RNA–Protein interactions for RNA: ENST00000493945.5

ACTB-213, Transcript of actin beta, humanhuman

TSL 5

Gene ACTB, Length 1,236 nt, Biotype retained intron, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-213ENST00000493945 ANTXR2P58335 489 aa17.44■□□□□ 0.38
ACTB-213ENST00000493945 SREBF2Q12772 1141 aa17.44■□□□□ 0.38
ACTB-213ENST00000493945 SPP2Q13103 211 aa17.44■□□□□ 0.38
ACTB-213ENST00000493945 MTMR2Q13614 643 aa17.44■□□□□ 0.38
ACTB-213ENST00000493945 RRP1BQ14684 758 aaKnown RBP17.44■□□□□ 0.38
ACTB-213ENST00000493945 SEC23AQ15436 765 aa17.44■□□□□ 0.38
ACTB-213ENST00000493945 CTCFLQ8NI51 663 aaPredicted RBP17.44■□□□□ 0.38
ACTB-213ENST00000493945 BRF1Q92994 677 aa17.44■□□□□ 0.38
ACTB-213ENST00000493945 CLMNQ96JQ2 1002 aa17.44■□□□□ 0.38
ACTB-213ENST00000493945 VCPKMTQ9H867 229 aa17.44■□□□□ 0.38
ACTB-213ENST00000493945 LY9Q9HBG7 655 aa17.44■□□□□ 0.38
ACTB-213ENST00000493945 IL17RBQ9NRM6 502 aa17.44■□□□□ 0.38
ACTB-213ENST00000493945 ISY1Q9ULR0 285 aaKnown RBP17.44■□□□□ 0.38
ACTB-213ENST00000493945 PTPRFP10586 1907 aa17.43■□□□□ 0.38
ACTB-213ENST00000493945 MANSC4A6NHS7 340 aaPredicted RBP17.43■□□□□ 0.38
ACTB-213ENST00000493945 NMT2O60551 498 aa17.43■□□□□ 0.38
ACTB-213ENST00000493945 GNAQP50148 359 aa17.43■□□□□ 0.38
ACTB-213ENST00000493945 DEFB115Q30KQ5 88 aa17.43■□□□□ 0.38
ACTB-213ENST00000493945 GPATCH4Q5T3I0 446 aaKnown RBP17.43■□□□□ 0.38
ACTB-213ENST00000493945 OTUD7BQ6GQQ9 843 aa17.43■□□□□ 0.38
ACTB-213ENST00000493945 RCSD1Q6JBY9 416 aa17.43■□□□□ 0.38
ACTB-213ENST00000493945 CPLX2Q6PUV4 134 aaKnown RBP17.43■□□□□ 0.38
ACTB-213ENST00000493945 LRRC47Q8N1G4 583 aaKnown RBP17.43■□□□□ 0.38
ACTB-213ENST00000493945 PROCA1Q8NCQ7 364 aaPredicted RBP17.43■□□□□ 0.38
ACTB-213ENST00000493945 IGDCC4Q8TDY8 1250 aa17.43■□□□□ 0.38
ACTB-213ENST00000493945 DCAF4Q8WV16 495 aa17.43■□□□□ 0.38
ACTB-213ENST00000493945 TMEM47Q9BQJ4 181 aa17.43■□□□□ 0.38
ACTB-213ENST00000493945 GNL3Q9BVP2 549 aaKnown RBP eCLIP17.43■□□□□ 0.38
ACTB-213ENST00000493945 KCNH4Q9UQ05 1017 aa17.43■□□□□ 0.38
ACTB-213ENST00000493945 AFG3L2Q9Y4W6 797 aa17.43■□□□□ 0.38
ACTB-213ENST00000493945 RASSF10A6NK89 507 aa17.42■□□□□ 0.38
ACTB-213ENST00000493945 WDR46O15213 610 aaKnown RBP17.42■□□□□ 0.38
ACTB-213ENST00000493945 ZBTB43O43298 467 aa17.42■□□□□ 0.38
ACTB-213ENST00000493945 DHX16O60231 1041 aaKnown RBP17.42■□□□□ 0.38
ACTB-213ENST00000493945 SLC10A3P09131 477 aa17.42■□□□□ 0.38
ACTB-213ENST00000493945 SLC1A4P43007 532 aa17.42■□□□□ 0.38
ACTB-213ENST00000493945 INHBEP58166 350 aa17.42■□□□□ 0.38
ACTB-213ENST00000493945 NOGQ13253 232 aa17.42■□□□□ 0.38
ACTB-213ENST00000493945 ASPRV1Q53RT3 343 aa17.42■□□□□ 0.38
ACTB-213ENST00000493945 SPRYD7Q5W111 196 aa17.42■□□□□ 0.38
ACTB-213ENST00000493945 RASAL3Q86YV0 1011 aa17.42■□□□□ 0.38
ACTB-213ENST00000493945 ZNF654Q8IZM8 581 aa17.42■□□□□ 0.38
ACTB-213ENST00000493945 C12orf42Q96LP6 360 aa17.42■□□□□ 0.38
ACTB-213ENST00000493945 ZSCAN31Q96LW9 406 aaPredicted RBP17.42■□□□□ 0.38
ACTB-213ENST00000493945 TCEANC2Q96MN5 208 aa17.42■□□□□ 0.38
ACTB-213ENST00000493945 MAP3K14Q99558 947 aa17.42■□□□□ 0.38
ACTB-213ENST00000493945 LRRC2Q9BYS8 371 aa17.42■□□□□ 0.38
ACTB-213ENST00000493945 AGXT2Q9BYV1 514 aa17.42■□□□□ 0.38
ACTB-213ENST00000493945 RBM28Q9NW13 759 aaKnown RBP17.42■□□□□ 0.38
ACTB-213ENST00000493945 PNMA3Q9UL41 463 aa17.42■□□□□ 0.38
ACTB-213ENST00000493945 LOC285556D6RIA3 1793 aa17.42■□□□□ 0.38
ACTB-213ENST00000493945 KLF18A0A0U1RQI7 1052 aa17.41■□□□□ 0.38
ACTB-213ENST00000493945 GOLGA8BA8MQT2 603 aa17.41■□□□□ 0.38
ACTB-213ENST00000493945 IRF6O14896 467 aa17.41■□□□□ 0.38
ACTB-213ENST00000493945 PARP1P09874 1014 aaKnown RBP17.41■□□□□ 0.38
ACTB-213ENST00000493945 CCDC96Q2M329 555 aa17.41■□□□□ 0.38
ACTB-213ENST00000493945 SH3D19Q5HYK7 790 aa17.41■□□□□ 0.38
ACTB-213ENST00000493945 SLFN13Q68D06 897 aa17.41■□□□□ 0.38
ACTB-213ENST00000493945 HSCBQ8IWL3 235 aa17.41■□□□□ 0.38
ACTB-213ENST00000493945 NUP133Q8WUM0 1156 aa17.41■□□□□ 0.38
ACTB-213ENST00000493945 GMCL1Q96IK5 515 aa17.41■□□□□ 0.38
ACTB-213ENST00000493945 SH2B1Q9NRF2 756 aaPredicted RBP17.41■□□□□ 0.38
ACTB-213ENST00000493945 A0A0G2JLL6 359 aaPredicted RBP17.4■□□□□ 0.38
ACTB-213ENST00000493945 F5H6K3 240 aa17.4■□□□□ 0.38
ACTB-213ENST00000493945 CPA1P15085 419 aa17.4■□□□□ 0.38
ACTB-213ENST00000493945 ANP32AP39687 249 aaKnown RBP17.4■□□□□ 0.38
ACTB-213ENST00000493945 METAP2P50579 478 aaKnown RBP eCLIP17.4■□□□□ 0.382e-17■□□□□ 9.2
ACTB-213ENST00000493945 AK2P54819 239 aa17.4■□□□□ 0.38
ACTB-213ENST00000493945 HMGCS2P54868 508 aa17.4■□□□□ 0.38
ACTB-213ENST00000493945 C1QTNF8P60827 252 aa17.4■□□□□ 0.38
ACTB-213ENST00000493945 KLRC3Q07444 240 aa17.4■□□□□ 0.38
ACTB-213ENST00000493945 IKQ13123 557 aaPredicted RBP17.4■□□□□ 0.38
ACTB-213ENST00000493945 BECN1Q14457 450 aa17.4■□□□□ 0.38
ACTB-213ENST00000493945 ZYXQ15942 572 aaKnown RBP17.4■□□□□ 0.38
ACTB-213ENST00000493945 APOA5Q6Q788 366 aa17.4■□□□□ 0.38
ACTB-213ENST00000493945 GADL1Q6ZQY3 521 aa17.4■□□□□ 0.38
ACTB-213ENST00000493945 PRRT2Q7Z6L0 340 aaPredicted RBP17.4■□□□□ 0.38
ACTB-213ENST00000493945 MICU3Q86XE3 530 aa17.4■□□□□ 0.38
ACTB-213ENST00000493945 CLEC10AQ8IUN9 316 aa17.4■□□□□ 0.38
ACTB-213ENST00000493945 ZNF274Q96GC6 653 aaPredicted RBP17.4■□□□□ 0.38
ACTB-213ENST00000493945 KIF2CQ99661 725 aa17.4■□□□□ 0.38
ACTB-213ENST00000493945 LZTS2Q9BRK4 669 aa17.4■□□□□ 0.38
ACTB-213ENST00000493945 LIMCH1Q9UPQ0 1083 aa17.4■□□□□ 0.38
ACTB-213ENST00000493945 GOLGA8AA7E2F4 631 aa17.39■□□□□ 0.37
ACTB-213ENST00000493945 CPLX1O14810 134 aa17.39■□□□□ 0.37
ACTB-213ENST00000493945 CDKL5O76039 1030 aa17.39■□□□□ 0.37
ACTB-213ENST00000493945 BMP3P12645 472 aa17.39■□□□□ 0.37
ACTB-213ENST00000493945 HSPA6P17066 643 aa17.39■□□□□ 0.37
ACTB-213ENST00000493945 JAG1P78504 1218 aa17.39■□□□□ 0.37
ACTB-213ENST00000493945 SHROOM1Q2M3G4 852 aaPredicted RBP17.39■□□□□ 0.37
ACTB-213ENST00000493945 FAM160B2Q86V87 743 aa17.39■□□□□ 0.37
ACTB-213ENST00000493945 ACER1Q8TDN7 264 aa17.39■□□□□ 0.37
ACTB-213ENST00000493945 GTF3C2Q8WUA4 911 aaPredicted RBP17.39■□□□□ 0.37
ACTB-213ENST00000493945 SLKQ9H2G2 1235 aaPredicted RBP17.39■□□□□ 0.37
ACTB-213ENST00000493945 FRMD4AQ9P2Q2 1039 aaPredicted RBP17.39■□□□□ 0.37
ACTB-213ENST00000493945 MTMR7Q9Y216 660 aa17.39■□□□□ 0.37
ACTB-213ENST00000493945 CCL15-CCL14A0A0B4J2E2 113 aa17.38■□□□□ 0.37
ACTB-213ENST00000493945 NDUFB10O96000 172 aa17.38■□□□□ 0.37
ACTB-213ENST00000493945 OSBPP22059 807 aa17.38■□□□□ 0.37
ACTB-213ENST00000493945 EVCP57679 992 aa17.38■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms