RNA–Protein interactions for RNA: ENST00000494973.1

APTX-231, Transcript of aprataxin, humanhuman

TSL 4

Gene APTX, Length 547 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-231ENST00000494973 MICU3Q86XE3 530 aa15.81■□□□□ 0.12
APTX-231ENST00000494973 ZNF280CQ8ND82 737 aa15.81■□□□□ 0.12
APTX-231ENST00000494973 DCAF4Q8WV16 495 aa15.81■□□□□ 0.12
APTX-231ENST00000494973 LPAR1Q92633 364 aa15.81■□□□□ 0.12
APTX-231ENST00000494973 LZTS2Q9BRK4 669 aa15.81■□□□□ 0.12
APTX-231ENST00000494973 KIAA1683Q9H0B3 1180 aa15.81■□□□□ 0.12
APTX-231ENST00000494973 TPCN1Q9ULQ1 816 aa15.81■□□□□ 0.12
APTX-231ENST00000494973 SNCAIPQ9Y6H5 919 aa15.81■□□□□ 0.12
APTX-231ENST00000494973 GOLGA8AA7E2F4 631 aa15.8■□□□□ 0.12
APTX-231ENST00000494973 CPLX1O14810 134 aa15.8■□□□□ 0.12
APTX-231ENST00000494973 SLURP2P0DP57 97 aa15.8■□□□□ 0.12
APTX-231ENST00000494973 PDIA3P30101 505 aaKnown RBP15.8■□□□□ 0.12
APTX-231ENST00000494973 RTN1Q16799 776 aa15.8■□□□□ 0.12
APTX-231ENST00000494973 ASPRV1Q53RT3 343 aa15.8■□□□□ 0.12
APTX-231ENST00000494973 GPATCH4Q5T3I0 446 aaKnown RBP15.8■□□□□ 0.12
APTX-231ENST00000494973 PPP1R3FQ6ZSY5 799 aaPredicted RBP15.8■□□□□ 0.12
APTX-231ENST00000494973 NOL8Q76FK4 1167 aaKnown RBP15.8■□□□□ 0.12
APTX-231ENST00000494973 GTF3C6Q969F1 213 aa15.8■□□□□ 0.12
APTX-231ENST00000494973 ZKSCAN4Q969J2 545 aaPredicted RBP15.8■□□□□ 0.12
APTX-231ENST00000494973 GMCL1Q96IK5 515 aa15.8■□□□□ 0.12
APTX-231ENST00000494973 TMX3Q96JJ7 454 aa15.8■□□□□ 0.12
APTX-231ENST00000494973 ZSCAN21Q9Y5A6 473 aaPredicted RBP15.8■□□□□ 0.12
APTX-231ENST00000494973 USP17L10C9JJH3 530 aa15.79■□□□□ 0.12
APTX-231ENST00000494973 PARP1P09874 1014 aaKnown RBP15.79■□□□□ 0.12
APTX-231ENST00000494973 TROAPQ12815 778 aa15.79■□□□□ 0.12
APTX-231ENST00000494973 PPIL2Q13356 520 aa15.79■□□□□ 0.12
APTX-231ENST00000494973 COL9A3Q14050 684 aaPredicted RBP15.79■□□□□ 0.12
APTX-231ENST00000494973 GRM4Q14833 912 aa15.79■□□□□ 0.12
APTX-231ENST00000494973 LRRC47Q8N1G4 583 aaKnown RBP15.79■□□□□ 0.12
APTX-231ENST00000494973 NKX2-3Q8TAU0 364 aa15.79■□□□□ 0.12
APTX-231ENST00000494973 NUP133Q8WUM0 1156 aa15.79■□□□□ 0.12
APTX-231ENST00000494973 INTS4Q96HW7 963 aaKnown RBP15.79■□□□□ 0.12
APTX-231ENST00000494973 LLPHQ9BRT6 129 aaKnown RBP15.79■□□□□ 0.12
APTX-231ENST00000494973 GPHNQ9NQX3 736 aaPredicted RBP15.79■□□□□ 0.12
APTX-231ENST00000494973 RBM27Q9P2N5 1060 aaKnown RBP15.79■□□□□ 0.12
APTX-231ENST00000494973 BRPF3Q9ULD4 1205 aa15.79■□□□□ 0.12
APTX-231ENST00000494973 KIF3AQ9Y496 699 aa15.79■□□□□ 0.12
APTX-231ENST00000494973 CXCL11O14625 94 aa15.78■□□□□ 0.12
APTX-231ENST00000494973 CD2BP2O95400 341 aaKnown RBP15.78■□□□□ 0.12
APTX-231ENST00000494973 ME3Q16798 604 aa15.78■□□□□ 0.12
APTX-231ENST00000494973 SLFN13Q68D06 897 aa15.78■□□□□ 0.12
APTX-231ENST00000494973 USP17L2Q6R6M4 530 aa15.78■□□□□ 0.12
APTX-231ENST00000494973 FANCBQ8NB91 859 aa15.78■□□□□ 0.12
APTX-231ENST00000494973 SLC10A4Q96EP9 437 aa15.78■□□□□ 0.12
APTX-231ENST00000494973 VCPKMTQ9H867 229 aa15.78■□□□□ 0.12
APTX-231ENST00000494973 TMOD4Q9NZQ9 345 aa15.78■□□□□ 0.12
APTX-231ENST00000494973 ZHX2Q9Y6X8 837 aa15.78■□□□□ 0.12
APTX-231ENST00000494973 F5H6K3 240 aa15.77■□□□□ 0.12
APTX-231ENST00000494973 WDR46O15213 610 aaKnown RBP15.77■□□□□ 0.12
APTX-231ENST00000494973 SNHG28P0DPA3 235 aa15.77■□□□□ 0.12
APTX-231ENST00000494973 PDHBP11177 359 aa15.77■□□□□ 0.12
APTX-231ENST00000494973 SMARCA1P28370 1054 aa15.77■□□□□ 0.12
APTX-231ENST00000494973 SLC1A4P43007 532 aa15.77■□□□□ 0.12
APTX-231ENST00000494973 BACE1P56817 501 aa15.77■□□□□ 0.12
APTX-231ENST00000494973 JAG1P78504 1218 aa15.77■□□□□ 0.12
APTX-231ENST00000494973 HMGN5P82970 282 aaKnown RBP15.77■□□□□ 0.12
APTX-231ENST00000494973 KLRC3Q07444 240 aa15.77■□□□□ 0.12
APTX-231ENST00000494973 CUL4AQ13619 759 aa15.77■□□□□ 0.12
APTX-231ENST00000494973 DLK2Q6UY11 383 aa15.77■□□□□ 0.12
APTX-231ENST00000494973 CLEC10AQ8IUN9 316 aa15.77■□□□□ 0.12
APTX-231ENST00000494973 C12orf42Q96LP6 360 aa15.77■□□□□ 0.12
APTX-231ENST00000494973 ELP3Q9H9T3 547 aa15.77■□□□□ 0.12
APTX-231ENST00000494973 PHIPQ8WWQ0 1821 aa15.76■□□□□ 0.11
APTX-231ENST00000494973 TMEM88BA6NKF7 163 aa15.76■□□□□ 0.11
APTX-231ENST00000494973 UBE2Q2LH0YL09 131 aa15.76■□□□□ 0.11
APTX-231ENST00000494973 NDUFB10O96000 172 aa15.76■□□□□ 0.11
APTX-231ENST00000494973 ZBTB48P10074 688 aaPredicted RBP15.76■□□□□ 0.11
APTX-231ENST00000494973 PDIA4P13667 645 aaKnown RBP15.76■□□□□ 0.11
APTX-231ENST00000494973 HUNKP57058 714 aa15.76■□□□□ 0.11
APTX-231ENST00000494973 SPP2Q13103 211 aa15.76■□□□□ 0.11
APTX-231ENST00000494973 CCDC96Q2M329 555 aa15.76■□□□□ 0.11
APTX-231ENST00000494973 SHROOM1Q2M3G4 852 aaPredicted RBP15.76■□□□□ 0.11
APTX-231ENST00000494973 SIAH1Q8IUQ4 282 aa15.76■□□□□ 0.11
APTX-231ENST00000494973 TRIM22Q8IYM9 498 aa15.76■□□□□ 0.11
APTX-231ENST00000494973 HHIPL1Q96JK4 782 aa15.76■□□□□ 0.11
APTX-231ENST00000494973 SENP2Q9HC62 589 aa15.76■□□□□ 0.11
APTX-231ENST00000494973 HPS5Q9UPZ3 1129 aa15.76■□□□□ 0.11
APTX-231ENST00000494973 AFG3L2Q9Y4W6 797 aa15.76■□□□□ 0.11
APTX-231ENST00000494973 A0A1W2PRG0 241 aa15.75■□□□□ 0.11
APTX-231ENST00000494973 RAD21O60216 631 aa15.75■□□□□ 0.11
APTX-231ENST00000494973 ECE1P42892 770 aa15.75■□□□□ 0.11
APTX-231ENST00000494973 AKAP17AQ02040 695 aaKnown RBP15.75■□□□□ 0.11
APTX-231ENST00000494973 ZNF543Q08ER8 600 aa15.75■□□□□ 0.11
APTX-231ENST00000494973 SCRN1Q12765 414 aa15.75■□□□□ 0.11
APTX-231ENST00000494973 STK3Q13188 491 aa15.75■□□□□ 0.11
APTX-231ENST00000494973 MTMR2Q13614 643 aa15.75■□□□□ 0.11
APTX-231ENST00000494973 SH3D19Q5HYK7 790 aa15.75■□□□□ 0.11
APTX-231ENST00000494973 CST9Q5W186 159 aa15.75■□□□□ 0.11
APTX-231ENST00000494973 FAM160B2Q86V87 743 aa15.75■□□□□ 0.11
APTX-231ENST00000494973 CCDC83Q8IWF9 413 aa15.75■□□□□ 0.11
APTX-231ENST00000494973 ACER1Q8TDN7 264 aa15.75■□□□□ 0.11
APTX-231ENST00000494973 WASF1Q92558 559 aa15.75■□□□□ 0.11
APTX-231ENST00000494973 OPTNQ96CV9 577 aa15.75■□□□□ 0.11
APTX-231ENST00000494973 OTUD5Q96G74 571 aa15.75■□□□□ 0.11
APTX-231ENST00000494973 IPO9Q96P70 1041 aaKnown RBP15.75■□□□□ 0.11
APTX-231ENST00000494973 FZD1Q9UP38 647 aa15.75■□□□□ 0.11
APTX-231ENST00000494973 KCNH4Q9UQ05 1017 aa15.75■□□□□ 0.11
APTX-231ENST00000494973 STK36Q9NRP7 1315 aa15.74■□□□□ 0.11
APTX-231ENST00000494973 PALM3A6NDB9 673 aaPredicted RBP15.74■□□□□ 0.11
APTX-231ENST00000494973 TRIM75PA6NK02 468 aa15.74■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms