RNA–Protein interactions for RNA: ENST00000495619.1

NCKAP1-208, Transcript of NCK associated protein 1, humanhuman

TSL 3

Gene NCKAP1, Length 665 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKAP1-208ENST00000495619 NME1P15531 152 aaKnown RBP8.66□□□□□ -1.02
NCKAP1-208ENST00000495619 CLEC16AQ2KHT3 1053 aa8.66□□□□□ -1.02
NCKAP1-208ENST00000495619 DTWD2Q8NBA8 298 aa8.66□□□□□ -1.02
NCKAP1-208ENST00000495619 GPR62Q9BZJ7 368 aa8.66□□□□□ -1.02
NCKAP1-208ENST00000495619 INPP5FQ9Y2H2 1132 aa8.66□□□□□ -1.02
NCKAP1-208ENST00000495619 TCF3P15923 654 aa8.65□□□□□ -1.02
NCKAP1-208ENST00000495619 GNL2Q13823 731 aaKnown RBP8.65□□□□□ -1.02
NCKAP1-208ENST00000495619 INTS3Q68E01 1043 aaKnown RBP8.65□□□□□ -1.02
NCKAP1-208ENST00000495619 MCTP1Q6DN14 999 aa8.65□□□□□ -1.02
NCKAP1-208ENST00000495619 VPS37DQ86XT2 251 aa8.65□□□□□ -1.02
NCKAP1-208ENST00000495619 Q96M66 194 aa8.65□□□□□ -1.02
NCKAP1-208ENST00000495619 TM9SF2Q99805 663 aa8.65□□□□□ -1.02
NCKAP1-208ENST00000495619 RC3H2Q9HBD1 1191 aaKnown RBP8.65□□□□□ -1.02
NCKAP1-208ENST00000495619 E9PSI1 815 aa8.64□□□□□ -1.03
NCKAP1-208ENST00000495619 TNFRSF10CO14798 259 aa8.64□□□□□ -1.03
NCKAP1-208ENST00000495619 JUNBP17275 347 aaPredicted RBP8.64□□□□□ -1.03
NCKAP1-208ENST00000495619 TAL1P17542 331 aaPredicted RBP8.64□□□□□ -1.03
NCKAP1-208ENST00000495619 ERCC5P28715 1186 aaPredicted RBP8.64□□□□□ -1.03
NCKAP1-208ENST00000495619 TPP2P29144 1249 aaPredicted RBP8.64□□□□□ -1.03
NCKAP1-208ENST00000495619 RASGRP4Q8TDF6 673 aa8.64□□□□□ -1.03
NCKAP1-208ENST00000495619 CARS2Q9HA77 564 aaKnown RBP8.64□□□□□ -1.03
NCKAP1-208ENST00000495619 EFR3BQ9Y2G0 817 aa8.64□□□□□ -1.03
NCKAP1-208ENST00000495619 PAX4O43316 350 aa8.63□□□□□ -1.03
NCKAP1-208ENST00000495619 UBOX5O94941 541 aa8.63□□□□□ -1.03
NCKAP1-208ENST00000495619 CBLL1Q75N03 491 aa8.63□□□□□ -1.03
NCKAP1-208ENST00000495619 WFDC3Q8IUB2 231 aa8.63□□□□□ -1.03
NCKAP1-208ENST00000495619 CREG2Q8IUH2 290 aa8.63□□□□□ -1.03
NCKAP1-208ENST00000495619 ENOX1Q8TC92 643 aaKnown RBP8.63□□□□□ -1.03
NCKAP1-208ENST00000495619 CPLX3Q8WVH0 158 aa8.63□□□□□ -1.03
NCKAP1-208ENST00000495619 GJA8P48165 433 aa8.62□□□□□ -1.03
NCKAP1-208ENST00000495619 TAB3Q8N5C8 712 aaPredicted RBP8.62□□□□□ -1.03
NCKAP1-208ENST00000495619 RBBP8NLQ8NC74 664 aaPredicted RBP8.62□□□□□ -1.03
NCKAP1-208ENST00000495619 OR6P1Q8NGX9 317 aa8.62□□□□□ -1.03
NCKAP1-208ENST00000495619 SEC16BQ96JE7 1060 aa8.62□□□□□ -1.03
NCKAP1-208ENST00000495619 DUSP15Q9H1R2 295 aaPredicted RBP8.62□□□□□ -1.03
NCKAP1-208ENST00000495619 ANTXR1Q9H6X2 564 aa8.62□□□□□ -1.03
NCKAP1-208ENST00000495619 GINM1Q9NU53 330 aa8.62□□□□□ -1.03
NCKAP1-208ENST00000495619 MBNL3Q9NUK0 354 aaKnown RBP8.62□□□□□ -1.03
NCKAP1-208ENST00000495619 DUSP13Q9UII6 198 aa8.62□□□□□ -1.03
NCKAP1-208ENST00000495619 PPT2Q9UMR5 302 aa8.62□□□□□ -1.03
NCKAP1-208ENST00000495619 LRRN2O75325 713 aa8.61□□□□□ -1.03
NCKAP1-208ENST00000495619 RNASE1P07998 156 aaKnown RBP8.61□□□□□ -1.03
NCKAP1-208ENST00000495619 LTKP29376 864 aa8.61□□□□□ -1.03
NCKAP1-208ENST00000495619 POLR2BP30876 1174 aaKnown RBP8.61□□□□□ -1.03
NCKAP1-208ENST00000495619 SOX9P48436 509 aa8.61□□□□□ -1.03
NCKAP1-208ENST00000495619 EIF6P56537 245 aaKnown RBP8.61□□□□□ -1.03
NCKAP1-208ENST00000495619 NBPF12Q5TAG4 269 aaPredicted RBP8.61□□□□□ -1.03
NCKAP1-208ENST00000495619 ATG4DQ86TL0 474 aaPredicted RBP8.61□□□□□ -1.03
NCKAP1-208ENST00000495619 TSPYL5Q86VY4 417 aaPredicted RBP8.61□□□□□ -1.03
NCKAP1-208ENST00000495619 ASIC4Q96FT7 647 aa8.61□□□□□ -1.03
NCKAP1-208ENST00000495619 MKRN2Q9H000 416 aaKnown RBP8.61□□□□□ -1.03
NCKAP1-208ENST00000495619 SRFP11831 508 aa8.6□□□□□ -1.03
NCKAP1-208ENST00000495619 SLC9A7Q96T83 725 aa8.6□□□□□ -1.03
NCKAP1-208ENST00000495619 SRRTQ9BXP5 876 aaKnown RBP8.6□□□□□ -1.03
NCKAP1-208ENST00000495619 ACBD3Q9H3P7 528 aa8.6□□□□□ -1.03
NCKAP1-208ENST00000495619 CAPN10Q9HC96 672 aa8.6□□□□□ -1.03
NCKAP1-208ENST00000495619 STRIP2Q9ULQ0 834 aa8.6□□□□□ -1.03
NCKAP1-208ENST00000495619 SLC12A7Q9Y666 1083 aa8.6□□□□□ -1.03
NCKAP1-208ENST00000495619 SSU72P8A0A1W2PR75 194 aa8.59□□□□□ -1.03
NCKAP1-208ENST00000495619 GUCY2CP25092 1073 aa8.59□□□□□ -1.03
NCKAP1-208ENST00000495619 NMIQ13287 307 aaPredicted RBP8.59□□□□□ -1.03
NCKAP1-208ENST00000495619 BBS9Q3SYG4 887 aa8.59□□□□□ -1.03
NCKAP1-208ENST00000495619 SMARCC1Q92922 1105 aaPredicted RBP8.59□□□□□ -1.03
NCKAP1-208ENST00000495619 ZNF428Q96B54 188 aa8.59□□□□□ -1.03
NCKAP1-208ENST00000495619 VWCEQ96DN2 955 aa8.59□□□□□ -1.03
NCKAP1-208ENST00000495619 SLC6A18Q96N87 628 aa8.59□□□□□ -1.03
NCKAP1-208ENST00000495619 ALPK1Q96QP1 1244 aa8.59□□□□□ -1.03
NCKAP1-208ENST00000495619 RAC2P15153 192 aa8.58□□□□□ -1.04
NCKAP1-208ENST00000495619 AFMP43652 599 aa8.58□□□□□ -1.04
NCKAP1-208ENST00000495619 NASPP49321 788 aaPredicted RBP8.58□□□□□ -1.04
NCKAP1-208ENST00000495619 NBPF9Q3BBW0 867 aa8.58□□□□□ -1.04
NCKAP1-208ENST00000495619 LRRN4CLQ8ND94 238 aa8.58□□□□□ -1.04
NCKAP1-208ENST00000495619 DHX38Q92620 1227 aaKnown RBP8.58□□□□□ -1.04
NCKAP1-208ENST00000495619 PRDM7Q9NQW5 492 aa8.58□□□□□ -1.04
NCKAP1-208ENST00000495619 SLAMF8Q9P0V8 285 aa8.58□□□□□ -1.04
NCKAP1-208ENST00000495619 SUCOQ9UBS9 1254 aaKnown RBP8.58□□□□□ -1.04
NCKAP1-208ENST00000495619 ADAMTS6Q9UKP5 1117 aa8.58□□□□□ -1.04
NCKAP1-208ENST00000495619 FBXL21Q9UKT6 434 aa8.58□□□□□ -1.04
NCKAP1-208ENST00000495619 EGR3Q06889 387 aa8.57□□□□□ -1.04
NCKAP1-208ENST00000495619 GAB4Q2WGN9 574 aa8.57□□□□□ -1.04
NCKAP1-208ENST00000495619 CCDC81Q6ZN84 652 aa8.57□□□□□ -1.04
NCKAP1-208ENST00000495619 CCDC144CPQ8IYA2 1237 aa8.57□□□□□ -1.04
NCKAP1-208ENST00000495619 SYTL5Q8TDW5 730 aaPredicted RBP8.57□□□□□ -1.04
NCKAP1-208ENST00000495619 PCDHB12Q9Y5F1 795 aa8.57□□□□□ -1.04
NCKAP1-208ENST00000495619 ESR1P03372 595 aa8.56□□□□□ -1.04
NCKAP1-208ENST00000495619 ITGB5P18084 799 aa8.56□□□□□ -1.04
NCKAP1-208ENST00000495619 GDNFP39905 211 aa8.56□□□□□ -1.04
NCKAP1-208ENST00000495619 LSRQ86X29 649 aaPredicted RBP8.56□□□□□ -1.04
NCKAP1-208ENST00000495619 TMEM192Q8IY95 271 aa8.56□□□□□ -1.04
NCKAP1-208ENST00000495619 ZNF655Q8N720 491 aaPredicted RBP8.56□□□□□ -1.04
NCKAP1-208ENST00000495619 DAGLBQ8NCG7 672 aa8.56□□□□□ -1.04
NCKAP1-208ENST00000495619 FLAD1Q8NFF5 587 aa8.56□□□□□ -1.04
NCKAP1-208ENST00000495619 ZNF512BQ96KM6 892 aaPredicted RBP8.56□□□□□ -1.04
NCKAP1-208ENST00000495619 FAM86C2PA6NEL3 165 aa8.55□□□□□ -1.04
NCKAP1-208ENST00000495619 GIPRP48546 466 aa8.55□□□□□ -1.04
NCKAP1-208ENST00000495619 PMS1P54277 932 aaKnown RBP8.55□□□□□ -1.04
NCKAP1-208ENST00000495619 PCBP3P57721 371 aaKnown RBP8.55□□□□□ -1.04
NCKAP1-208ENST00000495619 ENDOUP21128 410 aaKnown RBP8.54□□□□□ -1.04
NCKAP1-208ENST00000495619 AUHQ13825 339 aaKnown RBP8.54□□□□□ -1.04
NCKAP1-208ENST00000495619 UNC5AQ6ZN44 842 aa8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms