RNA–Protein interactions for RNA: ENST00000480698.1

TMEM40-207, Transcript of transmembrane protein 40, humanhuman

TSL 2

Gene TMEM40, Length 507 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM40-207ENST00000480698 USP17L17D6RBQ6 530 aa11.71□□□□□ -0.53
TMEM40-207ENST00000480698 USP17L19D6RCP7 530 aa11.71□□□□□ -0.53
TMEM40-207ENST00000480698 USP17L20D6RJB6 530 aa11.71□□□□□ -0.53
TMEM40-207ENST00000480698 STRNO43815 780 aa11.71□□□□□ -0.53
TMEM40-207ENST00000480698 CSF2RAP15509 400 aa11.71□□□□□ -0.53
TMEM40-207ENST00000480698 CDK7P50613 346 aa11.71□□□□□ -0.53
TMEM40-207ENST00000480698 MECOMQ03112 1051 aa11.71□□□□□ -0.53
TMEM40-207ENST00000480698 USP17L24Q0WX57 530 aa11.71□□□□□ -0.53
TMEM40-207ENST00000480698 CCDC174Q6PII3 467 aa11.71□□□□□ -0.53
TMEM40-207ENST00000480698 ZNF365Q70YC5 407 aa11.71□□□□□ -0.53
TMEM40-207ENST00000480698 DZIP1Q86YF9 867 aaKnown RBP11.71□□□□□ -0.53
TMEM40-207ENST00000480698 WWC1Q8IX03 1113 aa11.71□□□□□ -0.53
TMEM40-207ENST00000480698 TSEN34Q9BSV6 310 aaKnown RBP11.71□□□□□ -0.53
TMEM40-207ENST00000480698 SLC28A3Q9HAS3 691 aa11.71□□□□□ -0.53
TMEM40-207ENST00000480698 XPNPEP3Q9NQH7 507 aa11.71□□□□□ -0.53
TMEM40-207ENST00000480698 GNL3LQ9NVN8 582 aaKnown RBP11.71□□□□□ -0.53
TMEM40-207ENST00000480698 PI4KBQ9UBF8 816 aa11.71□□□□□ -0.53
TMEM40-207ENST00000480698 MSRAQ9UJ68 235 aa11.71□□□□□ -0.53
TMEM40-207ENST00000480698 IVNS1ABPQ9Y6Y0 642 aa11.71□□□□□ -0.53
TMEM40-207ENST00000480698 TRIOO75962 3097 aa11.71□□□□□ -0.54
TMEM40-207ENST00000480698 ATP2B3Q16720 1220 aa11.7□□□□□ -0.54
TMEM40-207ENST00000480698 NCBP3Q53F19 620 aaKnown RBP11.7□□□□□ -0.54
TMEM40-207ENST00000480698 PRAMEF19Q5SWL8 479 aa11.7□□□□□ -0.54
TMEM40-207ENST00000480698 CCDC102BQ68D86 513 aa11.7□□□□□ -0.54
TMEM40-207ENST00000480698 ABRAQ8N0Z2 381 aa11.7□□□□□ -0.54
TMEM40-207ENST00000480698 SHCBP1Q8NEM2 672 aa11.7□□□□□ -0.54
TMEM40-207ENST00000480698 NSUN4Q96CB9 384 aaKnown RBP11.7□□□□□ -0.54
TMEM40-207ENST00000480698 MAML3Q96JK9 1138 aa11.7□□□□□ -0.54
TMEM40-207ENST00000480698 FBXL18Q96ME1 805 aa11.7□□□□□ -0.54
TMEM40-207ENST00000480698 DHX36Q9H2U1 1008 aaKnown RBP11.7□□□□□ -0.54
TMEM40-207ENST00000480698 FBXO3Q9UK99 471 aa11.7□□□□□ -0.54
TMEM40-207ENST00000480698 DMDP11532 3685 aa11.7□□□□□ -0.54
TMEM40-207ENST00000480698 DCDC2CA8MYV0 355 aa11.69□□□□□ -0.54
TMEM40-207ENST00000480698 VCAM1P19320 739 aa11.69□□□□□ -0.54
TMEM40-207ENST00000480698 RNF180Q86T96 592 aa11.69□□□□□ -0.54
TMEM40-207ENST00000480698 KLHDC9Q8NEP7 349 aa11.69□□□□□ -0.54
TMEM40-207ENST00000480698 VWCEQ96DN2 955 aa11.69□□□□□ -0.54
TMEM40-207ENST00000480698 MOV10L1Q9BXT6 1211 aaKnown RBP11.69□□□□□ -0.54
TMEM40-207ENST00000480698 CWC22Q9HCG8 908 aaKnown RBP11.69□□□□□ -0.54
TMEM40-207ENST00000480698 ZDBF2Q9HCK1 2354 aa11.69□□□□□ -0.54
TMEM40-207ENST00000480698 MOXD2PA6NHM9 499 aa11.68□□□□□ -0.54
TMEM40-207ENST00000480698 CIAO1O76071 339 aa11.68□□□□□ -0.54
TMEM40-207ENST00000480698 GDF11O95390 407 aa11.68□□□□□ -0.54
TMEM40-207ENST00000480698 PGK1P00558 417 aa11.68□□□□□ -0.54
TMEM40-207ENST00000480698 ZNF865P0CJ78 1059 aaPredicted RBP11.68□□□□□ -0.54
TMEM40-207ENST00000480698 ACRP10323 421 aa11.68□□□□□ -0.54
TMEM40-207ENST00000480698 RARBP10826 455 aa11.68□□□□□ -0.54
TMEM40-207ENST00000480698 ACLYP53396 1101 aa11.68□□□□□ -0.54
TMEM40-207ENST00000480698 WDR78Q5VTH9 848 aa11.68□□□□□ -0.54
TMEM40-207ENST00000480698 DPP9Q86TI2 863 aa11.68□□□□□ -0.54
TMEM40-207ENST00000480698 KIAA1683Q9H0B3 1180 aa11.68□□□□□ -0.54
TMEM40-207ENST00000480698 IL23AQ9NPF7 189 aa11.68□□□□□ -0.54
TMEM40-207ENST00000480698 STARD7Q9NQZ5 370 aa11.68□□□□□ -0.54
TMEM40-207ENST00000480698 MROH7Q68CQ1 1323 aa11.67□□□□□ -0.54
TMEM40-207ENST00000480698 CENPBP07199 599 aaPredicted RBP11.67□□□□□ -0.54
TMEM40-207ENST00000480698 CST5P28325 142 aaPredicted RBP11.67□□□□□ -0.54
TMEM40-207ENST00000480698 ADORA1P30542 326 aa11.67□□□□□ -0.54
TMEM40-207ENST00000480698 FOXK2Q01167 660 aa11.67□□□□□ -0.54
TMEM40-207ENST00000480698 PPP2R2DQ66LE6 453 aa11.67□□□□□ -0.54
TMEM40-207ENST00000480698 SPTY2D1Q68D10 685 aaPredicted RBP11.67□□□□□ -0.54
TMEM40-207ENST00000480698 FOXP4Q8IVH2 680 aaPredicted RBP11.67□□□□□ -0.54
TMEM40-207ENST00000480698 FAM126BQ8IXS8 530 aa11.67□□□□□ -0.54
TMEM40-207ENST00000480698 TMEM199Q8N511 208 aa11.67□□□□□ -0.54
TMEM40-207ENST00000480698 ABCF2Q9UG63 623 aa11.67□□□□□ -0.54
TMEM40-207ENST00000480698 PCDHA11Q9Y5I1 949 aa11.67□□□□□ -0.54
TMEM40-207ENST00000480698 PARP14Q460N5 1801 aa11.67□□□□□ -0.54
TMEM40-207ENST00000480698 ELP1O95163 1332 aa11.66□□□□□ -0.54
TMEM40-207ENST00000480698 SYNRGQ9UMZ2 1314 aa11.66□□□□□ -0.54
TMEM40-207ENST00000480698 COL4A4P53420 1690 aaPredicted RBP11.66□□□□□ -0.54
TMEM40-207ENST00000480698 EPOPA6NHQ4 379 aa11.66□□□□□ -0.54
TMEM40-207ENST00000480698 CD4P01730 458 aa11.66□□□□□ -0.54
TMEM40-207ENST00000480698 MYCNP04198 464 aaPredicted RBP11.66□□□□□ -0.54
TMEM40-207ENST00000480698 TATDN1Q6P1N9 297 aa11.66□□□□□ -0.54
TMEM40-207ENST00000480698 FAM9BQ8IZU0 186 aa11.66□□□□□ -0.54
TMEM40-207ENST00000480698 MICALL1Q8N3F8 863 aa11.66□□□□□ -0.54
TMEM40-207ENST00000480698 NUP133Q8WUM0 1156 aa11.66□□□□□ -0.54
TMEM40-207ENST00000480698 HLA-CQ95604 372 aa11.66□□□□□ -0.54
TMEM40-207ENST00000480698 SPATC1LQ9H0A9 340 aa11.66□□□□□ -0.54
TMEM40-207ENST00000480698 FLT1P17948 1338 aa11.65□□□□□ -0.54
TMEM40-207ENST00000480698 ZFHX4Q86UP3 3567 aa11.65□□□□□ -0.54
TMEM40-207ENST00000480698 AKR1A1P14550 325 aa11.65□□□□□ -0.54
TMEM40-207ENST00000480698 MYOGP15173 224 aa11.65□□□□□ -0.54
TMEM40-207ENST00000480698 ERCC3P19447 782 aa11.65□□□□□ -0.54
TMEM40-207ENST00000480698 RABGGTBP53611 331 aa11.65□□□□□ -0.54
TMEM40-207ENST00000480698 USP14P54578 494 aa11.65□□□□□ -0.54
TMEM40-207ENST00000480698 SLC4A10Q6U841 1118 aa11.65□□□□□ -0.54
TMEM40-207ENST00000480698 ERICH6Q7L0X2 663 aa11.65□□□□□ -0.54
TMEM40-207ENST00000480698 FAM178BQ8IXR5 827 aa11.65□□□□□ -0.54
TMEM40-207ENST00000480698 TEX11Q8IYF3 940 aa11.65□□□□□ -0.54
TMEM40-207ENST00000480698 LENG1Q96BZ8 264 aaPredicted RBP11.65□□□□□ -0.54
TMEM40-207ENST00000480698 USP44Q9H0E7 712 aa11.65□□□□□ -0.54
TMEM40-207ENST00000480698 ZNFX1Q9P2E3 1918 aaKnown RBP11.64□□□□□ -0.55
TMEM40-207ENST00000480698 SPTBN4Q9H254 2564 aa11.64□□□□□ -0.55
TMEM40-207ENST00000480698 POTEB3A0JP26 581 aa11.64□□□□□ -0.55
TMEM40-207ENST00000480698 RFXAPO00287 272 aa11.64□□□□□ -0.55
TMEM40-207ENST00000480698 ST18O60284 1047 aa11.64□□□□□ -0.55
TMEM40-207ENST00000480698 LPXNO60711 386 aa11.64□□□□□ -0.55
TMEM40-207ENST00000480698 GH2P01242 217 aa11.64□□□□□ -0.55
TMEM40-207ENST00000480698 TAL1P17542 331 aaPredicted RBP11.64□□□□□ -0.55
TMEM40-207ENST00000480698 EXOSC9Q06265 439 aaKnown RBP11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms