RNA–Protein interactions for RNA: ENST00000487894.5

HMG20B-212, Transcript of high mobility group 20B, humanhuman

TSL 2

Gene HMG20B, Length 1,242 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20B-212ENST00000487894 FGAP02671 866 aa20.28■□□□□ 0.84
HMG20B-212ENST00000487894 SLC3A2P08195 630 aaKnown RBP20.28■□□□□ 0.84
HMG20B-212ENST00000487894 MFAP1P55081 439 aaKnown RBP20.28■□□□□ 0.84
HMG20B-212ENST00000487894 FCGRTP55899 365 aa20.28■□□□□ 0.84
HMG20B-212ENST00000487894 CTDSPL2Q05D32 466 aa20.28■□□□□ 0.84
HMG20B-212ENST00000487894 PDE4BQ07343 736 aa20.28■□□□□ 0.84
HMG20B-212ENST00000487894 POTEEQ6S8J3 1075 aa20.28■□□□□ 0.84
HMG20B-212ENST00000487894 CATSPERGQ6ZRH7 1159 aa20.28■□□□□ 0.84
HMG20B-212ENST00000487894 VCPKMTQ9H867 229 aa20.28■□□□□ 0.84
HMG20B-212ENST00000487894 SRRDQ9UH36 339 aa20.28■□□□□ 0.84
HMG20B-212ENST00000487894 TACC3Q9Y6A5 838 aa20.28■□□□□ 0.84
HMG20B-212ENST00000487894 PEX10O60683 326 aa20.27■□□□□ 0.84
HMG20B-212ENST00000487894 PRMT2P55345 433 aa20.27■□□□□ 0.84
HMG20B-212ENST00000487894 ZNF444Q8N0Y2 327 aaPredicted RBP20.27■□□□□ 0.84
HMG20B-212ENST00000487894 TXNRD2Q9NNW7 524 aa20.27■□□□□ 0.84
HMG20B-212ENST00000487894 MYPNQ86TC9 1320 aa20.27■□□□□ 0.83
HMG20B-212ENST00000487894 ATP2B2Q01814 1243 aa20.26■□□□□ 0.83
HMG20B-212ENST00000487894 GTF3C2Q8WUA4 911 aaPredicted RBP20.26■□□□□ 0.83
HMG20B-212ENST00000487894 LPAR1Q92633 364 aa20.26■□□□□ 0.83
HMG20B-212ENST00000487894 IL25Q9H293 177 aa20.26■□□□□ 0.83
HMG20B-212ENST00000487894 RBPJLQ9UBG7 517 aa20.26■□□□□ 0.83
HMG20B-212ENST00000487894 PRKCZQ05513 592 aa20.25■□□□□ 0.83
HMG20B-212ENST00000487894 FAM47AQ5JRC9 791 aa20.25■□□□□ 0.83
HMG20B-212ENST00000487894 LBX2Q6XYB7 198 aa20.25■□□□□ 0.83
HMG20B-212ENST00000487894 SPICE1Q8N0Z3 855 aa20.25■□□□□ 0.83
HMG20B-212ENST00000487894 NEDD1Q8NHV4 660 aa20.25■□□□□ 0.83
HMG20B-212ENST00000487894 INCENPQ9NQS7 918 aa20.25■□□□□ 0.83
HMG20B-212ENST00000487894 NYAP2Q9P242 653 aa20.25■□□□□ 0.83
HMG20B-212ENST00000487894 GABRQQ9UN88 632 aa20.25■□□□□ 0.83
HMG20B-212ENST00000487894 BRCA2P51587 3418 aa20.25■□□□□ 0.83
HMG20B-212ENST00000487894 SPDYE16A6NNV3 312 aaPredicted RBP20.24■□□□□ 0.83
HMG20B-212ENST00000487894 TNPO2O14787 897 aaKnown RBP20.24■□□□□ 0.83
HMG20B-212ENST00000487894 WDR46O15213 610 aaKnown RBP20.24■□□□□ 0.83
HMG20B-212ENST00000487894 CNMDO75829 334 aa20.24■□□□□ 0.83
HMG20B-212ENST00000487894 HOXD10P28358 340 aa20.24■□□□□ 0.83
HMG20B-212ENST00000487894 ERVK-9P63128 1117 aa20.24■□□□□ 0.83
HMG20B-212ENST00000487894 ERVK-24P63145 666 aa20.24■□□□□ 0.83
HMG20B-212ENST00000487894 SKAP1Q86WV1 359 aa20.24■□□□□ 0.83
HMG20B-212ENST00000487894 ARMC5Q96C12 935 aa20.24■□□□□ 0.83
HMG20B-212ENST00000487894 CEP95Q96GE4 821 aa20.24■□□□□ 0.83
HMG20B-212ENST00000487894 PAGR1Q9BTK6 254 aa20.24■□□□□ 0.83
HMG20B-212ENST00000487894 TANGO6Q9C0B7 1094 aa20.24■□□□□ 0.83
HMG20B-212ENST00000487894 NBPF3Q9H094 633 aa20.24■□□□□ 0.83
HMG20B-212ENST00000487894 ZNF236Q9UL36 1845 aa20.23■□□□□ 0.83
HMG20B-212ENST00000487894 ORC4O43929 436 aa20.23■□□□□ 0.83
HMG20B-212ENST00000487894 FGRP09769 529 aa20.23■□□□□ 0.83
HMG20B-212ENST00000487894 TSPY3P0CV98 308 aa20.23■□□□□ 0.83
HMG20B-212ENST00000487894 TSPY8P0CW00 308 aa20.23■□□□□ 0.83
HMG20B-212ENST00000487894 HAND2P61296 217 aa20.23■□□□□ 0.83
HMG20B-212ENST00000487894 TFAP4Q01664 338 aa20.23■□□□□ 0.83
HMG20B-212ENST00000487894 GPRC5AQ8NFJ5 357 aa20.23■□□□□ 0.83
HMG20B-212ENST00000487894 GOPCQ9HD26 462 aa20.23■□□□□ 0.83
HMG20B-212ENST00000487894 MTMR4Q9NYA4 1195 aa20.23■□□□□ 0.83
HMG20B-212ENST00000487894 RAD50Q92878 1312 aa20.23■□□□□ 0.83
HMG20B-212ENST00000487894 CHMLP26374 656 aa20.22■□□□□ 0.83
HMG20B-212ENST00000487894 SOX10P56693 466 aa20.22■□□□□ 0.83
HMG20B-212ENST00000487894 Q3C1V9 767 aa20.22■□□□□ 0.83
HMG20B-212ENST00000487894 SLC9C1Q4G0N8 1177 aa20.22■□□□□ 0.83
HMG20B-212ENST00000487894 DSCC1Q9BVC3 393 aa20.22■□□□□ 0.83
HMG20B-212ENST00000487894 RABGAP1Q9Y3P9 1069 aa20.22■□□□□ 0.83
HMG20B-212ENST00000487894 COG2Q14746 738 aa20.21■□□□□ 0.83
HMG20B-212ENST00000487894 TBC1D10CQ8IV04 446 aa20.21■□□□□ 0.83
HMG20B-212ENST00000487894 RAET1EQ8TD07 263 aa20.21■□□□□ 0.83
HMG20B-212ENST00000487894 SH3TC2Q8TF17 1288 aa20.21■□□□□ 0.83
HMG20B-212ENST00000487894 MKL1Q969V6 931 aa20.21■□□□□ 0.83
HMG20B-212ENST00000487894 ZNF333Q96JL9 665 aa20.21■□□□□ 0.83
HMG20B-212ENST00000487894 BTBD7Q9P203 1132 aa20.21■□□□□ 0.83
HMG20B-212ENST00000487894 CLIP2Q9UDT6 1046 aa20.21■□□□□ 0.83
HMG20B-212ENST00000487894 ZNFX1Q9P2E3 1918 aaKnown RBP20.21■□□□□ 0.83
HMG20B-212ENST00000487894 TNRC18O15417 2968 aaPredicted RBP20.21■□□□□ 0.83
HMG20B-212ENST00000487894 TSPY2A6NKD2 308 aa20.2■□□□□ 0.82
HMG20B-212ENST00000487894 TTLL1O95922 423 aa20.2■□□□□ 0.82
HMG20B-212ENST00000487894 NEFLP07196 543 aa20.2■□□□□ 0.82
HMG20B-212ENST00000487894 FLT3LGP49771 235 aa20.2■□□□□ 0.82
HMG20B-212ENST00000487894 COA7Q96BR5 231 aa20.2■□□□□ 0.82
HMG20B-212ENST00000487894 CCDC136Q96JN2 1154 aa20.2■□□□□ 0.82
HMG20B-212ENST00000487894 PORCNQ9H237 461 aa20.2■□□□□ 0.82
HMG20B-212ENST00000487894 KIAA0100Q14667 2235 aaKnown RBP20.19■□□□□ 0.82
HMG20B-212ENST00000487894 F5H6K3 240 aa20.19■□□□□ 0.82
HMG20B-212ENST00000487894 RAD21O60216 631 aa20.19■□□□□ 0.82
HMG20B-212ENST00000487894 RANBP6O60518 1105 aaKnown RBP20.19■□□□□ 0.82
HMG20B-212ENST00000487894 FLOT1O75955 427 aa20.19■□□□□ 0.82
HMG20B-212ENST00000487894 NDUFB10O96000 172 aa20.19■□□□□ 0.82
HMG20B-212ENST00000487894 DSG3P32926 999 aa20.19■□□□□ 0.82
HMG20B-212ENST00000487894 KLRC3Q07444 240 aa20.19■□□□□ 0.82
HMG20B-212ENST00000487894 FAM83BQ5T0W9 1011 aa20.19■□□□□ 0.82
HMG20B-212ENST00000487894 LRRC47Q8N1G4 583 aaKnown RBP20.19■□□□□ 0.82
HMG20B-212ENST00000487894 STAG1Q8WVM7 1258 aa20.19■□□□□ 0.82
HMG20B-212ENST00000487894 IL17RBQ9NRM6 502 aa20.19■□□□□ 0.82
HMG20B-212ENST00000487894 SYNPO2Q9UMS6 1093 aa20.19■□□□□ 0.82
HMG20B-212ENST00000487894 NMT2O60551 498 aa20.18■□□□□ 0.82
HMG20B-212ENST00000487894 MAPK4P31152 587 aa20.18■□□□□ 0.82
HMG20B-212ENST00000487894 GRK4P32298 578 aa20.18■□□□□ 0.82
HMG20B-212ENST00000487894 IRF5Q13568 498 aa20.18■□□□□ 0.82
HMG20B-212ENST00000487894 RRP12Q5JTH9 1297 aaKnown RBP20.18■□□□□ 0.82
HMG20B-212ENST00000487894 AKNAD1Q5T1N1 836 aa20.18■□□□□ 0.82
HMG20B-212ENST00000487894 RUFY2Q8WXA3 655 aa20.18■□□□□ 0.82
HMG20B-212ENST00000487894 ATG4CQ96DT6 458 aa20.18■□□□□ 0.82
HMG20B-212ENST00000487894 NUP88Q99567 741 aaPredicted RBP20.18■□□□□ 0.82
HMG20B-212ENST00000487894 TOMM22Q9NS69 142 aa20.18■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms