RNA–Protein interactions for RNA: ENST00000503139.5

EXOSC9-203, Transcript of exosome component 9, humanhuman

TSL 1 (best)

Gene EXOSC9, Length 1,204 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC9-203ENST00000503139 BEND4Q6ZU67 534 aa11.96□□□□□ -0.49
EXOSC9-203ENST00000503139 TOP6BLQ8N6T0 577 aa11.96□□□□□ -0.49
EXOSC9-203ENST00000503139 DUSP23Q9BVJ7 150 aa11.96□□□□□ -0.49
EXOSC9-203ENST00000503139 KCNF1Q9H3M0 494 aa11.96□□□□□ -0.49
EXOSC9-203ENST00000503139 KDM2BQ8NHM5 1336 aa11.95□□□□□ -0.5
EXOSC9-203ENST00000503139 EPHX1P07099 455 aa11.95□□□□□ -0.5
EXOSC9-203ENST00000503139 ETV3P41162 512 aa11.95□□□□□ -0.5
EXOSC9-203ENST00000503139 SSRP1Q08945 709 aaKnown RBP11.95□□□□□ -0.5
EXOSC9-203ENST00000503139 C2orf27AQ580R0 203 aa11.95□□□□□ -0.5
EXOSC9-203ENST00000503139 DCAF15Q66K64 600 aa11.95□□□□□ -0.5
EXOSC9-203ENST00000503139 PAOXQ6QHF9 649 aa11.95□□□□□ -0.5
EXOSC9-203ENST00000503139 THAP3Q8WTV1 239 aaPredicted RBP11.95□□□□□ -0.5
EXOSC9-203ENST00000503139 RNF141Q8WVD5 230 aa11.95□□□□□ -0.5
EXOSC9-203ENST00000503139 KLHL25Q9H0H3 589 aa11.95□□□□□ -0.5
EXOSC9-203ENST00000503139 ANKRD34BA5PLL1 514 aa11.94□□□□□ -0.5
EXOSC9-203ENST00000503139 SHOXO15266 292 aa11.94□□□□□ -0.5
EXOSC9-203ENST00000503139 RNF4P78317 190 aa11.94□□□□□ -0.5
EXOSC9-203ENST00000503139 NFKBIBQ15653 356 aa11.94□□□□□ -0.5
EXOSC9-203ENST00000503139 ANKRD39Q53RE8 183 aa11.94□□□□□ -0.5
EXOSC9-203ENST00000503139 ZNF662Q6ZS27 426 aa11.94□□□□□ -0.5
EXOSC9-203ENST00000503139 CLEC10AQ8IUN9 316 aa11.94□□□□□ -0.5
EXOSC9-203ENST00000503139 CCDC144CPQ8IYA2 1237 aa11.94□□□□□ -0.5
EXOSC9-203ENST00000503139 GATA6Q92908 595 aa11.94□□□□□ -0.5
EXOSC9-203ENST00000503139 FBXL18Q96ME1 805 aa11.94□□□□□ -0.5
EXOSC9-203ENST00000503139 FAM83CQ9BQN1 747 aa11.94□□□□□ -0.5
EXOSC9-203ENST00000503139 ASPNQ9BXN1 380 aa11.94□□□□□ -0.5
EXOSC9-203ENST00000503139 TMEM260Q9NX78 707 aa11.94□□□□□ -0.5
EXOSC9-203ENST00000503139 SQSTM1Q13501 440 aa11.93□□□□□ -0.5
EXOSC9-203ENST00000503139 ZNF513Q8N8E2 541 aaPredicted RBP11.93□□□□□ -0.5
EXOSC9-203ENST00000503139 MKRN2Q9H000 416 aaKnown RBP11.93□□□□□ -0.5
EXOSC9-203ENST00000503139 CNTNAP4Q9C0A0 1308 aa11.92□□□□□ -0.5
EXOSC9-203ENST00000503139 LEFTY1O75610 366 aa11.92□□□□□ -0.5
EXOSC9-203ENST00000503139 CHMP4BP1P59074 171 aa11.92□□□□□ -0.5
EXOSC9-203ENST00000503139 HEATR6Q6AI08 1181 aaKnown RBP11.92□□□□□ -0.5
EXOSC9-203ENST00000503139 LEMD3Q9Y2U8 911 aa11.92□□□□□ -0.5
EXOSC9-203ENST00000503139 ESYT3A0FGR9 886 aa11.91□□□□□ -0.5
EXOSC9-203ENST00000503139 RBAK-RBAKDNI3L0D1 243 aa11.91□□□□□ -0.5
EXOSC9-203ENST00000503139 ADCY3O60266 1144 aa11.91□□□□□ -0.5
EXOSC9-203ENST00000503139 NAT2P11245 290 aa11.91□□□□□ -0.5
EXOSC9-203ENST00000503139 FAM214BQ7L5A3 538 aa11.91□□□□□ -0.5
EXOSC9-203ENST00000503139 C7orf61Q8IZ16 206 aa11.91□□□□□ -0.5
EXOSC9-203ENST00000503139 SPATA9Q9BWV2 254 aa11.91□□□□□ -0.5
EXOSC9-203ENST00000503139 FANCLQ9NW38 375 aa11.91□□□□□ -0.5
EXOSC9-203ENST00000503139 APEX2Q9UBZ4 518 aa11.91□□□□□ -0.5
EXOSC9-203ENST00000503139 ZNF451Q9Y4E5 1061 aa11.91□□□□□ -0.5
EXOSC9-203ENST00000503139 AUHQ13825 339 aaKnown RBP11.9□□□□□ -0.5
EXOSC9-203ENST00000503139 PLEKHG4Q58EX7 1191 aa11.9□□□□□ -0.5
EXOSC9-203ENST00000503139 SGSM3Q96HU1 749 aa11.9□□□□□ -0.5
EXOSC9-203ENST00000503139 PTCH2Q9Y6C5 1203 aa11.9□□□□□ -0.5
EXOSC9-203ENST00000503139 IQCA1LA6NCM1 817 aa11.89□□□□□ -0.51
EXOSC9-203ENST00000503139 FAM87AP0C7U9 286 aa11.89□□□□□ -0.51
EXOSC9-203ENST00000503139 ADMP35318 185 aa11.89□□□□□ -0.51
EXOSC9-203ENST00000503139 LRRC47Q8N1G4 583 aaKnown RBP11.89□□□□□ -0.51
EXOSC9-203ENST00000503139 APBA2Q99767 749 aa11.89□□□□□ -0.51
EXOSC9-203ENST00000503139 C7orf69Q9H7B7 122 aa11.89□□□□□ -0.51
EXOSC9-203ENST00000503139 SBNO2Q9Y2G9 1366 aa11.89□□□□□ -0.51
EXOSC9-203ENST00000503139 HMX2A2RU54 273 aa11.88□□□□□ -0.51
EXOSC9-203ENST00000503139 CDC45O75419 566 aa11.88□□□□□ -0.51
EXOSC9-203ENST00000503139 FAM153BP0C7A2 387 aa11.88□□□□□ -0.51
EXOSC9-203ENST00000503139 CD247P20963 164 aa11.88□□□□□ -0.51
EXOSC9-203ENST00000503139 GSK3AP49840 483 aa11.88□□□□□ -0.51
EXOSC9-203ENST00000503139 NBPF9Q3BBW0 867 aa11.88□□□□□ -0.51
EXOSC9-203ENST00000503139 SV2CQ496J9 727 aa11.88□□□□□ -0.51
EXOSC9-203ENST00000503139 ZAR1Q86SH2 424 aa11.88□□□□□ -0.51
EXOSC9-203ENST00000503139 GIMAP7Q8NHV1 300 aa11.88□□□□□ -0.51
EXOSC9-203ENST00000503139 APPBP2Q92624 585 aa11.88□□□□□ -0.51
EXOSC9-203ENST00000503139 FGD4Q96M96 766 aa11.88□□□□□ -0.51
EXOSC9-203ENST00000503139 STK17AQ9UEE5 414 aa11.88□□□□□ -0.51
EXOSC9-203ENST00000503139 TPX2Q9ULW0 747 aaKnown RBP11.88□□□□□ -0.51
EXOSC9-203ENST00000503139 RAXQ9Y2V3 346 aa11.88□□□□□ -0.51
EXOSC9-203ENST00000503139 LONRF2Q1L5Z9 754 aa11.87□□□□□ -0.51
EXOSC9-203ENST00000503139 HOMER1Q86YM7 354 aa11.87□□□□□ -0.51
EXOSC9-203ENST00000503139 TP53INP1Q96A56 240 aa11.87□□□□□ -0.51
EXOSC9-203ENST00000503139 COX4I2Q96KJ9 171 aa11.87□□□□□ -0.51
EXOSC9-203ENST00000503139 GP6Q9HCN6 339 aa11.87□□□□□ -0.51
EXOSC9-203ENST00000503139 WHRNQ9P202 907 aa11.87□□□□□ -0.51
EXOSC9-203ENST00000503139 A0A1W2PQU0 124 aa11.86□□□□□ -0.51
EXOSC9-203ENST00000503139 LRRN2O75325 713 aa11.86□□□□□ -0.51
EXOSC9-203ENST00000503139 CYP7A1P22680 504 aa11.86□□□□□ -0.51
EXOSC9-203ENST00000503139 GATA4P43694 442 aa11.86□□□□□ -0.51
EXOSC9-203ENST00000503139 OGFOD3Q6PK18 319 aa11.86□□□□□ -0.51
EXOSC9-203ENST00000503139 ZBTB38Q8NAP3 1195 aaPredicted RBP11.86□□□□□ -0.51
EXOSC9-203ENST00000503139 GBP3Q9H0R5 595 aa11.86□□□□□ -0.51
EXOSC9-203ENST00000503139 PRDM5Q9NQX1 630 aaPredicted RBP11.86□□□□□ -0.51
EXOSC9-203ENST00000503139 STOML1Q9UBI4 398 aa11.86□□□□□ -0.51
EXOSC9-203ENST00000503139 WDR3Q9UNX4 943 aaKnown RBP eCLIP11.86□□□□□ -0.51
EXOSC9-203ENST00000503139 CAPNS1P04632 268 aa11.85□□□□□ -0.51
EXOSC9-203ENST00000503139 PRR23CQ6ZRP0 262 aa11.85□□□□□ -0.51
EXOSC9-203ENST00000503139 C22orf34Q6ZV56 151 aa11.85□□□□□ -0.51
EXOSC9-203ENST00000503139 ZNF227Q86WZ6 799 aa11.85□□□□□ -0.51
EXOSC9-203ENST00000503139 SHISA5Q8N114 240 aa11.85□□□□□ -0.51
EXOSC9-203ENST00000503139 Q96M66 194 aa11.85□□□□□ -0.51
EXOSC9-203ENST00000503139 HEXIM2Q96MH2 286 aaKnown RBP11.85□□□□□ -0.51
EXOSC9-203ENST00000503139 TBC1D32Q96NH3 1257 aa11.85□□□□□ -0.51
EXOSC9-203ENST00000503139 ARHGEF4Q9NR80 690 aa11.85□□□□□ -0.51
EXOSC9-203ENST00000503139 PCDHB12Q9Y5F1 795 aa11.85□□□□□ -0.51
EXOSC9-203ENST00000503139 AGRPO00253 132 aa11.84□□□□□ -0.51
EXOSC9-203ENST00000503139 ITGAVP06756 1048 aa11.84□□□□□ -0.51
EXOSC9-203ENST00000503139 SNW1Q13573 536 aaKnown RBP11.84□□□□□ -0.51
EXOSC9-203ENST00000503139 SFRP5Q5T4F7 317 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms