RNA–Protein interactions for RNA: ENST00000487188.1

VPS13D-209, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 2

Gene VPS13D, Length 3,990 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-209ENST00000487188 PSMB7Q99436 277 aa6.98□□□□□ -1.29
VPS13D-209ENST00000487188 VCPKMTQ9H867 229 aa6.98□□□□□ -1.29
VPS13D-209ENST00000487188 LGR6Q9HBX8 967 aa6.98□□□□□ -1.29
VPS13D-209ENST00000487188 ADAMTS13Q76LX8 1427 aa6.98□□□□□ -1.29
VPS13D-209ENST00000487188 PLEKHG1Q9ULL1 1385 aa6.98□□□□□ -1.29
VPS13D-209ENST00000487188 C21orf2O43822 256 aa6.98□□□□□ -1.29
VPS13D-209ENST00000487188 TRIM21P19474 475 aaKnown RBP6.98□□□□□ -1.29
VPS13D-209ENST00000487188 BMP6P22004 513 aa6.98□□□□□ -1.29
VPS13D-209ENST00000487188 COPB1P53618 953 aaKnown RBP6.98□□□□□ -1.29
VPS13D-209ENST00000487188 SMTNP53814 917 aa6.98□□□□□ -1.29
VPS13D-209ENST00000487188 SLC7A5Q01650 507 aa6.98□□□□□ -1.29
VPS13D-209ENST00000487188 GUCY1A3Q02108 690 aa6.98□□□□□ -1.29
VPS13D-209ENST00000487188 ZMYM1Q5SVZ6 1142 aa6.98□□□□□ -1.29
VPS13D-209ENST00000487188 NAA35Q5VZE5 725 aa6.98□□□□□ -1.29
VPS13D-209ENST00000487188 TBC1D31Q96DN5 1066 aa6.98□□□□□ -1.29
VPS13D-209ENST00000487188 RRP36Q96EU6 259 aaKnown RBP6.98□□□□□ -1.29
VPS13D-209ENST00000487188 ADD3Q9UEY8 706 aaKnown RBP6.98□□□□□ -1.29
VPS13D-209ENST00000487188 PPP1R12BO60237 982 aaPredicted RBP6.98□□□□□ -1.29
VPS13D-209ENST00000487188 ABL1P00519 1130 aa6.98□□□□□ -1.29
VPS13D-209ENST00000487188 SSR1P43307 286 aaKnown RBP6.98□□□□□ -1.29
VPS13D-209ENST00000487188 HLTFQ14527 1009 aaKnown RBP eCLIP6.98□□□□□ -1.29
VPS13D-209ENST00000487188 TTF1Q15361 905 aaPredicted RBP6.98□□□□□ -1.29
VPS13D-209ENST00000487188 EMBQ6PCB8 327 aa6.98□□□□□ -1.29
VPS13D-209ENST00000487188 NLRP14Q86W24 1093 aa6.98□□□□□ -1.29
VPS13D-209ENST00000487188 DIS3L2Q8IYB7 885 aaKnown RBP6.98□□□□□ -1.29
VPS13D-209ENST00000487188 ARL8AQ96BM9 186 aa6.98□□□□□ -1.29
VPS13D-209ENST00000487188 AGXT2Q9BYV1 514 aa6.98□□□□□ -1.29
VPS13D-209ENST00000487188 PSMD14O00487 310 aa6.97□□□□□ -1.29
VPS13D-209ENST00000487188 MYBL2P10244 700 aa6.97□□□□□ -1.29
VPS13D-209ENST00000487188 LSP1P33241 339 aa6.97□□□□□ -1.29
VPS13D-209ENST00000487188 AMPD2Q01433 879 aa6.97□□□□□ -1.29
VPS13D-209ENST00000487188 KRT31Q15323 416 aa6.97□□□□□ -1.29
VPS13D-209ENST00000487188 UBAC1Q9BSL1 405 aa6.97□□□□□ -1.29
VPS13D-209ENST00000487188 NBPF3Q9H094 633 aa6.97□□□□□ -1.29
VPS13D-209ENST00000487188 EPN3Q9H201 632 aa6.97□□□□□ -1.29
VPS13D-209ENST00000487188 CPSF2Q9P2I0 782 aaKnown RBP6.97□□□□□ -1.29
VPS13D-209ENST00000487188 ANGEL1Q9UNK9 670 aaKnown RBP6.97□□□□□ -1.29
VPS13D-209ENST00000487188 MYH15Q9Y2K3 1946 aa6.97□□□□□ -1.29
VPS13D-209ENST00000487188 KCNJ18B7U540 433 aa6.97□□□□□ -1.29
VPS13D-209ENST00000487188 ZNF185O15231 689 aa6.97□□□□□ -1.29
VPS13D-209ENST00000487188 PPP1R37O75864 691 aa6.97□□□□□ -1.29
VPS13D-209ENST00000487188 APBA1Q02410 837 aa6.97□□□□□ -1.29
VPS13D-209ENST00000487188 MAP2K1Q02750 393 aaPredicted RBP6.97□□□□□ -1.29
VPS13D-209ENST00000487188 PAK2Q13177 524 aa6.97□□□□□ -1.29
VPS13D-209ENST00000487188 KCNJ12Q14500 433 aa6.97□□□□□ -1.29
VPS13D-209ENST00000487188 PTPAQ15257 358 aa6.97□□□□□ -1.29
VPS13D-209ENST00000487188 RILPL1Q5EBL4 403 aa6.97□□□□□ -1.29
VPS13D-209ENST00000487188 TMEM67Q5HYA8 995 aa6.97□□□□□ -1.29
VPS13D-209ENST00000487188 NOSTRINQ8IVI9 506 aa6.97□□□□□ -1.29
VPS13D-209ENST00000487188 KIRREL3Q8IZU9 778 aa6.97□□□□□ -1.29
VPS13D-209ENST00000487188 TBC1D22AQ8WUA7 517 aa6.97□□□□□ -1.29
VPS13D-209ENST00000487188 CHP1Q99653 195 aa6.97□□□□□ -1.29
VPS13D-209ENST00000487188 OVOS2A0A0J9YW53 1432 aa6.97□□□□□ -1.29
VPS13D-209ENST00000487188 OVOS2Q6IE36 1432 aa6.97□□□□□ -1.29
VPS13D-209ENST00000487188 CRYBG1Q9Y4K1 1723 aa6.97□□□□□ -1.29
VPS13D-209ENST00000487188 PDHBP11177 359 aa6.97□□□□□ -1.29
VPS13D-209ENST00000487188 HOXC9P31274 260 aa6.97□□□□□ -1.29
VPS13D-209ENST00000487188 GUCY2FP51841 1108 aa6.97□□□□□ -1.29
VPS13D-209ENST00000487188 HDLBPQ00341 1268 aaKnown RBP6.97□□□□□ -1.29
VPS13D-209ENST00000487188 IFFO1Q0D2I5 559 aa6.97□□□□□ -1.29
VPS13D-209ENST00000487188 PAK1Q13153 545 aa6.97□□□□□ -1.29
VPS13D-209ENST00000487188 PLCB4Q15147 1175 aa6.97□□□□□ -1.29
VPS13D-209ENST00000487188 CPLX4Q7Z7G2 160 aa6.97□□□□□ -1.29
VPS13D-209ENST00000487188 EGFL6Q8IUX8 553 aa6.97□□□□□ -1.29
VPS13D-209ENST00000487188 IFT20Q8IY31 132 aa6.97□□□□□ -1.29
VPS13D-209ENST00000487188 CACNA2D3Q8IZS8 1091 aa6.97□□□□□ -1.29
VPS13D-209ENST00000487188 MICAL1Q8TDZ2 1067 aa6.97□□□□□ -1.29
VPS13D-209ENST00000487188 STAMQ92783 540 aa6.97□□□□□ -1.29
VPS13D-209ENST00000487188 HAUS2Q9NVX0 235 aa6.97□□□□□ -1.29
VPS13D-209ENST00000487188 SLC12A7Q9Y666 1083 aa6.97□□□□□ -1.29
VPS13D-209ENST00000487188 GRIN2DO15399 1336 aa6.97□□□□□ -1.29
VPS13D-209ENST00000487188 BTBD18B2RXH4 712 aa6.96□□□□□ -1.29
VPS13D-209ENST00000487188 AGPSO00116 658 aa6.96□□□□□ -1.29
VPS13D-209ENST00000487188 SEMA3EO15041 775 aa6.96□□□□□ -1.29
VPS13D-209ENST00000487188 XBP1P17861 261 aa6.96□□□□□ -1.29
VPS13D-209ENST00000487188 RRP12Q5JTH9 1297 aaKnown RBP6.96□□□□□ -1.29
VPS13D-209ENST00000487188 FNBP4Q8N3X1 1017 aaPredicted RBP6.96□□□□□ -1.29
VPS13D-209ENST00000487188 ARMC2Q8NEN0 867 aa6.96□□□□□ -1.29
VPS13D-209ENST00000487188 CCT8L2Q96SF2 557 aa6.96□□□□□ -1.29
VPS13D-209ENST00000487188 MYL10Q9BUA6 226 aa6.96□□□□□ -1.29
VPS13D-209ENST00000487188 TSGA10Q9BZW7 698 aa6.96□□□□□ -1.29
VPS13D-209ENST00000487188 COPRSQ9NQ92 184 aa6.96□□□□□ -1.29
VPS13D-209ENST00000487188 KCNJ14Q9UNX9 436 aa6.96□□□□□ -1.29
VPS13D-209ENST00000487188 ITIH6Q6UXX5 1313 aa6.96□□□□□ -1.29
VPS13D-209ENST00000487188 ATXN2Q99700 1313 aaKnown RBP6.96□□□□□ -1.29
VPS13D-209ENST00000487188 A0A087WZG4 1122 aa6.96□□□□□ -1.3
VPS13D-209ENST00000487188 ERICH2A1L162 156 aa6.96□□□□□ -1.3
VPS13D-209ENST00000487188 M0R2C6 588 aa6.96□□□□□ -1.3
VPS13D-209ENST00000487188 CASP1P29466 404 aa6.96□□□□□ -1.3
VPS13D-209ENST00000487188 SEC24CP53992 1094 aa6.96□□□□□ -1.3
VPS13D-209ENST00000487188 TIMM10P62072 90 aa6.96□□□□□ -1.3
VPS13D-209ENST00000487188 DRP2Q13474 957 aa6.96□□□□□ -1.3
VPS13D-209ENST00000487188 CYB5D1Q6P9G0 228 aa6.96□□□□□ -1.3
VPS13D-209ENST00000487188 XAGE3Q8WTP9 111 aa6.96□□□□□ -1.3
VPS13D-209ENST00000487188 NUP133Q8WUM0 1156 aa6.96□□□□□ -1.3
VPS13D-209ENST00000487188 TRIM47Q96LD4 638 aa6.96□□□□□ -1.3
VPS13D-209ENST00000487188 RNPC3Q96LT9 517 aaKnown RBP6.96□□□□□ -1.3
VPS13D-209ENST00000487188 CCDC42Q96M95 316 aa6.96□□□□□ -1.3
VPS13D-209ENST00000487188 STIM2Q9P246 746 aa6.96□□□□□ -1.3
VPS13D-209ENST00000487188 TFR2Q9UP52 801 aa6.96□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms