RNA–Protein interactions for RNA: ENST00000491421.5

LSM2-213, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3

Gene LSM2, Length 820 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2-213ENST00000491421 TRMT44Q8IYL2 757 aaKnown RBP9.91□□□□□ -0.82
LSM2-213ENST00000491421 OTUD7AQ8TE49 926 aaPredicted RBP9.91□□□□□ -0.82
LSM2-213ENST00000491421 DPF3Q92784 378 aa9.91□□□□□ -0.82
LSM2-213ENST00000491421 OSBP2Q969R2 916 aa9.91□□□□□ -0.82
LSM2-213ENST00000491421 CRBNQ96SW2 442 aa9.91□□□□□ -0.82
LSM2-213ENST00000491421 HTATIP2Q9BUP3 242 aa9.91□□□□□ -0.82
LSM2-213ENST00000491421 ZBTB47Q9UFB7 747 aaPredicted RBP9.91□□□□□ -0.82
LSM2-213ENST00000491421 MGAMO43451 1857 aa9.91□□□□□ -0.82
LSM2-213ENST00000491421 RPTORQ8N122 1335 aa9.9□□□□□ -0.82
LSM2-213ENST00000491421 GSG1L2A8MUP6 293 aa9.9□□□□□ -0.82
LSM2-213ENST00000491421 GPAA1O43292 621 aa9.9□□□□□ -0.82
LSM2-213ENST00000491421 PRKAR2AP13861 404 aaKnown RBP9.9□□□□□ -0.82
LSM2-213ENST00000491421 GNAT2P19087 354 aa9.9□□□□□ -0.82
LSM2-213ENST00000491421 MX1P20591 662 aa9.9□□□□□ -0.82
LSM2-213ENST00000491421 ATP2B2Q01814 1243 aa9.9□□□□□ -0.82
LSM2-213ENST00000491421 COG2Q14746 738 aa9.9□□□□□ -0.82
LSM2-213ENST00000491421 MORN1Q5T089 497 aa9.9□□□□□ -0.82
LSM2-213ENST00000491421 GIMAP6Q6P9H5 292 aa9.9□□□□□ -0.82
LSM2-213ENST00000491421 PPP4R3CPQ6ZMV5 832 aa9.9□□□□□ -0.82
LSM2-213ENST00000491421 SIAH1Q8IUQ4 282 aa9.9□□□□□ -0.82
LSM2-213ENST00000491421 SPICE1Q8N0Z3 855 aa9.9□□□□□ -0.82
LSM2-213ENST00000491421 PI4K2BQ8TCG2 481 aa9.9□□□□□ -0.82
LSM2-213ENST00000491421 LPAR1Q92633 364 aa9.9□□□□□ -0.82
LSM2-213ENST00000491421 USP6NLQ92738 828 aa9.9□□□□□ -0.82
LSM2-213ENST00000491421 APBA2Q99767 749 aa9.9□□□□□ -0.82
LSM2-213ENST00000491421 CRISPLD2Q9H0B8 497 aa9.9□□□□□ -0.82
LSM2-213ENST00000491421 HMX1Q9NP08 348 aaPredicted RBP9.9□□□□□ -0.82
LSM2-213ENST00000491421 HOXC10Q9NYD6 342 aa9.9□□□□□ -0.82
LSM2-213ENST00000491421 BTBD7Q9P203 1132 aa9.9□□□□□ -0.82
LSM2-213ENST00000491421 TMX2Q9Y320 296 aa9.9□□□□□ -0.82
LSM2-213ENST00000491421 IVNS1ABPQ9Y6Y0 642 aa9.9□□□□□ -0.82
LSM2-213ENST00000491421 SLC15A5A6NIM6 579 aa9.89□□□□□ -0.83
LSM2-213ENST00000491421 H0YGN5 161 aa9.89□□□□□ -0.83
LSM2-213ENST00000491421 M0R2C6 588 aa9.89□□□□□ -0.83
LSM2-213ENST00000491421 APPP05067 770 aa9.89□□□□□ -0.83
LSM2-213ENST00000491421 EEF2P13639 858 aaKnown RBP9.89□□□□□ -0.83
LSM2-213ENST00000491421 TDO2P48775 406 aa9.89□□□□□ -0.83
LSM2-213ENST00000491421 MAP2K5Q13163 448 aa9.89□□□□□ -0.83
LSM2-213ENST00000491421 SBK1Q52WX2 424 aa9.89□□□□□ -0.83
LSM2-213ENST00000491421 KIAA1755Q5JYT7 1200 aa9.89□□□□□ -0.83
LSM2-213ENST00000491421 MAP3K21Q5TCX8 1036 aa9.89□□□□□ -0.83
LSM2-213ENST00000491421 FSD1Q9BTV5 496 aa9.89□□□□□ -0.83
LSM2-213ENST00000491421 VCPKMTQ9H867 229 aa9.89□□□□□ -0.83
LSM2-213ENST00000491421 KANSL2Q9H9L4 492 aa9.89□□□□□ -0.83
LSM2-213ENST00000491421 ROBO3Q96MS0 1386 aa9.88□□□□□ -0.83
LSM2-213ENST00000491421 MINDY4BA8MYZ0 360 aa9.88□□□□□ -0.83
LSM2-213ENST00000491421 WDR46O15213 610 aaKnown RBP9.88□□□□□ -0.83
LSM2-213ENST00000491421 RAD21O60216 631 aa9.88□□□□□ -0.83
LSM2-213ENST00000491421 FLOT1O75955 427 aa9.88□□□□□ -0.83
LSM2-213ENST00000491421 RASA1P20936 1047 aa9.88□□□□□ -0.83
LSM2-213ENST00000491421 PTPREP23469 700 aa9.88□□□□□ -0.83
LSM2-213ENST00000491421 DSG3P32926 999 aa9.88□□□□□ -0.83
LSM2-213ENST00000491421 CACNB2Q08289 660 aaPredicted RBP9.88□□□□□ -0.83
LSM2-213ENST00000491421 HDAC1Q13547 482 aaPredicted RBP9.88□□□□□ -0.83
LSM2-213ENST00000491421 CCL14Q16627 93 aa9.88□□□□□ -0.83
LSM2-213ENST00000491421 HABP4Q5JVS0 413 aaKnown RBP9.88□□□□□ -0.83
LSM2-213ENST00000491421 ANKRD45Q5TZF3 282 aa9.88□□□□□ -0.83
LSM2-213ENST00000491421 SAMD1Q6SPF0 538 aaPredicted RBP9.88□□□□□ -0.83
LSM2-213ENST00000491421 STK11IPQ8N1F8 1099 aa9.88□□□□□ -0.83
LSM2-213ENST00000491421 MB21D1Q8N884 522 aa9.88□□□□□ -0.83
LSM2-213ENST00000491421 MOV10L1Q9BXT6 1211 aaKnown RBP9.88□□□□□ -0.83
LSM2-213ENST00000491421 NACAP1Q9BZK3 213 aa9.88□□□□□ -0.83
LSM2-213ENST00000491421 MKNK2Q9HBH9 465 aa9.88□□□□□ -0.83
LSM2-213ENST00000491421 EPB41L4AQ9HCS5 686 aaPredicted RBP9.88□□□□□ -0.83
LSM2-213ENST00000491421 GOPCQ9HD26 462 aa9.88□□□□□ -0.83
LSM2-213ENST00000491421 PATL2C9JE40 543 aaKnown RBP9.87□□□□□ -0.83
LSM2-213ENST00000491421 GRB14Q14449 540 aa9.87□□□□□ -0.83
LSM2-213ENST00000491421 PLS1Q14651 629 aa9.87□□□□□ -0.83
LSM2-213ENST00000491421 MFSD14CQ5VZR4 134 aa9.87□□□□□ -0.83
LSM2-213ENST00000491421 NECAB2Q7Z6G3 386 aa9.87□□□□□ -0.83
LSM2-213ENST00000491421 ANKLE1Q8NAG6 615 aa9.87□□□□□ -0.83
LSM2-213ENST00000491421 DIS3LQ8TF46 1054 aaKnown RBP9.87□□□□□ -0.83
LSM2-213ENST00000491421 ATG4CQ96DT6 458 aa9.87□□□□□ -0.83
LSM2-213ENST00000491421 PAWRQ96IZ0 340 aaKnown RBP9.87□□□□□ -0.83
LSM2-213ENST00000491421 SEC62Q99442 399 aaKnown RBP9.87□□□□□ -0.83
LSM2-213ENST00000491421 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.87□□□□□ -0.83
LSM2-213ENST00000491421 SPATC1LQ9H0A9 340 aa9.87□□□□□ -0.83
LSM2-213ENST00000491421 ZNF287Q9HBT7 754 aa9.87□□□□□ -0.83
LSM2-213ENST00000491421 NR2E3Q9Y5X4 410 aa9.87□□□□□ -0.83
LSM2-213ENST00000491421 SALL3Q9BXA9 1300 aa9.86□□□□□ -0.83
LSM2-213ENST00000491421 STRNO43815 780 aa9.86□□□□□ -0.83
LSM2-213ENST00000491421 EVI5O60447 810 aa9.86□□□□□ -0.83
LSM2-213ENST00000491421 PRDM1O75626 825 aa9.86□□□□□ -0.83
LSM2-213ENST00000491421 HOXC6P09630 235 aa9.86□□□□□ -0.83
LSM2-213ENST00000491421 ERCC3P19447 782 aa9.86□□□□□ -0.83
LSM2-213ENST00000491421 CCND3P30281 292 aaPredicted RBP9.86□□□□□ -0.83
LSM2-213ENST00000491421 AAMPQ13685 434 aa9.86□□□□□ -0.83
LSM2-213ENST00000491421 ZMYM1Q5SVZ6 1142 aa9.86□□□□□ -0.83
LSM2-213ENST00000491421 IFNL3Q8IZI9 196 aa9.86□□□□□ -0.83
LSM2-213ENST00000491421 SHCBP1Q8NEM2 672 aa9.86□□□□□ -0.83
LSM2-213ENST00000491421 FLRT1Q9NZU1 646 aa9.86□□□□□ -0.83
LSM2-213ENST00000491421 OGDHLQ9ULD0 1010 aa9.86□□□□□ -0.83
LSM2-213ENST00000491421 COLQQ9Y215 455 aaPredicted RBP9.86□□□□□ -0.83
LSM2-213ENST00000491421 PLXNB2O15031 1838 aa9.85□□□□□ -0.83
LSM2-213ENST00000491421 SLC3A2P08195 630 aaKnown RBP9.85□□□□□ -0.83
LSM2-213ENST00000491421 ADORA2AP29274 412 aa9.85□□□□□ -0.83
LSM2-213ENST00000491421 FAM83BQ5T0W9 1011 aa9.85□□□□□ -0.83
LSM2-213ENST00000491421 CHRDL2Q6WN34 429 aa9.85□□□□□ -0.83
LSM2-213ENST00000491421 DPP9Q86TI2 863 aa9.85□□□□□ -0.83
LSM2-213ENST00000491421 NCAPG2Q86XI2 1143 aa9.85□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms