RNA–Protein interactions for RNA: ENST00000489676.1

TFF3-203, Transcript of trefoil factor 3, humanhuman

TSL 2

Gene TFF3, Length 419 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TFF3-203ENST00000489676 RASGRP2Q7LDG7 609 aa12.79□□□□□ -0.36
TFF3-203ENST00000489676 ZNF280CQ8ND82 737 aa12.79□□□□□ -0.36
TFF3-203ENST00000489676 PNMA1Q8ND90 353 aa12.79□□□□□ -0.36
TFF3-203ENST00000489676 OTUD5Q96G74 571 aa12.79□□□□□ -0.36
TFF3-203ENST00000489676 AS3MTQ9HBK9 375 aa12.79□□□□□ -0.36
TFF3-203ENST00000489676 ARHGEF10LQ9HCE6 1279 aa12.79□□□□□ -0.36
TFF3-203ENST00000489676 CREBZFQ9NS37 354 aa12.79□□□□□ -0.36
TFF3-203ENST00000489676 CLIP2Q9UDT6 1046 aa12.79□□□□□ -0.36
TFF3-203ENST00000489676 BRPF3Q9ULD4 1205 aa12.79□□□□□ -0.36
TFF3-203ENST00000489676 ZHX2Q9Y6X8 837 aa12.79□□□□□ -0.36
TFF3-203ENST00000489676 RASSF10A6NK89 507 aa12.78□□□□□ -0.36
TFF3-203ENST00000489676 FAM155AB1AL88 458 aaPredicted RBP12.78□□□□□ -0.36
TFF3-203ENST00000489676 IRF6O14896 467 aa12.78□□□□□ -0.36
TFF3-203ENST00000489676 SLC10A3P09131 477 aa12.78□□□□□ -0.36
TFF3-203ENST00000489676 BACE1P56817 501 aa12.78□□□□□ -0.36
TFF3-203ENST00000489676 TROAPQ12815 778 aa12.78□□□□□ -0.36
TFF3-203ENST00000489676 SPP2Q13103 211 aa12.78□□□□□ -0.36
TFF3-203ENST00000489676 MTMR2Q13614 643 aa12.78□□□□□ -0.36
TFF3-203ENST00000489676 MOGSQ13724 837 aa12.78□□□□□ -0.36
TFF3-203ENST00000489676 SH3D19Q5HYK7 790 aa12.78□□□□□ -0.36
TFF3-203ENST00000489676 SPRYD7Q5W111 196 aa12.78□□□□□ -0.36
TFF3-203ENST00000489676 ZNF654Q8IZM8 581 aa12.78□□□□□ -0.36
TFF3-203ENST00000489676 TMTC2Q8N394 836 aa12.78□□□□□ -0.36
TFF3-203ENST00000489676 GMCL1P1Q8NEA9 526 aa12.78□□□□□ -0.36
TFF3-203ENST00000489676 C12orf42Q96LP6 360 aa12.78□□□□□ -0.36
TFF3-203ENST00000489676 SH2D4AQ9H788 454 aa12.78□□□□□ -0.36
TFF3-203ENST00000489676 RLFQ13129 1914 aa12.78□□□□□ -0.36
TFF3-203ENST00000489676 A0A0G2JLL6 359 aaPredicted RBP12.77□□□□□ -0.37
TFF3-203ENST00000489676 TRIM75PA6NK02 468 aa12.77□□□□□ -0.37
TFF3-203ENST00000489676 USP17L10C9JJH3 530 aa12.77□□□□□ -0.37
TFF3-203ENST00000489676 CXCL11O14625 94 aa12.77□□□□□ -0.37
TFF3-203ENST00000489676 DDAH1O94760 285 aa12.77□□□□□ -0.37
TFF3-203ENST00000489676 NDUFB10O96000 172 aa12.77□□□□□ -0.37
TFF3-203ENST00000489676 ZBTB48P10074 688 aaPredicted RBP12.77□□□□□ -0.37
TFF3-203ENST00000489676 PDHBP11177 359 aa12.77□□□□□ -0.37
TFF3-203ENST00000489676 RCAN1P53805 252 aa12.77□□□□□ -0.37
TFF3-203ENST00000489676 ATP2B2Q01814 1243 aa12.77□□□□□ -0.37
TFF3-203ENST00000489676 APOBRQ0VD83 1088 aa12.77□□□□□ -0.37
TFF3-203ENST00000489676 DGKZQ13574 1117 aa12.77□□□□□ -0.37
TFF3-203ENST00000489676 RGMBQ6NW40 437 aa12.77□□□□□ -0.37
TFF3-203ENST00000489676 PRRT2Q7Z6L0 340 aaPredicted RBP12.77□□□□□ -0.37
TFF3-203ENST00000489676 SLC10A4Q96EP9 437 aa12.77□□□□□ -0.37
TFF3-203ENST00000489676 GMCL1Q96IK5 515 aa12.77□□□□□ -0.37
TFF3-203ENST00000489676 MS4A4AQ96JQ5 239 aa12.77□□□□□ -0.37
TFF3-203ENST00000489676 VCPKMTQ9H867 229 aa12.77□□□□□ -0.37
TFF3-203ENST00000489676 KAT14Q9H8E8 782 aa12.77□□□□□ -0.37
TFF3-203ENST00000489676 TSHZ2Q9NRE2 1034 aa12.77□□□□□ -0.37
TFF3-203ENST00000489676 TPCN1Q9ULQ1 816 aa12.77□□□□□ -0.37
TFF3-203ENST00000489676 HPS5Q9UPZ3 1129 aa12.77□□□□□ -0.37
TFF3-203ENST00000489676 A0A0G2JMZ2 1700 aa12.76□□□□□ -0.37
TFF3-203ENST00000489676 KLF18A0A0U1RQI7 1052 aa12.76□□□□□ -0.37
TFF3-203ENST00000489676 F5H6K3 240 aa12.76□□□□□ -0.37
TFF3-203ENST00000489676 ST18O60284 1047 aa12.76□□□□□ -0.37
TFF3-203ENST00000489676 LARGE1O95461 756 aa12.76□□□□□ -0.37
TFF3-203ENST00000489676 KLRC3Q07444 240 aa12.76□□□□□ -0.37
TFF3-203ENST00000489676 ANKRD1Q15327 319 aa12.76□□□□□ -0.37
TFF3-203ENST00000489676 LPAR1Q92633 364 aa12.76□□□□□ -0.37
TFF3-203ENST00000489676 FEZ1Q99689 392 aa12.76□□□□□ -0.37
TFF3-203ENST00000489676 LARP6Q9BRS8 491 aaKnown RBP12.76□□□□□ -0.37
TFF3-203ENST00000489676 MYL10Q9BUA6 226 aa12.76□□□□□ -0.37
TFF3-203ENST00000489676 EMILIN3Q9NT22 766 aa12.76□□□□□ -0.37
TFF3-203ENST00000489676 ABT1Q9ULW3 272 aaKnown RBP12.76□□□□□ -0.37
TFF3-203ENST00000489676 CCDC69A6NI79 296 aa12.75□□□□□ -0.37
TFF3-203ENST00000489676 GOLGA8BA8MQT2 603 aa12.75□□□□□ -0.37
TFF3-203ENST00000489676 C19orf81C9J6K1 198 aa12.75□□□□□ -0.37
TFF3-203ENST00000489676 HSPA1AP0DMV8 641 aaKnown RBP12.75□□□□□ -0.37
TFF3-203ENST00000489676 HSPA1BP0DMV9 641 aaKnown RBP12.75□□□□□ -0.37
TFF3-203ENST00000489676 VCAM1P19320 739 aa12.75□□□□□ -0.37
TFF3-203ENST00000489676 PDIA3P30101 505 aaKnown RBP12.75□□□□□ -0.37
TFF3-203ENST00000489676 ZNF157P51786 506 aaPredicted RBP12.75□□□□□ -0.37
TFF3-203ENST00000489676 USP14P54578 494 aa12.75□□□□□ -0.37
TFF3-203ENST00000489676 HMGCS2P54868 508 aa12.75□□□□□ -0.37
TFF3-203ENST00000489676 FGD1P98174 961 aa12.75□□□□□ -0.37
TFF3-203ENST00000489676 ST3GAL1Q11201 340 aa12.75□□□□□ -0.37
TFF3-203ENST00000489676 GRM4Q14833 912 aa12.75□□□□□ -0.37
TFF3-203ENST00000489676 ZYXQ15942 572 aaKnown RBP12.75□□□□□ -0.37
TFF3-203ENST00000489676 USP17L2Q6R6M4 530 aa12.75□□□□□ -0.37
TFF3-203ENST00000489676 MICU3Q86XE3 530 aa12.75□□□□□ -0.37
TFF3-203ENST00000489676 SNX21Q969T3 373 aa12.75□□□□□ -0.37
TFF3-203ENST00000489676 ZNF274Q96GC6 653 aaPredicted RBP12.75□□□□□ -0.37
TFF3-203ENST00000489676 MAP3K14Q99558 947 aa12.75□□□□□ -0.37
TFF3-203ENST00000489676 GOPCQ9HD26 462 aa12.75□□□□□ -0.37
TFF3-203ENST00000489676 SLC12A7Q9Y666 1083 aa12.75□□□□□ -0.37
TFF3-203ENST00000489676 WDR46O15213 610 aaKnown RBP12.74□□□□□ -0.37
TFF3-203ENST00000489676 RXRAP19793 462 aa12.74□□□□□ -0.37
TFF3-203ENST00000489676 MCM2P49736 904 aa12.74□□□□□ -0.37
TFF3-203ENST00000489676 ZNF543Q08ER8 600 aa12.74□□□□□ -0.37
TFF3-203ENST00000489676 SNAPC2Q13487 334 aa12.74□□□□□ -0.37
TFF3-203ENST00000489676 ME3Q16798 604 aa12.74□□□□□ -0.37
TFF3-203ENST00000489676 SLC35G1Q2M3R5 365 aa12.74□□□□□ -0.37
TFF3-203ENST00000489676 SLFN13Q68D06 897 aa12.74□□□□□ -0.37
TFF3-203ENST00000489676 NFXL1Q6ZNB6 911 aa12.74□□□□□ -0.37
TFF3-203ENST00000489676 CATIPQ7Z7H3 387 aa12.74□□□□□ -0.37
TFF3-203ENST00000489676 RAB11FIP4Q86YS3 637 aa12.74□□□□□ -0.37
TFF3-203ENST00000489676 SPICE1Q8N0Z3 855 aa12.74□□□□□ -0.37
TFF3-203ENST00000489676 PROCA1Q8NCQ7 364 aaPredicted RBP12.74□□□□□ -0.37
TFF3-203ENST00000489676 DCAF4Q8WV16 495 aa12.74□□□□□ -0.37
TFF3-203ENST00000489676 BRI3BPQ8WY22 251 aa12.74□□□□□ -0.37
TFF3-203ENST00000489676 NUP88Q99567 741 aaPredicted RBP12.74□□□□□ -0.37
TFF3-203ENST00000489676 FAM217BQ9NTX9 383 aaPredicted RBP12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms