PDLIM7-212ENST00000504380 BEGAINQ9BUH8 593 aa15.57■□□□□ 0.08
PDLIM7-212ENST00000504380 RPAP3Q9H6T3 665 aaPredicted RBP15.57■□□□□ 0.08
PDLIM7-212ENST00000504380 SH2D4AQ9H788 454 aa15.57■□□□□ 0.08
PDLIM7-212ENST00000504380 KAT14Q9H8E8 782 aa15.57■□□□□ 0.08
PDLIM7-212ENST00000504380 GOPCQ9HD26 462 aa15.57■□□□□ 0.08
PDLIM7-212ENST00000504380 LOC285556D6RIA3 1793 aa15.57■□□□□ 0.08
PDLIM7-212ENST00000504380 PDHXO00330 501 aa15.56■□□□□ 0.08
PDLIM7-212ENST00000504380 HMGB1P09429 215 aaKnown RBP15.56■□□□□ 0.08
PDLIM7-212ENST00000504380 RBM25P49756 843 aaKnown RBP15.56■□□□□ 0.08
PDLIM7-212ENST00000504380 NT5C2P49902 561 aa15.56■□□□□ 0.08
PDLIM7-212ENST00000504380 SREBF2Q12772 1141 aa15.56■□□□□ 0.08
PDLIM7-212ENST00000504380 SART3Q15020 963 aaKnown RBP15.56■□□□□ 0.08
PDLIM7-212ENST00000504380 PPP4R3BQ5MIZ7 849 aa15.56■□□□□ 0.08
PDLIM7-212ENST00000504380 NFXL1Q6ZNB6 911 aa15.56■□□□□ 0.08
PDLIM7-212ENST00000504380 PROCA1Q8NCQ7 364 aaPredicted RBP15.56■□□□□ 0.08
PDLIM7-212ENST00000504380 PNMA1Q8ND90 353 aa15.56■□□□□ 0.08
PDLIM7-212ENST00000504380 TMEM87BQ96K49 555 aa15.56■□□□□ 0.08
PDLIM7-212ENST00000504380 C12orf42Q96LP6 360 aa15.56■□□□□ 0.08
PDLIM7-212ENST00000504380 TBC1D32Q96NH3 1257 aa15.56■□□□□ 0.08
PDLIM7-212ENST00000504380 MYL10Q9BUA6 226 aa15.56■□□□□ 0.08
PDLIM7-212ENST00000504380 TM6SF1Q9BZW5 370 aa15.56■□□□□ 0.08
PDLIM7-212ENST00000504380 ISY1Q9ULR0 285 aaKnown RBP15.56■□□□□ 0.08
PDLIM7-212ENST00000504380 AGTPBP1Q9UPW5 1226 aa15.56■□□□□ 0.08
PDLIM7-212ENST00000504380 CYP46A1Q9Y6A2 500 aa15.56■□□□□ 0.08
PDLIM7-212ENST00000504380 FRMPD2Q68DX3 1309 aaPredicted RBP15.55■□□□□ 0.08
PDLIM7-212ENST00000504380 KCTD1Q719H9 257 aa15.55■□□□□ 0.08
PDLIM7-212ENST00000504380 ANKRD23Q86SG2 305 aa15.55■□□□□ 0.08
PDLIM7-212ENST00000504380 GMCL1P1Q8NEA9 526 aa15.55■□□□□ 0.08
PDLIM7-212ENST00000504380 GPCPD1Q9NPB8 672 aa15.55■□□□□ 0.08
PDLIM7-212ENST00000504380 PDRG1Q9NUG6 133 aa15.55■□□□□ 0.08
PDLIM7-212ENST00000504380 BRPF3Q9ULD4 1205 aa15.55■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms