RNA–Protein interactions for RNA: ENST00000497964.1

MACF1-226, Transcript of microtubule-actin crosslinking factor 1, humanhuman

TSL 2

Gene MACF1, Length 4,160 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MACF1-226ENST00000497964 COL9A3Q14050 684 aaPredicted RBP8.03□□□□□ -1.12
MACF1-226ENST00000497964 B4GALNT4Q76KP1 1039 aa8.03□□□□□ -1.12
MACF1-226ENST00000497964 CAPS2Q9BXY5 557 aa8.03□□□□□ -1.12
MACF1-226ENST00000497964 RBM28Q9NW13 759 aaKnown RBP8.03□□□□□ -1.12
MACF1-226ENST00000497964 TBC1D7Q9P0N9 293 aa8.03□□□□□ -1.12
MACF1-226ENST00000497964 CCNT1O60563 726 aaKnown RBP8.03□□□□□ -1.12
MACF1-226ENST00000497964 BAG3O95817 575 aa8.03□□□□□ -1.12
MACF1-226ENST00000497964 NBPF14Q5TI25 921 aa8.03□□□□□ -1.12
MACF1-226ENST00000497964 CCDC91Q7Z6B0 441 aa8.03□□□□□ -1.12
MACF1-226ENST00000497964 LRRN4CLQ8ND94 238 aa8.03□□□□□ -1.12
MACF1-226ENST00000497964 TSGA10Q9BZW7 698 aa8.03□□□□□ -1.12
MACF1-226ENST00000497964 B4DLN1 442 aa8.03□□□□□ -1.12
MACF1-226ENST00000497964 E7EVH7 732 aa8.03□□□□□ -1.12
MACF1-226ENST00000497964 SH2B2O14492 632 aaPredicted RBP8.03□□□□□ -1.12
MACF1-226ENST00000497964 PDE8AO60658 829 aa8.03□□□□□ -1.12
MACF1-226ENST00000497964 ADAMTS2O95450 1211 aa8.03□□□□□ -1.12
MACF1-226ENST00000497964 MMP1P03956 469 aa8.03□□□□□ -1.12
MACF1-226ENST00000497964 CDC27P30260 824 aa8.03□□□□□ -1.12
MACF1-226ENST00000497964 TNNC1P63316 161 aa8.03□□□□□ -1.12
MACF1-226ENST00000497964 UBE4AQ14139 1066 aa8.03□□□□□ -1.12
MACF1-226ENST00000497964 SV2BQ7L1I2 683 aa8.03□□□□□ -1.12
MACF1-226ENST00000497964 ENGASEQ8NFI3 743 aa8.03□□□□□ -1.12
MACF1-226ENST00000497964 RASGRP4Q8TDF6 673 aa8.03□□□□□ -1.12
MACF1-226ENST00000497964 GPKOWQ92917 476 aaPredicted RBP eCLIP8.03□□□□□ -1.12
MACF1-226ENST00000497964 CABS1Q96KC9 395 aa8.03□□□□□ -1.12
MACF1-226ENST00000497964 GSDMAQ96QA5 445 aa8.03□□□□□ -1.12
MACF1-226ENST00000497964 C6orf50Q9HD87 102 aa8.03□□□□□ -1.12
MACF1-226ENST00000497964 CEP104O60308 925 aa8.02□□□□□ -1.13
MACF1-226ENST00000497964 EZRP15311 586 aaKnown RBP8.02□□□□□ -1.13
MACF1-226ENST00000497964 DCAF17Q5H9S7 520 aaPredicted RBP8.02□□□□□ -1.13
MACF1-226ENST00000497964 MSL1Q68DK7 614 aa8.02□□□□□ -1.13
MACF1-226ENST00000497964 CCDC25Q86WR0 208 aa8.02□□□□□ -1.13
MACF1-226ENST00000497964 IFT20Q8IY31 132 aa8.02□□□□□ -1.13
MACF1-226ENST00000497964 GSPT2Q8IYD1 628 aaKnown RBP8.02□□□□□ -1.13
MACF1-226ENST00000497964 NOX5Q96PH1 765 aa8.02□□□□□ -1.13
MACF1-226ENST00000497964 SUGCTQ9HAC7 445 aa8.02□□□□□ -1.13
MACF1-226ENST00000497964 PTPRMP28827 1452 aa8.02□□□□□ -1.13
MACF1-226ENST00000497964 GCOM1H8Y6P7 765 aaPredicted RBP8.02□□□□□ -1.13
MACF1-226ENST00000497964 PDE8BO95263 885 aa8.02□□□□□ -1.13
MACF1-226ENST00000497964 RPN1P04843 607 aaKnown RBP8.02□□□□□ -1.13
MACF1-226ENST00000497964 MYZAPP0CAP1 466 aa8.02□□□□□ -1.13
MACF1-226ENST00000497964 FDPSP14324 419 aaKnown RBP8.02□□□□□ -1.13
MACF1-226ENST00000497964 IFNAR1P17181 557 aa8.02□□□□□ -1.13
MACF1-226ENST00000497964 CALRP27797 417 aaKnown RBP8.02□□□□□ -1.13
MACF1-226ENST00000497964 ATP6V1AP38606 617 aa8.02□□□□□ -1.13
MACF1-226ENST00000497964 SLC7A5Q01650 507 aa8.02□□□□□ -1.13
MACF1-226ENST00000497964 EXOSC10Q01780 885 aaKnown RBP8.02□□□□□ -1.13
MACF1-226ENST00000497964 IFI16Q16666 785 aaKnown RBP8.02□□□□□ -1.13
MACF1-226ENST00000497964 INF2Q27J81 1249 aa8.02□□□□□ -1.13
MACF1-226ENST00000497964 RESP18Q5W5W9 173 aa8.02□□□□□ -1.13
MACF1-226ENST00000497964 CYB5R4Q7L1T6 521 aa8.02□□□□□ -1.13
MACF1-226ENST00000497964 TBC1D10CQ8IV04 446 aa8.02□□□□□ -1.13
MACF1-226ENST00000497964 CCDC24Q8N4L8 307 aa8.02□□□□□ -1.13
MACF1-226ENST00000497964 NUP58Q9BVL2 599 aa8.02□□□□□ -1.13
MACF1-226ENST00000497964 ZNF609O15014 1411 aa8.02□□□□□ -1.13
MACF1-226ENST00000497964 USP42Q9H9J4 1324 aaKnown RBP8.02□□□□□ -1.13
MACF1-226ENST00000497964 H7C1D1 291 aa8.02□□□□□ -1.13
MACF1-226ENST00000497964 ADD2P35612 726 aa8.02□□□□□ -1.13
MACF1-226ENST00000497964 DNM2P50570 870 aa8.02□□□□□ -1.13
MACF1-226ENST00000497964 C2orf54Q08AI8 447 aa8.02□□□□□ -1.13
MACF1-226ENST00000497964 SCARF1Q14162 830 aa8.02□□□□□ -1.13
MACF1-226ENST00000497964 METTL16Q86W50 562 aaKnown RBP8.02□□□□□ -1.13
MACF1-226ENST00000497964 NELFCDQ8IXH7 590 aa8.02□□□□□ -1.13
MACF1-226ENST00000497964 SYNE4Q8N205 404 aa8.02□□□□□ -1.13
MACF1-226ENST00000497964 CRACR2BQ8N4Y2 399 aaPredicted RBP8.02□□□□□ -1.13
MACF1-226ENST00000497964 FOXP1Q9H334 677 aaPredicted RBP8.02□□□□□ -1.13
MACF1-226ENST00000497964 GPR108Q9NPR9 543 aa8.02□□□□□ -1.13
MACF1-226ENST00000497964 ZKSCAN7Q9P0L1 754 aaPredicted RBP8.02□□□□□ -1.13
MACF1-226ENST00000497964 JRKLQ9Y4A0 524 aa8.02□□□□□ -1.13
MACF1-226ENST00000497964 ADGRG1Q9Y653 693 aa8.02□□□□□ -1.13
MACF1-226ENST00000497964 MYO3AQ8NEV4 1616 aa8.02□□□□□ -1.13
MACF1-226ENST00000497964 MFAP3LO75121 409 aa8.01□□□□□ -1.13
MACF1-226ENST00000497964 NDUFA10O95299 355 aa8.01□□□□□ -1.13
MACF1-226ENST00000497964 FMNL1O95466 1100 aaPredicted RBP8.01□□□□□ -1.13
MACF1-226ENST00000497964 PARP1P09874 1014 aaKnown RBP8.01□□□□□ -1.13
MACF1-226ENST00000497964 PLA2G4AP47712 749 aa8.01□□□□□ -1.13
MACF1-226ENST00000497964 KRT31Q15323 416 aa8.01□□□□□ -1.13
MACF1-226ENST00000497964 UBE3CQ15386 1083 aa8.01□□□□□ -1.13
MACF1-226ENST00000497964 CFAP221Q4G0U5 840 aa8.01□□□□□ -1.13
MACF1-226ENST00000497964 CADPS2Q86UW7 1296 aa8.01□□□□□ -1.13
MACF1-226ENST00000497964 RPGRIP1Q96KN7 1286 aa8.01□□□□□ -1.13
MACF1-226ENST00000497964 PAIP2Q9BPZ3 127 aaKnown RBP8.01□□□□□ -1.13
MACF1-226ENST00000497964 BPIFA3Q9BQP9 254 aa8.01□□□□□ -1.13
MACF1-226ENST00000497964 TUBGCP2Q9BSJ2 902 aa8.01□□□□□ -1.13
MACF1-226ENST00000497964 ALDH8A1Q9H2A2 487 aaPredicted RBP8.01□□□□□ -1.13
MACF1-226ENST00000497964 SAP30BPQ9UHR5 308 aaKnown RBP8.01□□□□□ -1.13
MACF1-226ENST00000497964 MRFAP1Q9Y605 127 aa8.01□□□□□ -1.13
MACF1-226ENST00000497964 ALKQ9UM73 1620 aa8.01□□□□□ -1.13
MACF1-226ENST00000497964 REREQ9P2R6 1566 aa8.01□□□□□ -1.13
MACF1-226ENST00000497964 CPS1P31327 1500 aa8.01□□□□□ -1.13
MACF1-226ENST00000497964 MED23Q9ULK4 1368 aa8.01□□□□□ -1.13
MACF1-226ENST00000497964 TMEM110-MUSTN1A8MSY1 372 aa8.01□□□□□ -1.13
MACF1-226ENST00000497964 PTPREP23469 700 aa8.01□□□□□ -1.13
MACF1-226ENST00000497964 ARID4AP29374 1257 aaPredicted RBP8.01□□□□□ -1.13
MACF1-226ENST00000497964 GYG1P46976 350 aa8.01□□□□□ -1.13
MACF1-226ENST00000497964 VSNL1P62760 191 aa8.01□□□□□ -1.13
MACF1-226ENST00000497964 SLC9C1Q4G0N8 1177 aa8.01□□□□□ -1.13
MACF1-226ENST00000497964 CEP85LQ5SZL2 805 aa8.01□□□□□ -1.13
MACF1-226ENST00000497964 USPL1Q5W0Q7 1092 aa8.01□□□□□ -1.13
MACF1-226ENST00000497964 CABP7Q86V35 215 aa8.01□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms