RNA–Protein interactions for RNA: ENST00000489503.5

SMARCD3-213, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 3

Gene SMARCD3, Length 378 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-213ENST00000489503 PPP4R2Q9NY27 417 aa14.56□□□□□ -0.08
SMARCD3-213ENST00000489503 TMX2Q9Y320 296 aa14.56□□□□□ -0.08
SMARCD3-213ENST00000489503 NEDD4P46934 1319 aa14.56□□□□□ -0.08
SMARCD3-213ENST00000489503 RLFQ13129 1914 aa14.56□□□□□ -0.08
SMARCD3-213ENST00000489503 A0A0G2JMZ2 1700 aa14.55□□□□□ -0.08
SMARCD3-213ENST00000489503 SGSM2O43147 1006 aa14.55□□□□□ -0.08
SMARCD3-213ENST00000489503 RANBP6O60518 1105 aaKnown RBP14.55□□□□□ -0.08
SMARCD3-213ENST00000489503 PSMC4P43686 418 aa14.55□□□□□ -0.08
SMARCD3-213ENST00000489503 BMP2KLQ5H9B9 411 aa14.55□□□□□ -0.08
SMARCD3-213ENST00000489503 RASGRP2Q7LDG7 609 aa14.55□□□□□ -0.08
SMARCD3-213ENST00000489503 NEDD1Q8NHV4 660 aa14.55□□□□□ -0.08
SMARCD3-213ENST00000489503 NUP88Q99567 741 aaPredicted RBP14.55□□□□□ -0.08
SMARCD3-213ENST00000489503 DSCC1Q9BVC3 393 aa14.55□□□□□ -0.08
SMARCD3-213ENST00000489503 SH2D4AQ9H788 454 aa14.55□□□□□ -0.08
SMARCD3-213ENST00000489503 ZNF287Q9HBT7 754 aa14.55□□□□□ -0.08
SMARCD3-213ENST00000489503 TSPY2A6NKD2 308 aa14.54□□□□□ -0.08
SMARCD3-213ENST00000489503 USP17L15C9J2P7 530 aa14.54□□□□□ -0.08
SMARCD3-213ENST00000489503 USP17L13C9JLJ4 530 aa14.54□□□□□ -0.08
SMARCD3-213ENST00000489503 USP17L11C9JVI0 530 aa14.54□□□□□ -0.08
SMARCD3-213ENST00000489503 USP17L18D6R9N7 530 aa14.54□□□□□ -0.08
SMARCD3-213ENST00000489503 USP17L22D6RA61 530 aa14.54□□□□□ -0.08
SMARCD3-213ENST00000489503 USP17L17D6RBQ6 530 aa14.54□□□□□ -0.08
SMARCD3-213ENST00000489503 USP17L19D6RCP7 530 aa14.54□□□□□ -0.08
SMARCD3-213ENST00000489503 USP17L20D6RJB6 530 aa14.54□□□□□ -0.08
SMARCD3-213ENST00000489503 ORC4O43929 436 aa14.54□□□□□ -0.08
SMARCD3-213ENST00000489503 USP17L24Q0WX57 530 aa14.54□□□□□ -0.08
SMARCD3-213ENST00000489503 KIF22Q14807 665 aa14.54□□□□□ -0.08
SMARCD3-213ENST00000489503 CATSPERGQ6ZRH7 1159 aa14.54□□□□□ -0.08
SMARCD3-213ENST00000489503 RUFY2Q8WXA3 655 aa14.54□□□□□ -0.08
SMARCD3-213ENST00000489503 MTMR4Q9NYA4 1195 aa14.54□□□□□ -0.08
SMARCD3-213ENST00000489503 CLIP2Q9UDT6 1046 aa14.54□□□□□ -0.08
SMARCD3-213ENST00000489503 SPDYE16A6NNV3 312 aaPredicted RBP14.53□□□□□ -0.08
SMARCD3-213ENST00000489503 FMNL1O95466 1100 aaPredicted RBP14.53□□□□□ -0.08
SMARCD3-213ENST00000489503 NDUFB10O96000 172 aa14.53□□□□□ -0.08
SMARCD3-213ENST00000489503 GCLCP48506 637 aaPredicted RBP14.53□□□□□ -0.08
SMARCD3-213ENST00000489503 FAM110CQ1W6H9 321 aa14.53□□□□□ -0.08
SMARCD3-213ENST00000489503 FAM83BQ5T0W9 1011 aa14.53□□□□□ -0.08
SMARCD3-213ENST00000489503 AKNAD1Q5T1N1 836 aa14.53□□□□□ -0.08
SMARCD3-213ENST00000489503 FBXO46Q6PJ61 603 aaPredicted RBP14.53□□□□□ -0.08
SMARCD3-213ENST00000489503 STAG1Q8WVM7 1258 aa14.53□□□□□ -0.08
SMARCD3-213ENST00000489503 IL17RBQ9NRM6 502 aa14.53□□□□□ -0.08
SMARCD3-213ENST00000489503 FBXO28Q9NVF7 368 aa14.53□□□□□ -0.08
SMARCD3-213ENST00000489503 NYAP2Q9P242 653 aa14.53□□□□□ -0.08
SMARCD3-213ENST00000489503 HPS5Q9UPZ3 1129 aa14.53□□□□□ -0.08
SMARCD3-213ENST00000489503 PTCH2Q9Y6C5 1203 aa14.53□□□□□ -0.08
SMARCD3-213ENST00000489503 TAF6LQ9Y6J9 622 aa14.53□□□□□ -0.08
SMARCD3-213ENST00000489503 COL11A1P12107 1806 aaPredicted RBP14.52□□□□□ -0.08
SMARCD3-213ENST00000489503 ZNF213O14771 459 aa14.52□□□□□ -0.09
SMARCD3-213ENST00000489503 WDR46O15213 610 aaKnown RBP14.52□□□□□ -0.09
SMARCD3-213ENST00000489503 CNMDO75829 334 aa14.52□□□□□ -0.09
SMARCD3-213ENST00000489503 TTLL1O95922 423 aa14.52□□□□□ -0.09
SMARCD3-213ENST00000489503 FGRP09769 529 aa14.52□□□□□ -0.09
SMARCD3-213ENST00000489503 MFSD6Q6ZSS7 791 aa14.52□□□□□ -0.09
SMARCD3-213ENST00000489503 LPAR1Q92633 364 aa14.52□□□□□ -0.09
SMARCD3-213ENST00000489503 ATG4CQ96DT6 458 aa14.52□□□□□ -0.09
SMARCD3-213ENST00000489503 ESYT1Q9BSJ8 1104 aa14.52□□□□□ -0.09
SMARCD3-213ENST00000489503 GOPCQ9HD26 462 aa14.52□□□□□ -0.09
SMARCD3-213ENST00000489503 RBPJLQ9UBG7 517 aa14.52□□□□□ -0.09
SMARCD3-213ENST00000489503 MTMR7Q9Y216 660 aa14.52□□□□□ -0.09
SMARCD3-213ENST00000489503 PTPN22Q9Y2R2 807 aa14.52□□□□□ -0.09
SMARCD3-213ENST00000489503 DOCK3Q8IZD9 2030 aa14.52□□□□□ -0.09
SMARCD3-213ENST00000489503 MYPNQ86TC9 1320 aa14.51□□□□□ -0.09
SMARCD3-213ENST00000489503 B4E1Z4 1266 aa14.51□□□□□ -0.09
SMARCD3-213ENST00000489503 FLOT1O75955 427 aa14.51□□□□□ -0.09
SMARCD3-213ENST00000489503 FCGRTP55899 365 aa14.51□□□□□ -0.09
SMARCD3-213ENST00000489503 PRKCZQ05513 592 aa14.51□□□□□ -0.09
SMARCD3-213ENST00000489503 IMMTQ16891 758 aaKnown RBP14.51□□□□□ -0.09
SMARCD3-213ENST00000489503 ZKSCAN3Q9BRR0 538 aa14.51□□□□□ -0.09
SMARCD3-213ENST00000489503 PORCNQ9H237 461 aa14.51□□□□□ -0.09
SMARCD3-213ENST00000489503 BTBD7Q9P203 1132 aa14.51□□□□□ -0.09
SMARCD3-213ENST00000489503 MORF4L1Q9UBU8 362 aa14.51□□□□□ -0.09
SMARCD3-213ENST00000489503 GABRQQ9UN88 632 aa14.51□□□□□ -0.09
SMARCD3-213ENST00000489503 STX8Q9UNK0 236 aa14.51□□□□□ -0.09
SMARCD3-213ENST00000489503 HTTP42858 3142 aa14.51□□□□□ -0.09
SMARCD3-213ENST00000489503 PLXNB2O15031 1838 aa14.5□□□□□ -0.09
SMARCD3-213ENST00000489503 CCDC85CA6NKD9 419 aa14.5□□□□□ -0.09
SMARCD3-213ENST00000489503 F5H6K3 240 aa14.5□□□□□ -0.09
SMARCD3-213ENST00000489503 TNPO2O14787 897 aaKnown RBP14.5□□□□□ -0.09
SMARCD3-213ENST00000489503 ERVK-9P63128 1117 aa14.5□□□□□ -0.09
SMARCD3-213ENST00000489503 ERVK-24P63145 666 aa14.5□□□□□ -0.09
SMARCD3-213ENST00000489503 KLRC3Q07444 240 aa14.5□□□□□ -0.09
SMARCD3-213ENST00000489503 PKN2Q16513 984 aaKnown RBP14.5□□□□□ -0.09
SMARCD3-213ENST00000489503 Q3C1V9 767 aa14.5□□□□□ -0.09
SMARCD3-213ENST00000489503 ERICH6BQ5W0A0 696 aa14.5□□□□□ -0.09
SMARCD3-213ENST00000489503 SRRDQ9UH36 339 aa14.5□□□□□ -0.09
SMARCD3-213ENST00000489503 CTNNA3Q9UI47 895 aa14.5□□□□□ -0.09
SMARCD3-213ENST00000489503 ISY1Q9ULR0 285 aaKnown RBP14.5□□□□□ -0.09
SMARCD3-213ENST00000489503 KDM4AO75164 1064 aa14.49□□□□□ -0.09
SMARCD3-213ENST00000489503 CDC45O75419 566 aa14.49□□□□□ -0.09
SMARCD3-213ENST00000489503 CYP21A2P08686 494 aa14.49□□□□□ -0.09
SMARCD3-213ENST00000489503 SLFN13Q68D06 897 aa14.49□□□□□ -0.09
SMARCD3-213ENST00000489503 GPRC5AQ8NFJ5 357 aa14.49□□□□□ -0.09
SMARCD3-213ENST00000489503 LSG1Q9H089 658 aaKnown RBP14.49□□□□□ -0.09
SMARCD3-213ENST00000489503 RNF41Q9H4P4 317 aaPredicted RBP14.49□□□□□ -0.09
SMARCD3-213ENST00000489503 RBM8AQ9Y5S9 174 aaKnown RBP14.49□□□□□ -0.09
SMARCD3-213ENST00000489503 MYCP01106 439 aaPredicted RBP14.48□□□□□ -0.09
SMARCD3-213ENST00000489503 DSG3P32926 999 aa14.48□□□□□ -0.09
SMARCD3-213ENST00000489503 COG2Q14746 738 aa14.48□□□□□ -0.09
SMARCD3-213ENST00000489503 ARHGEF6Q15052 776 aa14.48□□□□□ -0.09
SMARCD3-213ENST00000489503 STOX1Q6ZVD7 989 aa14.48□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms