RNA–Protein interactions for RNA: ENST00000491028.1

MCF2L-230, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 4

Gene MCF2L, Length 573 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-230ENST00000491028 ACER1Q8TDN7 264 aa21.79■■□□□ 1.08
MCF2L-230ENST00000491028 MAP3K14Q99558 947 aa21.79■■□□□ 1.08
MCF2L-230ENST00000491028 FEZ1Q99689 392 aa21.79■■□□□ 1.08
MCF2L-230ENST00000491028 KIAA1683Q9H0B3 1180 aa21.79■■□□□ 1.08
MCF2L-230ENST00000491028 ZHX2Q9Y6X8 837 aa21.79■■□□□ 1.08
MCF2L-230ENST00000491028 PTPRFP10586 1907 aa21.78■■□□□ 1.08
MCF2L-230ENST00000491028 TMEM88BA6NKF7 163 aa21.78■■□□□ 1.08
MCF2L-230ENST00000491028 GOLGA8BA8MQT2 603 aa21.78■■□□□ 1.08
MCF2L-230ENST00000491028 USP17L10C9JJH3 530 aa21.78■■□□□ 1.08
MCF2L-230ENST00000491028 ZBTB43O43298 467 aa21.78■■□□□ 1.08
MCF2L-230ENST00000491028 ANP32AP39687 249 aaKnown RBP21.78■■□□□ 1.08
MCF2L-230ENST00000491028 ECE1P42892 770 aa21.78■■□□□ 1.08
MCF2L-230ENST00000491028 HUNKP57058 714 aa21.78■■□□□ 1.08
MCF2L-230ENST00000491028 NOL8Q76FK4 1167 aaKnown RBP21.78■■□□□ 1.08
MCF2L-230ENST00000491028 HSCBQ8IWL3 235 aa21.78■■□□□ 1.08
MCF2L-230ENST00000491028 SLC10A4Q96EP9 437 aa21.78■■□□□ 1.08
MCF2L-230ENST00000491028 GOPCQ9HD26 462 aa21.78■■□□□ 1.08
MCF2L-230ENST00000491028 SH2B1Q9NRF2 756 aaPredicted RBP21.78■■□□□ 1.08
MCF2L-230ENST00000491028 TPCN1Q9ULQ1 816 aa21.78■■□□□ 1.08
MCF2L-230ENST00000491028 RBM19Q9Y4C8 960 aaKnown RBP21.78■■□□□ 1.08
MCF2L-230ENST00000491028 AFG3L2Q9Y4W6 797 aa21.78■■□□□ 1.08
MCF2L-230ENST00000491028 USP14P54578 494 aa21.77■■□□□ 1.08
MCF2L-230ENST00000491028 TROAPQ12815 778 aa21.77■■□□□ 1.08
MCF2L-230ENST00000491028 PPIL2Q13356 520 aa21.77■■□□□ 1.08
MCF2L-230ENST00000491028 OTUD5Q96G74 571 aa21.77■■□□□ 1.08
MCF2L-230ENST00000491028 VCPKMTQ9H867 229 aa21.77■■□□□ 1.08
MCF2L-230ENST00000491028 TLL2Q9Y6L7 1015 aa21.77■■□□□ 1.08
MCF2L-230ENST00000491028 C19orf81C9J6K1 198 aa21.76■■□□□ 1.07
MCF2L-230ENST00000491028 K7ELQ4 463 aaPredicted RBP21.76■■□□□ 1.07
MCF2L-230ENST00000491028 PDIA3P30101 505 aaKnown RBP21.76■■□□□ 1.07
MCF2L-230ENST00000491028 BACE1P56817 501 aa21.76■■□□□ 1.07
MCF2L-230ENST00000491028 SPP2Q13103 211 aa21.76■■□□□ 1.07
MCF2L-230ENST00000491028 PPP2R5BQ15173 497 aa21.76■■□□□ 1.07
MCF2L-230ENST00000491028 SAPCD2Q86UD0 394 aa21.76■■□□□ 1.07
MCF2L-230ENST00000491028 MICU3Q86XE3 530 aa21.76■■□□□ 1.07
MCF2L-230ENST00000491028 OPTNQ96CV9 577 aa21.76■■□□□ 1.07
MCF2L-230ENST00000491028 LARP6Q9BRS8 491 aaKnown RBP21.76■■□□□ 1.07
MCF2L-230ENST00000491028 NAP1L2Q9ULW6 460 aaPredicted RBP21.76■■□□□ 1.07
MCF2L-230ENST00000491028 LOC285556D6RIA3 1793 aa21.76■■□□□ 1.07
MCF2L-230ENST00000491028 F5H6K3 240 aa21.75■■□□□ 1.07
MCF2L-230ENST00000491028 CXCL11O14625 94 aa21.75■■□□□ 1.07
MCF2L-230ENST00000491028 SNHG28P0DPA3 235 aa21.75■■□□□ 1.07
MCF2L-230ENST00000491028 METAP2P50579 478 aaKnown RBP eCLIP21.75■■□□□ 1.07
MCF2L-230ENST00000491028 KLRC3Q07444 240 aa21.75■■□□□ 1.07
MCF2L-230ENST00000491028 MTMR2Q13614 643 aa21.75■■□□□ 1.07
MCF2L-230ENST00000491028 CTCFLQ8NI51 663 aaPredicted RBP21.75■■□□□ 1.07
MCF2L-230ENST00000491028 DCAF4Q8WV16 495 aa21.75■■□□□ 1.07
MCF2L-230ENST00000491028 LPAR1Q92633 364 aa21.75■■□□□ 1.07
MCF2L-230ENST00000491028 GMCL1Q96IK5 515 aa21.75■■□□□ 1.07
MCF2L-230ENST00000491028 HHIPL1Q96JK4 782 aa21.75■■□□□ 1.07
MCF2L-230ENST00000491028 C12orf42Q96LP6 360 aa21.75■■□□□ 1.07
MCF2L-230ENST00000491028 SLKQ9H2G2 1235 aaPredicted RBP21.75■■□□□ 1.07
MCF2L-230ENST00000491028 KCNH4Q9UQ05 1017 aa21.75■■□□□ 1.07
MCF2L-230ENST00000491028 TRIM75PA6NK02 468 aa21.74■■□□□ 1.07
MCF2L-230ENST00000491028 GOLGA8AA7E2F4 631 aa21.74■■□□□ 1.07
MCF2L-230ENST00000491028 PFKFB2O60825 505 aa21.74■■□□□ 1.07
MCF2L-230ENST00000491028 ZBTB48P10074 688 aaPredicted RBP21.74■■□□□ 1.07
MCF2L-230ENST00000491028 PDHBP11177 359 aa21.74■■□□□ 1.07
MCF2L-230ENST00000491028 KIF5BP33176 963 aa21.74■■□□□ 1.07
MCF2L-230ENST00000491028 BECN1Q14457 450 aa21.74■■□□□ 1.07
MCF2L-230ENST00000491028 GRM4Q14833 912 aa21.74■■□□□ 1.07
MCF2L-230ENST00000491028 ME3Q16798 604 aa21.74■■□□□ 1.07
MCF2L-230ENST00000491028 SH3D19Q5HYK7 790 aa21.74■■□□□ 1.07
MCF2L-230ENST00000491028 SLFN13Q68D06 897 aa21.74■■□□□ 1.07
MCF2L-230ENST00000491028 USP17L2Q6R6M4 530 aa21.74■■□□□ 1.07
MCF2L-230ENST00000491028 NUP133Q8WUM0 1156 aa21.74■■□□□ 1.07
MCF2L-230ENST00000491028 CNKSR2Q8WXI2 1034 aa21.74■■□□□ 1.07
MCF2L-230ENST00000491028 CHMP4CQ96CF2 233 aa21.74■■□□□ 1.07
MCF2L-230ENST00000491028 WNK4Q96J92 1243 aa21.74■■□□□ 1.07
MCF2L-230ENST00000491028 TMX3Q96JJ7 454 aa21.74■■□□□ 1.07
MCF2L-230ENST00000491028 MYL10Q9BUA6 226 aa21.74■■□□□ 1.07
MCF2L-230ENST00000491028 RBM28Q9NW13 759 aaKnown RBP21.74■■□□□ 1.07
MCF2L-230ENST00000491028 HPS5Q9UPZ3 1129 aa21.74■■□□□ 1.07
MCF2L-230ENST00000491028 CCDC196A0A1B0GTZ2 297 aa21.73■■□□□ 1.07
MCF2L-230ENST00000491028 LARGE1O95461 756 aa21.73■■□□□ 1.07
MCF2L-230ENST00000491028 NDUFB10O96000 172 aa21.73■■□□□ 1.07
MCF2L-230ENST00000491028 RTN1Q16799 776 aa21.73■■□□□ 1.07
MCF2L-230ENST00000491028 ASPRV1Q53RT3 343 aa21.73■■□□□ 1.07
MCF2L-230ENST00000491028 RGMBQ6NW40 437 aa21.73■■□□□ 1.07
MCF2L-230ENST00000491028 FANCBQ8NB91 859 aa21.73■■□□□ 1.07
MCF2L-230ENST00000491028 ZBTB4Q9P1Z0 1013 aaPredicted RBP21.73■■□□□ 1.07
MCF2L-230ENST00000491028 ABT1Q9ULW3 272 aaKnown RBP21.73■■□□□ 1.07
MCF2L-230ENST00000491028 IRF6O14896 467 aa21.72■■□□□ 1.07
MCF2L-230ENST00000491028 APLP1P51693 650 aa21.72■■□□□ 1.07
MCF2L-230ENST00000491028 STK3Q13188 491 aa21.72■■□□□ 1.07
MCF2L-230ENST00000491028 ZYXQ15942 572 aaKnown RBP21.72■■□□□ 1.07
MCF2L-230ENST00000491028 GPATCH4Q5T3I0 446 aaKnown RBP21.72■■□□□ 1.07
MCF2L-230ENST00000491028 GTF3C6Q969F1 213 aa21.72■■□□□ 1.07
MCF2L-230ENST00000491028 A0A0G2JLL6 359 aaPredicted RBP21.71■■□□□ 1.07
MCF2L-230ENST00000491028 WDR46O15213 610 aaKnown RBP21.71■■□□□ 1.07
MCF2L-230ENST00000491028 RAD21O60216 631 aa21.71■■□□□ 1.07
MCF2L-230ENST00000491028 DHX16O60231 1041 aaKnown RBP21.71■■□□□ 1.07
MCF2L-230ENST00000491028 PARP1P09874 1014 aaKnown RBP21.71■■□□□ 1.07
MCF2L-230ENST00000491028 RXRAP19793 462 aa21.71■■□□□ 1.07
MCF2L-230ENST00000491028 GJA5P36382 358 aa21.71■■□□□ 1.07
MCF2L-230ENST00000491028 SLC1A4P43007 532 aa21.71■■□□□ 1.07
MCF2L-230ENST00000491028 ZNF543Q08ER8 600 aa21.71■■□□□ 1.07
MCF2L-230ENST00000491028 SPRYD7Q5W111 196 aa21.71■■□□□ 1.07
MCF2L-230ENST00000491028 PRRT2Q7Z6L0 340 aaPredicted RBP21.71■■□□□ 1.07
MCF2L-230ENST00000491028 RAB11FIP4Q86YS3 637 aa21.71■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms