RNA–Protein interactions for RNA: ENST00000493727.5

UPF3A-210, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 5

Gene UPF3A, Length 937 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-210ENST00000493727 GGCXP38435 758 aa14.69□□□□□ -0.06
UPF3A-210ENST00000493727 PPIL2Q13356 520 aa14.69□□□□□ -0.06
UPF3A-210ENST00000493727 SNAPC2Q13487 334 aa14.69□□□□□ -0.06
UPF3A-210ENST00000493727 PRR7Q8TB68 274 aa14.69□□□□□ -0.06
UPF3A-210ENST00000493727 DBNLQ9UJU6 430 aaKnown RBP14.69□□□□□ -0.06
UPF3A-210ENST00000493727 DAGLAQ9Y4D2 1042 aa14.69□□□□□ -0.06
UPF3A-210ENST00000493727 MGAMO43451 1857 aa14.69□□□□□ -0.06
UPF3A-210ENST00000493727 DOCK2Q92608 1830 aa14.69□□□□□ -0.06
UPF3A-210ENST00000493727 PDS5AQ29RF7 1337 aaKnown RBP14.68□□□□□ -0.06
UPF3A-210ENST00000493727 ADGRA2Q96PE1 1338 aa14.68□□□□□ -0.06
UPF3A-210ENST00000493727 ERC2O15083 957 aa14.68□□□□□ -0.06
UPF3A-210ENST00000493727 DXOO77932 396 aaKnown RBP14.68□□□□□ -0.06
UPF3A-210ENST00000493727 GNRH1P01148 92 aa14.68□□□□□ -0.06
UPF3A-210ENST00000493727 CTGFP29279 349 aa14.68□□□□□ -0.06
UPF3A-210ENST00000493727 PRDX5P30044 214 aa14.68□□□□□ -0.06
UPF3A-210ENST00000493727 ADORA1P30542 326 aa14.68□□□□□ -0.06
UPF3A-210ENST00000493727 CCDC158Q5M9N0 1113 aa14.68□□□□□ -0.06
UPF3A-210ENST00000493727 TTC39AQ5SRH9 613 aa14.68□□□□□ -0.06
UPF3A-210ENST00000493727 TSHZ3Q63HK5 1081 aa14.68□□□□□ -0.06
UPF3A-210ENST00000493727 PLEKHM2Q8IWE5 1019 aa14.68□□□□□ -0.06
UPF3A-210ENST00000493727 PCMTD1Q96MG8 357 aaPredicted RBP14.68□□□□□ -0.06
UPF3A-210ENST00000493727 ECHDC1Q9NTX5 307 aa14.68□□□□□ -0.06
UPF3A-210ENST00000493727 TTC41PQ6P2S7 1318 aa14.67□□□□□ -0.06
UPF3A-210ENST00000493727 CFAP99D6REC4 459 aa14.67□□□□□ -0.06
UPF3A-210ENST00000493727 MYCP01106 439 aaPredicted RBP14.67□□□□□ -0.06
UPF3A-210ENST00000493727 PHKA1P46020 1223 aa14.67□□□□□ -0.06
UPF3A-210ENST00000493727 PDE1AP54750 535 aa14.67□□□□□ -0.06
UPF3A-210ENST00000493727 PRMT2P55345 433 aa14.67□□□□□ -0.06
UPF3A-210ENST00000493727 PPATQ06203 517 aa14.67□□□□□ -0.06
UPF3A-210ENST00000493727 SPTY2D1Q68D10 685 aaPredicted RBP14.67□□□□□ -0.06
UPF3A-210ENST00000493727 CDC42EP5Q6NZY7 148 aa14.67□□□□□ -0.06
UPF3A-210ENST00000493727 C17orf99Q6UX52 265 aa14.67□□□□□ -0.06
UPF3A-210ENST00000493727 ZKSCAN4Q969J2 545 aaPredicted RBP14.67□□□□□ -0.06
UPF3A-210ENST00000493727 A0A0C4DFX4 3053 aa14.67□□□□□ -0.06
UPF3A-210ENST00000493727 TCP10Q12799 353 aa14.66□□□□□ -0.06
UPF3A-210ENST00000493727 KIF22Q14807 665 aa14.66□□□□□ -0.06
UPF3A-210ENST00000493727 MTFR1Q15390 333 aa14.66□□□□□ -0.06
UPF3A-210ENST00000493727 PPP2R2DQ66LE6 453 aa14.66□□□□□ -0.06
UPF3A-210ENST00000493727 CCDC102BQ68D86 513 aa14.66□□□□□ -0.06
UPF3A-210ENST00000493727 UBE2Q1Q7Z7E8 422 aa14.66□□□□□ -0.06
UPF3A-210ENST00000493727 USP40Q9NVE5 1235 aa14.66□□□□□ -0.06
UPF3A-210ENST00000493727 PTPRFP10586 1907 aa14.66□□□□□ -0.06
UPF3A-210ENST00000493727 SALL3Q9BXA9 1300 aa14.66□□□□□ -0.06
UPF3A-210ENST00000493727 GLRX3O76003 335 aaKnown RBP14.65□□□□□ -0.06
UPF3A-210ENST00000493727 JUNDP17535 347 aa14.65□□□□□ -0.06
UPF3A-210ENST00000493727 NOL9Q5SY16 702 aaKnown RBP14.65□□□□□ -0.06
UPF3A-210ENST00000493727 MIGA2Q7L4E1 593 aa14.65□□□□□ -0.06
UPF3A-210ENST00000493727 DZIP1Q86YF9 867 aaKnown RBP14.65□□□□□ -0.06
UPF3A-210ENST00000493727 ANKLE1Q8NAG6 615 aa14.65□□□□□ -0.06
UPF3A-210ENST00000493727 STAP2Q9UGK3 403 aa14.65□□□□□ -0.06
UPF3A-210ENST00000493727 SRRDQ9UH36 339 aa14.65□□□□□ -0.06
UPF3A-210ENST00000493727 ZNF112Q9UJU3 913 aa14.65□□□□□ -0.06
UPF3A-210ENST00000493727 GAKO14976 1311 aa14.65□□□□□ -0.06
UPF3A-210ENST00000493727 ENTPD3O75355 529 aa14.64□□□□□ -0.07
UPF3A-210ENST00000493727 UQCRFS1P1P0C7P4 283 aa14.64□□□□□ -0.07
UPF3A-210ENST00000493727 INPP5BP32019 993 aa14.64□□□□□ -0.07
UPF3A-210ENST00000493727 MOGSQ13724 837 aa14.64□□□□□ -0.07
UPF3A-210ENST00000493727 DESI1Q6ICB0 168 aa14.64□□□□□ -0.07
UPF3A-210ENST00000493727 TRIM47Q96LD4 638 aa14.64□□□□□ -0.07
UPF3A-210ENST00000493727 IDI2Q9BXS1 227 aa14.64□□□□□ -0.07
UPF3A-210ENST00000493727 PRO3102Q9H379 93 aa14.64□□□□□ -0.07
UPF3A-210ENST00000493727 BOLA2Q9H3K6 86 aa14.64□□□□□ -0.07
UPF3A-210ENST00000493727 KCNH4Q9UQ05 1017 aa14.64□□□□□ -0.07
UPF3A-210ENST00000493727 DOCK3Q8IZD9 2030 aa14.64□□□□□ -0.07
UPF3A-210ENST00000493727 CUL9Q8IWT3 2517 aa14.63□□□□□ -0.07
UPF3A-210ENST00000493727 ATP5JP18859 108 aa14.63□□□□□ -0.07
UPF3A-210ENST00000493727 NFIAQ12857 509 aa14.63□□□□□ -0.07
UPF3A-210ENST00000493727 RASGRF1Q13972 1273 aa14.63□□□□□ -0.07
UPF3A-210ENST00000493727 TTC22Q5TAA0 569 aa14.63□□□□□ -0.07
UPF3A-210ENST00000493727 ANKRD23Q86SG2 305 aa14.63□□□□□ -0.07
UPF3A-210ENST00000493727 DNAJC2Q99543 621 aaKnown RBP14.63□□□□□ -0.07
UPF3A-210ENST00000493727 OSBPL3Q9H4L5 887 aa14.63□□□□□ -0.07
UPF3A-210ENST00000493727 ABCF2Q9UG63 623 aa14.63□□□□□ -0.07
UPF3A-210ENST00000493727 CPA4Q9UI42 421 aa14.63□□□□□ -0.07
UPF3A-210ENST00000493727 MAP4K4O95819 1239 aaPredicted RBP14.62□□□□□ -0.07
UPF3A-210ENST00000493727 PSMC4P43686 418 aa14.62□□□□□ -0.07
UPF3A-210ENST00000493727 GJA8P48165 433 aa14.62□□□□□ -0.07
UPF3A-210ENST00000493727 DOCK1Q14185 1865 aa14.62□□□□□ -0.07
UPF3A-210ENST00000493727 ERICH6Q7L0X2 663 aa14.62□□□□□ -0.07
UPF3A-210ENST00000493727 PI4K2BQ8TCG2 481 aa14.62□□□□□ -0.07
UPF3A-210ENST00000493727 ALPK3Q96L96 1907 aa14.62□□□□□ -0.07
UPF3A-210ENST00000493727 PDHXO00330 501 aa14.61□□□□□ -0.07
UPF3A-210ENST00000493727 CXCL11O14625 94 aa14.61□□□□□ -0.07
UPF3A-210ENST00000493727 LDHCP07864 332 aa14.61□□□□□ -0.07
UPF3A-210ENST00000493727 GJB1P08034 283 aa14.61□□□□□ -0.07
UPF3A-210ENST00000493727 GRK4P32298 578 aa14.61□□□□□ -0.07
UPF3A-210ENST00000493727 GSTO1P78417 241 aa14.61□□□□□ -0.07
UPF3A-210ENST00000493727 ZSCAN29Q8IWY8 852 aaPredicted RBP14.61□□□□□ -0.07
UPF3A-210ENST00000493727 PPIL4Q8WUA2 492 aaKnown RBP eCLIP14.61□□□□□ -0.07
UPF3A-210ENST00000493727 PICK1Q9NRD5 415 aa14.61□□□□□ -0.07
UPF3A-210ENST00000493727 PHIPQ8WWQ0 1821 aa14.61□□□□□ -0.07
UPF3A-210ENST00000493727 MROH7-TTC4A0A0A0MT08 1334 aa14.61□□□□□ -0.07
UPF3A-210ENST00000493727 MYPNQ86TC9 1320 aa14.61□□□□□ -0.07
UPF3A-210ENST00000493727 ATRNL1Q5VV63 1379 aa14.6□□□□□ -0.07
UPF3A-210ENST00000493727 BCRP11274 1271 aa14.6□□□□□ -0.07
UPF3A-210ENST00000493727 HOXD10P28358 340 aa14.6□□□□□ -0.07
UPF3A-210ENST00000493727 ARID4AP29374 1257 aaPredicted RBP14.6□□□□□ -0.07
UPF3A-210ENST00000493727 RILPL2Q969X0 211 aa14.6□□□□□ -0.07
UPF3A-210ENST00000493727 ZNF512BQ96KM6 892 aaPredicted RBP14.6□□□□□ -0.07
UPF3A-210ENST00000493727 FCF1Q9Y324 198 aaKnown RBP14.6□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms