RNA–Protein interactions for RNA: ENST00000498160.5

CTDSP1-215, Transcript of CTD small phosphatase 1, humanhuman

TSL 5

Gene CTDSP1, Length 877 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-215ENST00000498160 SH3D19Q5HYK7 790 aa20.57■□□□□ 0.88
CTDSP1-215ENST00000498160 SPRYD7Q5W111 196 aa20.57■□□□□ 0.88
CTDSP1-215ENST00000498160 RCSD1Q6JBY9 416 aa20.57■□□□□ 0.88
CTDSP1-215ENST00000498160 CATIPQ7Z7H3 387 aa20.57■□□□□ 0.88
CTDSP1-215ENST00000498160 REM2Q8IYK8 340 aaPredicted RBP20.57■□□□□ 0.88
CTDSP1-215ENST00000498160 MAP3K14Q99558 947 aa20.57■□□□□ 0.88
CTDSP1-215ENST00000498160 TMEM47Q9BQJ4 181 aa20.57■□□□□ 0.88
CTDSP1-215ENST00000498160 NMT2O60551 498 aa20.56■□□□□ 0.88
CTDSP1-215ENST00000498160 SLC10A3P09131 477 aa20.56■□□□□ 0.88
CTDSP1-215ENST00000498160 FASTKD5Q7L8L6 764 aaKnown RBP20.56■□□□□ 0.88
CTDSP1-215ENST00000498160 CHST3Q7LGC8 479 aa20.56■□□□□ 0.88
CTDSP1-215ENST00000498160 RASAL3Q86YV0 1011 aa20.56■□□□□ 0.88
CTDSP1-215ENST00000498160 PROCA1Q8NCQ7 364 aaPredicted RBP20.56■□□□□ 0.88
CTDSP1-215ENST00000498160 PNMA1Q8ND90 353 aa20.56■□□□□ 0.88
CTDSP1-215ENST00000498160 C12orf42Q96LP6 360 aa20.56■□□□□ 0.88
CTDSP1-215ENST00000498160 VCPKMTQ9H867 229 aa20.56■□□□□ 0.88
CTDSP1-215ENST00000498160 SLC12A7Q9Y666 1083 aa20.56■□□□□ 0.88
CTDSP1-215ENST00000498160 MANSC4A6NHS7 340 aaPredicted RBP20.55■□□□□ 0.88
CTDSP1-215ENST00000498160 IRF6O14896 467 aa20.55■□□□□ 0.88
CTDSP1-215ENST00000498160 CETPP11597 493 aa20.55■□□□□ 0.88
CTDSP1-215ENST00000498160 INHBEP58166 350 aa20.55■□□□□ 0.88
CTDSP1-215ENST00000498160 DEFB115Q30KQ5 88 aa20.55■□□□□ 0.88
CTDSP1-215ENST00000498160 DCAF4Q8WV16 495 aa20.55■□□□□ 0.88
CTDSP1-215ENST00000498160 A0A0G2JLL6 359 aaPredicted RBP20.54■□□□□ 0.88
CTDSP1-215ENST00000498160 TRIM75PA6NK02 468 aa20.54■□□□□ 0.88
CTDSP1-215ENST00000498160 WDR46O15213 610 aaKnown RBP20.54■□□□□ 0.88
CTDSP1-215ENST00000498160 KIF5BP33176 963 aa20.54■□□□□ 0.88
CTDSP1-215ENST00000498160 EVCP57679 992 aa20.54■□□□□ 0.88
CTDSP1-215ENST00000498160 C1QTNF8P60827 252 aa20.54■□□□□ 0.88
CTDSP1-215ENST00000498160 PABPC4Q13310 644 aaKnown RBP eCLIP20.54■□□□□ 0.88
CTDSP1-215ENST00000498160 MTMR2Q13614 643 aa20.54■□□□□ 0.88
CTDSP1-215ENST00000498160 SHROOM1Q2M3G4 852 aaPredicted RBP20.54■□□□□ 0.88
CTDSP1-215ENST00000498160 PRRT2Q7Z6L0 340 aaPredicted RBP20.54■□□□□ 0.88
CTDSP1-215ENST00000498160 SIAH1Q8IUQ4 282 aa20.54■□□□□ 0.88
CTDSP1-215ENST00000498160 BRF1Q92994 677 aa20.54■□□□□ 0.88
CTDSP1-215ENST00000498160 GMCL1Q96IK5 515 aa20.54■□□□□ 0.88
CTDSP1-215ENST00000498160 CPA1P15085 419 aa20.53■□□□□ 0.88
CTDSP1-215ENST00000498160 NOGQ13253 232 aa20.53■□□□□ 0.88
CTDSP1-215ENST00000498160 GPATCH4Q5T3I0 446 aaKnown RBP20.53■□□□□ 0.88
CTDSP1-215ENST00000498160 CLEC10AQ8IUN9 316 aa20.53■□□□□ 0.88
CTDSP1-215ENST00000498160 ZNF654Q8IZM8 581 aa20.53■□□□□ 0.88
CTDSP1-215ENST00000498160 NKX2-3Q8TAU0 364 aa20.53■□□□□ 0.88
CTDSP1-215ENST00000498160 ACER1Q8TDN7 264 aa20.53■□□□□ 0.88
CTDSP1-215ENST00000498160 ZNF274Q96GC6 653 aaPredicted RBP20.53■□□□□ 0.88
CTDSP1-215ENST00000498160 ZSCAN31Q96LW9 406 aaPredicted RBP20.53■□□□□ 0.88
CTDSP1-215ENST00000498160 LRRC2Q9BYS8 371 aa20.53■□□□□ 0.88
CTDSP1-215ENST00000498160 CCDC196A0A1B0GTZ2 297 aa20.52■□□□□ 0.88
CTDSP1-215ENST00000498160 A0A1W2PRG0 241 aa20.52■□□□□ 0.88
CTDSP1-215ENST00000498160 F5H6K3 240 aa20.52■□□□□ 0.88
CTDSP1-215ENST00000498160 HSPA6P17066 643 aa20.52■□□□□ 0.88
CTDSP1-215ENST00000498160 GNAQP50148 359 aa20.52■□□□□ 0.88
CTDSP1-215ENST00000498160 AK2P54819 239 aa20.52■□□□□ 0.88
CTDSP1-215ENST00000498160 KLRC3Q07444 240 aa20.52■□□□□ 0.88
CTDSP1-215ENST00000498160 SREBF2Q12772 1141 aa20.52■□□□□ 0.88
CTDSP1-215ENST00000498160 ASPRV1Q53RT3 343 aa20.52■□□□□ 0.88
CTDSP1-215ENST00000498160 SLFN13Q68D06 897 aa20.52■□□□□ 0.88
CTDSP1-215ENST00000498160 APOA5Q6Q788 366 aa20.52■□□□□ 0.88
CTDSP1-215ENST00000498160 LRRC47Q8N1G4 583 aaKnown RBP20.52■□□□□ 0.88
CTDSP1-215ENST00000498160 CTCFLQ8NI51 663 aaPredicted RBP20.52■□□□□ 0.88
CTDSP1-215ENST00000498160 TCEANC2Q96MN5 208 aa20.52■□□□□ 0.88
CTDSP1-215ENST00000498160 ZCCHC17Q9NP64 241 aaKnown RBP20.52■□□□□ 0.88
CTDSP1-215ENST00000498160 NID2Q14112 1375 aa20.51■□□□□ 0.87
CTDSP1-215ENST00000498160 KLF18A0A0U1RQI7 1052 aa20.51■□□□□ 0.87
CTDSP1-215ENST00000498160 ZBTB43O43298 467 aa20.51■□□□□ 0.87
CTDSP1-215ENST00000498160 SNHG28P0DPA3 235 aa20.51■□□□□ 0.87
CTDSP1-215ENST00000498160 SLC1A4P43007 532 aa20.51■□□□□ 0.87
CTDSP1-215ENST00000498160 TOB2Q14106 344 aaPredicted RBP20.51■□□□□ 0.87
CTDSP1-215ENST00000498160 PAXIP1Q6ZW49 1069 aaPredicted RBP20.51■□□□□ 0.87
CTDSP1-215ENST00000498160 LZTS2Q9BRK4 669 aa20.51■□□□□ 0.87
CTDSP1-215ENST00000498160 SH2B1Q9NRF2 756 aaPredicted RBP20.51■□□□□ 0.87
CTDSP1-215ENST00000498160 RBM28Q9NW13 759 aaKnown RBP20.51■□□□□ 0.87
CTDSP1-215ENST00000498160 FRMD4AQ9P2Q2 1039 aaPredicted RBP20.51■□□□□ 0.87
CTDSP1-215ENST00000498160 LIMCH1Q9UPQ0 1083 aa20.51■□□□□ 0.87
CTDSP1-215ENST00000498160 SLC45A1Q9Y2W3 748 aa20.51■□□□□ 0.87
CTDSP1-215ENST00000498160 LOC285556D6RIA3 1793 aa20.51■□□□□ 0.87
CTDSP1-215ENST00000498160 PTPRFP10586 1907 aa20.51■□□□□ 0.87
CTDSP1-215ENST00000498160 DHX16O60231 1041 aaKnown RBP20.5■□□□□ 0.87
CTDSP1-215ENST00000498160 PLA2G6O60733 806 aa20.5■□□□□ 0.87
CTDSP1-215ENST00000498160 NDUFB10O96000 172 aa20.5■□□□□ 0.87
CTDSP1-215ENST00000498160 PARP1P09874 1014 aaKnown RBP20.5■□□□□ 0.87
CTDSP1-215ENST00000498160 HMGCS2P54868 508 aa20.5■□□□□ 0.87
CTDSP1-215ENST00000498160 TROAPQ12815 778 aa20.5■□□□□ 0.87
CTDSP1-215ENST00000498160 OTUD7BQ6GQQ9 843 aa20.5■□□□□ 0.87
CTDSP1-215ENST00000498160 CCDC84Q86UT8 332 aaPredicted RBP20.5■□□□□ 0.87
CTDSP1-215ENST00000498160 CNKSR2Q8WXI2 1034 aa20.5■□□□□ 0.87
CTDSP1-215ENST00000498160 ZBTB4Q9P1Z0 1013 aaPredicted RBP20.5■□□□□ 0.87
CTDSP1-215ENST00000498160 TESPA1A2RU30 521 aaPredicted RBP20.49■□□□□ 0.87
CTDSP1-215ENST00000498160 FAM155AB1AL88 458 aaPredicted RBP20.49■□□□□ 0.87
CTDSP1-215ENST00000498160 RAD21O60216 631 aa20.49■□□□□ 0.87
CTDSP1-215ENST00000498160 PDHBP11177 359 aa20.49■□□□□ 0.87
CTDSP1-215ENST00000498160 BMP3P12645 472 aa20.49■□□□□ 0.87
CTDSP1-215ENST00000498160 GJA5P36382 358 aa20.49■□□□□ 0.87
CTDSP1-215ENST00000498160 FAM160B2Q86V87 743 aa20.49■□□□□ 0.87
CTDSP1-215ENST00000498160 CHURC1Q8WUH1 139 aa20.49■□□□□ 0.87
CTDSP1-215ENST00000498160 CAPNS2Q96L46 248 aa20.49■□□□□ 0.87
CTDSP1-215ENST00000498160 EMILIN3Q9NT22 766 aa20.49■□□□□ 0.87
CTDSP1-215ENST00000498160 PNMA3Q9UL41 463 aa20.49■□□□□ 0.87
CTDSP1-215ENST00000498160 AGTPBP1Q9UPW5 1226 aa20.49■□□□□ 0.87
CTDSP1-215ENST00000498160 MYPNQ86TC9 1320 aa20.49■□□□□ 0.87
CTDSP1-215ENST00000498160 CCL15-CCL14A0A0B4J2E2 113 aa20.48■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 111.8 ms