RNA–Protein interactions for RNA: ENST00000490663.1

C4A-256, Transcript of complement C4A (Rodgers blood group), humanhuman

TSL 2

Gene C4A, Length 524 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C4A-256ENST00000490663 PABPC4Q13310 644 aaKnown RBP eCLIP22.03■■□□□ 1.12
C4A-256ENST00000490663 LRRC47Q8N1G4 583 aaKnown RBP22.03■■□□□ 1.12
C4A-256ENST00000490663 ERO1AQ96HE7 468 aa22.03■■□□□ 1.12
C4A-256ENST00000490663 KANSL2Q9H9L4 492 aa22.03■■□□□ 1.12
C4A-256ENST00000490663 ZNF287Q9HBT7 754 aa22.03■■□□□ 1.12
C4A-256ENST00000490663 TMX2Q9Y320 296 aa22.03■■□□□ 1.12
C4A-256ENST00000490663 TSPY2A6NKD2 308 aa22.02■■□□□ 1.12
C4A-256ENST00000490663 LACTBP83111 547 aaPredicted RBP22.02■■□□□ 1.12
C4A-256ENST00000490663 ERICH6BQ5W0A0 696 aa22.02■■□□□ 1.12
C4A-256ENST00000490663 OTOP1Q7RTM1 612 aa22.02■■□□□ 1.12
C4A-256ENST00000490663 NEDD1Q8NHV4 660 aa22.02■■□□□ 1.12
C4A-256ENST00000490663 NUP88Q99567 741 aaPredicted RBP22.02■■□□□ 1.12
C4A-256ENST00000490663 TANGO6Q9C0B7 1094 aa22.02■■□□□ 1.12
C4A-256ENST00000490663 VCPKMTQ9H867 229 aa22.02■■□□□ 1.12
C4A-256ENST00000490663 CLIP2Q9UDT6 1046 aa22.02■■□□□ 1.12
C4A-256ENST00000490663 HOXA7P31268 230 aaPredicted RBP22.01■■□□□ 1.11
C4A-256ENST00000490663 HERVK_113P62684 666 aa22.01■■□□□ 1.11
C4A-256ENST00000490663 POTEEQ6S8J3 1075 aa22.01■■□□□ 1.11
C4A-256ENST00000490663 ESYT1Q9BSJ8 1104 aa22.01■■□□□ 1.11
C4A-256ENST00000490663 PAGR1Q9BTK6 254 aa22.01■■□□□ 1.11
C4A-256ENST00000490663 USP17L15C9J2P7 530 aa22■■□□□ 1.11
C4A-256ENST00000490663 USP17L13C9JLJ4 530 aa22■■□□□ 1.11
C4A-256ENST00000490663 USP17L11C9JVI0 530 aa22■■□□□ 1.11
C4A-256ENST00000490663 USP17L18D6R9N7 530 aa22■■□□□ 1.11
C4A-256ENST00000490663 USP17L22D6RA61 530 aa22■■□□□ 1.11
C4A-256ENST00000490663 USP17L17D6RBQ6 530 aa22■■□□□ 1.11
C4A-256ENST00000490663 USP17L19D6RCP7 530 aa22■■□□□ 1.11
C4A-256ENST00000490663 USP17L20D6RJB6 530 aa22■■□□□ 1.11
C4A-256ENST00000490663 ZNF213O14771 459 aa22■■□□□ 1.11
C4A-256ENST00000490663 ORC4O43929 436 aa22■■□□□ 1.11
C4A-256ENST00000490663 USP17L24Q0WX57 530 aa22■■□□□ 1.11
C4A-256ENST00000490663 AKNAD1Q5T1N1 836 aa22■■□□□ 1.11
C4A-256ENST00000490663 RASGRP2Q7LDG7 609 aa22■■□□□ 1.11
C4A-256ENST00000490663 SH2D4AQ9H788 454 aa22■■□□□ 1.11
C4A-256ENST00000490663 TXNRD2Q9NNW7 524 aa22■■□□□ 1.11
C4A-256ENST00000490663 IL17RBQ9NRM6 502 aa22■■□□□ 1.11
C4A-256ENST00000490663 MTMR4Q9NYA4 1195 aa22■■□□□ 1.11
C4A-256ENST00000490663 TAF6LQ9Y6J9 622 aa22■■□□□ 1.11
C4A-256ENST00000490663 CAPN15O75808 1086 aa21.99■■□□□ 1.11
C4A-256ENST00000490663 CATSPERGQ6ZRH7 1159 aa21.99■■□□□ 1.11
C4A-256ENST00000490663 MFSD6Q6ZSS7 791 aa21.99■■□□□ 1.11
C4A-256ENST00000490663 STAG1Q8WVM7 1258 aa21.99■■□□□ 1.11
C4A-256ENST00000490663 TRIM47Q96LD4 638 aa21.99■■□□□ 1.11
C4A-256ENST00000490663 EFCC1Q9HA90 598 aa21.99■■□□□ 1.11
C4A-256ENST00000490663 NYAP2Q9P242 653 aa21.99■■□□□ 1.11
C4A-256ENST00000490663 MCM3APO60318 1980 aa21.99■■□□□ 1.11
C4A-256ENST00000490663 RBBP6Q7Z6E9 1792 aaKnown RBP21.98■■□□□ 1.11
C4A-256ENST00000490663 FGRP09769 529 aa21.98■■□□□ 1.11
C4A-256ENST00000490663 PSMC4P43686 418 aa21.98■■□□□ 1.11
C4A-256ENST00000490663 IMMTQ16891 758 aaKnown RBP21.98■■□□□ 1.11
C4A-256ENST00000490663 FAM83BQ5T0W9 1011 aa21.98■■□□□ 1.11
C4A-256ENST00000490663 ZKSCAN3Q9BRR0 538 aa21.98■■□□□ 1.11
C4A-256ENST00000490663 FBXO28Q9NVF7 368 aa21.98■■□□□ 1.11
C4A-256ENST00000490663 MTMR7Q9Y216 660 aa21.98■■□□□ 1.11
C4A-256ENST00000490663 BAZ2BQ9UIF8 2168 aaKnown RBP21.97■■□□□ 1.11
C4A-256ENST00000490663 SPDYE16A6NNV3 312 aaPredicted RBP21.97■■□□□ 1.11
C4A-256ENST00000490663 B4E1Z4 1266 aa21.97■■□□□ 1.11
C4A-256ENST00000490663 CDC45O75419 566 aa21.97■■□□□ 1.11
C4A-256ENST00000490663 NDUFB10O96000 172 aa21.97■■□□□ 1.11
C4A-256ENST00000490663 KIF22Q14807 665 aa21.97■■□□□ 1.11
C4A-256ENST00000490663 GOPCQ9HD26 462 aa21.97■■□□□ 1.11
C4A-256ENST00000490663 STX8Q9UNK0 236 aa21.97■■□□□ 1.11
C4A-256ENST00000490663 CENPFP49454 3210 aa21.97■■□□□ 1.11
C4A-256ENST00000490663 CNMDO75829 334 aa21.96■■□□□ 1.11
C4A-256ENST00000490663 FMNL1O95466 1100 aaPredicted RBP21.96■■□□□ 1.11
C4A-256ENST00000490663 TTLL1O95922 423 aa21.96■■□□□ 1.11
C4A-256ENST00000490663 FAM110CQ1W6H9 321 aa21.96■■□□□ 1.11
C4A-256ENST00000490663 ABHD8Q96I13 439 aa21.96■■□□□ 1.11
C4A-256ENST00000490663 LSG1Q9H089 658 aaKnown RBP21.96■■□□□ 1.11
C4A-256ENST00000490663 RBPJLQ9UBG7 517 aa21.96■■□□□ 1.11
C4A-256ENST00000490663 RBM8AQ9Y5S9 174 aaKnown RBP21.96■■□□□ 1.11
C4A-256ENST00000490663 FRMPD3Q5JV73 1810 aa21.96■■□□□ 1.11
C4A-256ENST00000490663 F5H6K3 240 aa21.95■■□□□ 1.1
C4A-256ENST00000490663 WDR46O15213 610 aaKnown RBP21.95■■□□□ 1.1
C4A-256ENST00000490663 KDM4AO75164 1064 aa21.95■■□□□ 1.1
C4A-256ENST00000490663 FLOT1O75955 427 aa21.95■■□□□ 1.1
C4A-256ENST00000490663 CYP21A2P08686 494 aa21.95■■□□□ 1.1
C4A-256ENST00000490663 GCLCP48506 637 aaPredicted RBP21.95■■□□□ 1.1
C4A-256ENST00000490663 KLRC3Q07444 240 aa21.95■■□□□ 1.1
C4A-256ENST00000490663 LPAR1Q92633 364 aa21.95■■□□□ 1.1
C4A-256ENST00000490663 ATG4CQ96DT6 458 aa21.95■■□□□ 1.1
C4A-256ENST00000490663 CTNNA3Q9UI47 895 aa21.95■■□□□ 1.1
C4A-256ENST00000490663 ISY1Q9ULR0 285 aaKnown RBP21.95■■□□□ 1.1
C4A-256ENST00000490663 PTCH2Q9Y6C5 1203 aa21.95■■□□□ 1.1
C4A-256ENST00000490663 LCTP09848 1927 aa21.94■■□□□ 1.1
C4A-256ENST00000490663 Q3C1V9 767 aa21.94■■□□□ 1.1
C4A-256ENST00000490663 RNF41Q9H4P4 317 aaPredicted RBP21.94■■□□□ 1.1
C4A-256ENST00000490663 ANO2Q9NQ90 1003 aa21.94■■□□□ 1.1
C4A-256ENST00000490663 BTBD7Q9P203 1132 aa21.94■■□□□ 1.1
C4A-256ENST00000490663 GABRQQ9UN88 632 aa21.94■■□□□ 1.1
C4A-256ENST00000490663 U3KPZ7 1027 aaPredicted RBP21.94■■□□□ 1.1
C4A-256ENST00000490663 ERVK-9P63128 1117 aa21.93■■□□□ 1.1
C4A-256ENST00000490663 ERVK-24P63145 666 aa21.93■■□□□ 1.1
C4A-256ENST00000490663 FBXO46Q6PJ61 603 aaPredicted RBP21.93■■□□□ 1.1
C4A-256ENST00000490663 STOX1Q6ZVD7 989 aa21.93■■□□□ 1.1
C4A-256ENST00000490663 PORCNQ9H237 461 aa21.93■■□□□ 1.1
C4A-256ENST00000490663 MORF4L1Q9UBU8 362 aa21.93■■□□□ 1.1
C4A-256ENST00000490663 ZNF236Q9UL36 1845 aa21.93■■□□□ 1.1
C4A-256ENST00000490663 HPS5Q9UPZ3 1129 aa21.93■■□□□ 1.1
C4A-256ENST00000490663 PTPN22Q9Y2R2 807 aa21.93■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms