RNA–Protein interactions for RNA: ENST00000497470.1

SCAMP3-209, Transcript of secretory carrier membrane protein 3, humanhuman

TSL 5

Gene SCAMP3, Length 845 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP3-209ENST00000497470 CATIPQ7Z7H3 387 aa23.11■■□□□ 1.29
SCAMP3-209ENST00000497470 PNMA1Q8ND90 353 aa23.11■■□□□ 1.29
SCAMP3-209ENST00000497470 CLMNQ96JQ2 1002 aa23.11■■□□□ 1.29
SCAMP3-209ENST00000497470 ZKSCAN3Q9BRR0 538 aa23.11■■□□□ 1.29
SCAMP3-209ENST00000497470 VCPKMTQ9H867 229 aa23.11■■□□□ 1.29
SCAMP3-209ENST00000497470 LIMCH1Q9UPQ0 1083 aa23.11■■□□□ 1.29
SCAMP3-209ENST00000497470 A0A1W2PRG0 241 aa23.1■■□□□ 1.29
SCAMP3-209ENST00000497470 RASSF10A6NK89 507 aa23.1■■□□□ 1.29
SCAMP3-209ENST00000497470 PLA2G6O60733 806 aa23.1■■□□□ 1.29
SCAMP3-209ENST00000497470 CPA1P15085 419 aa23.1■■□□□ 1.29
SCAMP3-209ENST00000497470 AK2P54819 239 aa23.1■■□□□ 1.29
SCAMP3-209ENST00000497470 SHROOM1Q2M3G4 852 aaPredicted RBP23.1■■□□□ 1.29
SCAMP3-209ENST00000497470 APOA5Q6Q788 366 aa23.1■■□□□ 1.29
SCAMP3-209ENST00000497470 USP17L2Q6R6M4 530 aa23.1■■□□□ 1.29
SCAMP3-209ENST00000497470 PROCA1Q8NCQ7 364 aaPredicted RBP23.1■■□□□ 1.29
SCAMP3-209ENST00000497470 BRF1Q92994 677 aa23.1■■□□□ 1.29
SCAMP3-209ENST00000497470 OPTNQ96CV9 577 aa23.1■■□□□ 1.29
SCAMP3-209ENST00000497470 SH2B1Q9NRF2 756 aaPredicted RBP23.1■■□□□ 1.29
SCAMP3-209ENST00000497470 SLC12A7Q9Y666 1083 aa23.1■■□□□ 1.29
SCAMP3-209ENST00000497470 SMARCA1P28370 1054 aa23.09■■□□□ 1.29
SCAMP3-209ENST00000497470 INHBEP58166 350 aa23.09■■□□□ 1.29
SCAMP3-209ENST00000497470 SPP2Q13103 211 aa23.09■■□□□ 1.29
SCAMP3-209ENST00000497470 SPRYD7Q5W111 196 aa23.09■■□□□ 1.29
SCAMP3-209ENST00000497470 ZNF654Q8IZM8 581 aa23.09■■□□□ 1.29
SCAMP3-209ENST00000497470 DCAF4Q8WV16 495 aa23.09■■□□□ 1.29
SCAMP3-209ENST00000497470 WNK4Q96J92 1243 aa23.09■■□□□ 1.29
SCAMP3-209ENST00000497470 ELP3Q9H9T3 547 aa23.09■■□□□ 1.29
SCAMP3-209ENST00000497470 A0A0G2JLL6 359 aaPredicted RBP23.08■■□□□ 1.29
SCAMP3-209ENST00000497470 CCDC196A0A1B0GTZ2 297 aa23.08■■□□□ 1.29
SCAMP3-209ENST00000497470 F5H6K3 240 aa23.08■■□□□ 1.29
SCAMP3-209ENST00000497470 GTF2A2P52657 109 aa23.08■■□□□ 1.29
SCAMP3-209ENST00000497470 KLRC3Q07444 240 aa23.08■■□□□ 1.29
SCAMP3-209ENST00000497470 SNAPC2Q13487 334 aa23.08■■□□□ 1.29
SCAMP3-209ENST00000497470 GPATCH4Q5T3I0 446 aaKnown RBP23.08■■□□□ 1.29
SCAMP3-209ENST00000497470 FASTKD5Q7L8L6 764 aaKnown RBP23.08■■□□□ 1.29
SCAMP3-209ENST00000497470 PRRT2Q7Z6L0 340 aaPredicted RBP23.08■■□□□ 1.29
SCAMP3-209ENST00000497470 REM2Q8IYK8 340 aaPredicted RBP23.08■■□□□ 1.29
SCAMP3-209ENST00000497470 TESPA1A2RU30 521 aaPredicted RBP23.07■■□□□ 1.28
SCAMP3-209ENST00000497470 IRF6O14896 467 aa23.07■■□□□ 1.28
SCAMP3-209ENST00000497470 WDR46O15213 610 aaKnown RBP23.07■■□□□ 1.28
SCAMP3-209ENST00000497470 SLC10A3P09131 477 aa23.07■■□□□ 1.28
SCAMP3-209ENST00000497470 KIF5BP33176 963 aa23.07■■□□□ 1.28
SCAMP3-209ENST00000497470 GNAQP50148 359 aa23.07■■□□□ 1.28
SCAMP3-209ENST00000497470 ASPRV1Q53RT3 343 aa23.07■■□□□ 1.28
SCAMP3-209ENST00000497470 NFXL1Q6ZNB6 911 aa23.07■■□□□ 1.28
SCAMP3-209ENST00000497470 ACER1Q8TDN7 264 aa23.07■■□□□ 1.28
SCAMP3-209ENST00000497470 TCEANC2Q96MN5 208 aa23.07■■□□□ 1.28
SCAMP3-209ENST00000497470 LZTS2Q9BRK4 669 aa23.07■■□□□ 1.28
SCAMP3-209ENST00000497470 ZCCHC17Q9NP64 241 aaKnown RBP23.07■■□□□ 1.28
SCAMP3-209ENST00000497470 MYH4Q9Y623 1939 aa23.06■■□□□ 1.28
SCAMP3-209ENST00000497470 PDHBP11177 359 aa23.06■■□□□ 1.28
SCAMP3-209ENST00000497470 ECE1P42892 770 aa23.06■■□□□ 1.28
SCAMP3-209ENST00000497470 RASAL3Q86YV0 1011 aa23.06■■□□□ 1.28
SCAMP3-209ENST00000497470 OTUD5Q96G74 571 aa23.06■■□□□ 1.28
SCAMP3-209ENST00000497470 FEZ1Q99689 392 aa23.06■■□□□ 1.28
SCAMP3-209ENST00000497470 LRRC2Q9BYS8 371 aa23.06■■□□□ 1.28
SCAMP3-209ENST00000497470 RBM28Q9NW13 759 aaKnown RBP23.06■■□□□ 1.28
SCAMP3-209ENST00000497470 SLC45A1Q9Y2W3 748 aa23.06■■□□□ 1.28
SCAMP3-209ENST00000497470 KLF18A0A0U1RQI7 1052 aa23.05■■□□□ 1.28
SCAMP3-209ENST00000497470 ZBTB43O43298 467 aa23.05■■□□□ 1.28
SCAMP3-209ENST00000497470 DHX16O60231 1041 aaKnown RBP23.05■■□□□ 1.28
SCAMP3-209ENST00000497470 CETPP11597 493 aa23.05■■□□□ 1.28
SCAMP3-209ENST00000497470 PDIA3P30101 505 aaKnown RBP23.05■■□□□ 1.28
SCAMP3-209ENST00000497470 ZNF157P51786 506 aaPredicted RBP23.05■■□□□ 1.28
SCAMP3-209ENST00000497470 GPHNQ9NQX3 736 aaPredicted RBP23.05■■□□□ 1.28
SCAMP3-209ENST00000497470 EMILIN3Q9NT22 766 aa23.05■■□□□ 1.28
SCAMP3-209ENST00000497470 TMOD4Q9NZQ9 345 aa23.05■■□□□ 1.28
SCAMP3-209ENST00000497470 BRPF3Q9ULD4 1205 aa23.05■■□□□ 1.28
SCAMP3-209ENST00000497470 ABT1Q9ULW3 272 aaKnown RBP23.05■■□□□ 1.28
SCAMP3-209ENST00000497470 MYPNQ86TC9 1320 aa23.05■■□□□ 1.28
SCAMP3-209ENST00000497470 MANSC4A6NHS7 340 aaPredicted RBP23.04■■□□□ 1.28
SCAMP3-209ENST00000497470 PFKFB2O60825 505 aa23.04■■□□□ 1.28
SCAMP3-209ENST00000497470 NDUFB10O96000 172 aa23.04■■□□□ 1.28
SCAMP3-209ENST00000497470 HOXA7P31268 230 aaPredicted RBP23.04■■□□□ 1.28
SCAMP3-209ENST00000497470 ATP2B2Q01814 1243 aa23.04■■□□□ 1.28
SCAMP3-209ENST00000497470 MTMR2Q13614 643 aa23.04■■□□□ 1.28
SCAMP3-209ENST00000497470 GRM4Q14833 912 aa23.04■■□□□ 1.28
SCAMP3-209ENST00000497470 SLFN13Q68D06 897 aa23.04■■□□□ 1.28
SCAMP3-209ENST00000497470 BTNL9Q6UXG8 535 aa23.04■■□□□ 1.28
SCAMP3-209ENST00000497470 CLEC10AQ8IUN9 316 aa23.04■■□□□ 1.28
SCAMP3-209ENST00000497470 FANCBQ8NB91 859 aa23.04■■□□□ 1.28
SCAMP3-209ENST00000497470 MS4A4AQ96JQ5 239 aa23.04■■□□□ 1.28
SCAMP3-209ENST00000497470 SENP2Q9HC62 589 aa23.04■■□□□ 1.28
SCAMP3-209ENST00000497470 TPCN1Q9ULQ1 816 aa23.04■■□□□ 1.28
SCAMP3-209ENST00000497470 PALM3A6NDB9 673 aaPredicted RBP23.03■■□□□ 1.28
SCAMP3-209ENST00000497470 FDX1P10109 184 aa23.03■■□□□ 1.28
SCAMP3-209ENST00000497470 GJA5P36382 358 aa23.03■■□□□ 1.28
SCAMP3-209ENST00000497470 ZNF543Q08ER8 600 aa23.03■■□□□ 1.28
SCAMP3-209ENST00000497470 APOBRQ0VD83 1088 aa23.03■■□□□ 1.28
SCAMP3-209ENST00000497470 DEFB115Q30KQ5 88 aa23.03■■□□□ 1.28
SCAMP3-209ENST00000497470 CTCFLQ8NI51 663 aaPredicted RBP23.03■■□□□ 1.28
SCAMP3-209ENST00000497470 PTPRFP10586 1907 aa23.02■■□□□ 1.28
SCAMP3-209ENST00000497470 TRIM75PA6NK02 468 aa23.02■■□□□ 1.28
SCAMP3-209ENST00000497470 FAM155AB1AL88 458 aaPredicted RBP23.02■■□□□ 1.28
SCAMP3-209ENST00000497470 PARP1P09874 1014 aaKnown RBP23.02■■□□□ 1.28
SCAMP3-209ENST00000497470 SLC1A4P43007 532 aa23.02■■□□□ 1.28
SCAMP3-209ENST00000497470 NOGQ13253 232 aa23.02■■□□□ 1.28
SCAMP3-209ENST00000497470 PABPC4Q13310 644 aaKnown RBP eCLIP23.02■■□□□ 1.28
SCAMP3-209ENST00000497470 FAM160B2Q86V87 743 aa23.02■■□□□ 1.28
SCAMP3-209ENST00000497470 LRRC47Q8N1G4 583 aaKnown RBP23.02■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 61.3 ms