RNA–Protein interactions for RNA: ENST00000498544.5

ECHDC2-220, Transcript of enoyl-CoA hydratase domain containing 2, humanhuman

TSL 2

Gene ECHDC2, Length 985 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC2-220ENST00000498544 IGF2BP3O00425 579 aaKnown RBP eCLIP20.74■□□□□ 0.91
ECHDC2-220ENST00000498544 HMGB1P09429 215 aaKnown RBP20.74■□□□□ 0.91
ECHDC2-220ENST00000498544 MCM5P33992 734 aa20.74■□□□□ 0.91
ECHDC2-220ENST00000498544 SART3Q15020 963 aaKnown RBP20.74■□□□□ 0.91
ECHDC2-220ENST00000498544 ZYXQ15942 572 aaKnown RBP20.74■□□□□ 0.91
ECHDC2-220ENST00000498544 CYB5R4Q7L1T6 521 aa20.74■□□□□ 0.91
ECHDC2-220ENST00000498544 ANKRD23Q86SG2 305 aa20.74■□□□□ 0.91
ECHDC2-220ENST00000498544 DGKHQ86XP1 1220 aa20.74■□□□□ 0.91
ECHDC2-220ENST00000498544 NEK1Q96PY6 1258 aa20.74■□□□□ 0.91
ECHDC2-220ENST00000498544 PTPN18Q99952 460 aa20.74■□□□□ 0.91
ECHDC2-220ENST00000498544 MTA3Q9BTC8 594 aa20.74■□□□□ 0.91
ECHDC2-220ENST00000498544 AGTPBP1Q9UPW5 1226 aa20.74■□□□□ 0.91
ECHDC2-220ENST00000498544 SLC45A1Q9Y2W3 748 aa20.74■□□□□ 0.91
ECHDC2-220ENST00000498544 WDR19Q8NEZ3 1342 aa20.74■□□□□ 0.91
ECHDC2-220ENST00000498544 A0A0G2JMZ2 1700 aa20.73■□□□□ 0.91
ECHDC2-220ENST00000498544 BTBD19C9JJ37 291 aa20.73■□□□□ 0.91
ECHDC2-220ENST00000498544 SLC34A2O95436 690 aa20.73■□□□□ 0.91
ECHDC2-220ENST00000498544 ALDH1A1P00352 501 aa20.73■□□□□ 0.91
ECHDC2-220ENST00000498544 ANAPC15P60006 121 aa20.73■□□□□ 0.91
ECHDC2-220ENST00000498544 RCSD1Q6JBY9 416 aa20.73■□□□□ 0.91
ECHDC2-220ENST00000498544 ENAHQ8N8S7 591 aaPredicted RBP20.73■□□□□ 0.91
ECHDC2-220ENST00000498544 GMCL1P1Q8NEA9 526 aa20.73■□□□□ 0.91
ECHDC2-220ENST00000498544 ZKSCAN3Q9BRR0 538 aa20.73■□□□□ 0.91
ECHDC2-220ENST00000498544 COL11A1P12107 1806 aaPredicted RBP20.72■□□□□ 0.91
ECHDC2-220ENST00000498544 TOP1P11387 765 aaKnown RBP20.72■□□□□ 0.91
ECHDC2-220ENST00000498544 VCAM1P19320 739 aa20.72■□□□□ 0.91
ECHDC2-220ENST00000498544 ANTXR2P58335 489 aa20.72■□□□□ 0.91
ECHDC2-220ENST00000498544 PABPC4Q13310 644 aaKnown RBP eCLIP20.72■□□□□ 0.91
ECHDC2-220ENST00000498544 DGKZQ13574 1117 aa20.72■□□□□ 0.91
ECHDC2-220ENST00000498544 ADCK5Q3MIX3 580 aa20.72■□□□□ 0.91
ECHDC2-220ENST00000498544 GPAT2Q6NUI2 795 aa20.72■□□□□ 0.91
ECHDC2-220ENST00000498544 LRRC47Q8N1G4 583 aaKnown RBP20.72■□□□□ 0.91
ECHDC2-220ENST00000498544 FAM43AQ8N2R8 423 aa20.72■□□□□ 0.91
ECHDC2-220ENST00000498544 ANKS1AQ92625 1134 aa20.72■□□□□ 0.91
ECHDC2-220ENST00000498544 ERICH2A1L162 156 aa20.71■□□□□ 0.91
ECHDC2-220ENST00000498544 PRC1O43663 620 aa20.71■□□□□ 0.91
ECHDC2-220ENST00000498544 PSMA5P28066 241 aa20.71■□□□□ 0.91
ECHDC2-220ENST00000498544 TREML2Q5T2D2 321 aa20.71■□□□□ 0.91
ECHDC2-220ENST00000498544 JAKMIP1Q96N16 626 aaKnown RBP20.71■□□□□ 0.91
ECHDC2-220ENST00000498544 TMEM47Q9BQJ4 181 aa20.71■□□□□ 0.91
ECHDC2-220ENST00000498544 F5H6K3 240 aa20.7■□□□□ 0.9
ECHDC2-220ENST00000498544 PDHXO00330 501 aa20.7■□□□□ 0.9
ECHDC2-220ENST00000498544 IFIT3O14879 490 aaKnown RBP20.7■□□□□ 0.9
ECHDC2-220ENST00000498544 WDR46O15213 610 aaKnown RBP20.7■□□□□ 0.9
ECHDC2-220ENST00000498544 CA12O43570 354 aa20.7■□□□□ 0.9
ECHDC2-220ENST00000498544 KLRC3Q07444 240 aa20.7■□□□□ 0.9
ECHDC2-220ENST00000498544 SEC23AQ15436 765 aa20.7■□□□□ 0.9
ECHDC2-220ENST00000498544 IL17RAQ96F46 866 aa20.7■□□□□ 0.9
ECHDC2-220ENST00000498544 TMEM87BQ96K49 555 aa20.7■□□□□ 0.9
ECHDC2-220ENST00000498544 BEGAINQ9BUH8 593 aa20.7■□□□□ 0.9
ECHDC2-220ENST00000498544 UPF2Q9HAU5 1272 aaKnown RBP20.7■□□□□ 0.9
ECHDC2-220ENST00000498544 SAGE1Q9NXZ1 904 aa20.7■□□□□ 0.9
ECHDC2-220ENST00000498544 PNMA3Q9UL41 463 aa20.7■□□□□ 0.9
ECHDC2-220ENST00000498544 MYH6P13533 1939 aa20.69■□□□□ 0.9
ECHDC2-220ENST00000498544 NDUFB10O96000 172 aa20.69■□□□□ 0.9
ECHDC2-220ENST00000498544 HOXA7P31268 230 aaPredicted RBP20.69■□□□□ 0.9
ECHDC2-220ENST00000498544 TMEM67Q5HYA8 995 aa20.69■□□□□ 0.9
ECHDC2-220ENST00000498544 KIAA1755Q5JYT7 1200 aa20.69■□□□□ 0.9
ECHDC2-220ENST00000498544 IFIT1BQ5T764 474 aaKnown RBP20.69■□□□□ 0.9
ECHDC2-220ENST00000498544 BLOC1S2Q6QNY1 142 aa20.69■□□□□ 0.9
ECHDC2-220ENST00000498544 DHX32Q7L7V1 743 aaKnown RBP20.69■□□□□ 0.9
ECHDC2-220ENST00000498544 CHST3Q7LGC8 479 aa20.69■□□□□ 0.9
ECHDC2-220ENST00000498544 SPICE1Q8N0Z3 855 aa20.69■□□□□ 0.9
ECHDC2-220ENST00000498544 CFHR5Q9BXR6 569 aa20.69■□□□□ 0.9
ECHDC2-220ENST00000498544 TM6SF1Q9BZW5 370 aa20.69■□□□□ 0.9
ECHDC2-220ENST00000498544 KAT14Q9H8E8 782 aa20.69■□□□□ 0.9
ECHDC2-220ENST00000498544 WBP1LQ9NX94 342 aa20.69■□□□□ 0.9
ECHDC2-220ENST00000498544 RAD21O60216 631 aa20.68■□□□□ 0.9
ECHDC2-220ENST00000498544 COL9A3Q14050 684 aaPredicted RBP20.68■□□□□ 0.9
ECHDC2-220ENST00000498544 WTAPQ15007 396 aa20.68■□□□□ 0.9
ECHDC2-220ENST00000498544 IGDCC4Q8TDY8 1250 aa20.68■□□□□ 0.9
ECHDC2-220ENST00000498544 GMCL1Q96IK5 515 aa20.68■□□□□ 0.9
ECHDC2-220ENST00000498544 PARK7Q99497 189 aaKnown RBP20.68■□□□□ 0.9
ECHDC2-220ENST00000498544 BACH2Q9BYV9 841 aa20.68■□□□□ 0.9
ECHDC2-220ENST00000498544 RPAP3Q9H6T3 665 aaPredicted RBP20.68■□□□□ 0.9
ECHDC2-220ENST00000498544 MGAMO43451 1857 aa20.67■□□□□ 0.9
ECHDC2-220ENST00000498544 USP17L15C9J2P7 530 aa20.67■□□□□ 0.9
ECHDC2-220ENST00000498544 USP17L13C9JLJ4 530 aa20.67■□□□□ 0.9
ECHDC2-220ENST00000498544 USP17L11C9JVI0 530 aa20.67■□□□□ 0.9
ECHDC2-220ENST00000498544 USP17L18D6R9N7 530 aa20.67■□□□□ 0.9
ECHDC2-220ENST00000498544 USP17L22D6RA61 530 aa20.67■□□□□ 0.9
ECHDC2-220ENST00000498544 USP17L17D6RBQ6 530 aa20.67■□□□□ 0.9
ECHDC2-220ENST00000498544 USP17L19D6RCP7 530 aa20.67■□□□□ 0.9
ECHDC2-220ENST00000498544 USP17L20D6RJB6 530 aa20.67■□□□□ 0.9
ECHDC2-220ENST00000498544 HSPA1AP0DMV8 641 aaKnown RBP20.67■□□□□ 0.9
ECHDC2-220ENST00000498544 HSPA1BP0DMV9 641 aaKnown RBP20.67■□□□□ 0.9
ECHDC2-220ENST00000498544 CASTP20810 708 aaKnown RBP20.67■□□□□ 0.9
ECHDC2-220ENST00000498544 IRX3P78415 501 aaPredicted RBP20.67■□□□□ 0.9
ECHDC2-220ENST00000498544 EXOSC10Q01780 885 aaKnown RBP20.67■□□□□ 0.9
ECHDC2-220ENST00000498544 USP17L24Q0WX57 530 aa20.67■□□□□ 0.9
ECHDC2-220ENST00000498544 TAF1CQ15572 869 aaPredicted RBP20.67■□□□□ 0.9
ECHDC2-220ENST00000498544 PNMA1Q8ND90 353 aa20.67■□□□□ 0.9
ECHDC2-220ENST00000498544 RNF186Q9NXI6 227 aa20.67■□□□□ 0.9
ECHDC2-220ENST00000498544 SH2B2O14492 632 aaPredicted RBP20.66■□□□□ 0.9
ECHDC2-220ENST00000498544 OSBPP22059 807 aa20.66■□□□□ 0.9
ECHDC2-220ENST00000498544 RPS6KB1P23443 525 aa20.66■□□□□ 0.9
ECHDC2-220ENST00000498544 LIFRP42702 1097 aa20.66■□□□□ 0.9
ECHDC2-220ENST00000498544 SLFN13Q68D06 897 aa20.66■□□□□ 0.9
ECHDC2-220ENST00000498544 TMTC2Q8N394 836 aa20.66■□□□□ 0.9
ECHDC2-220ENST00000498544 DCAF4Q8WV16 495 aa20.66■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms