RNA–Protein interactions for RNA: ENST00000480615.1

SNRNP200-204, Transcript of small nuclear ribonucleoprotein U5 subunit 200, humanhuman

TSL 5

Gene SNRNP200, Length 1,646 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP200-204ENST00000480615 GOPCQ9HD26 462 aa15.85■□□□□ 0.13
SNRNP200-204ENST00000480615 TSKSQ9UJT2 592 aa15.85■□□□□ 0.13
SNRNP200-204ENST00000480615 TMX2Q9Y320 296 aa15.85■□□□□ 0.13
SNRNP200-204ENST00000480615 TESPA1A2RU30 521 aaPredicted RBP15.84■□□□□ 0.13
SNRNP200-204ENST00000480615 PDHXO00330 501 aa15.84■□□□□ 0.13
SNRNP200-204ENST00000480615 IFIT3O14879 490 aaKnown RBP15.84■□□□□ 0.13
SNRNP200-204ENST00000480615 PRC1O43663 620 aa15.84■□□□□ 0.13
SNRNP200-204ENST00000480615 VCAM1P19320 739 aa15.84■□□□□ 0.13
SNRNP200-204ENST00000480615 ANTXR2P58335 489 aa15.84■□□□□ 0.13
SNRNP200-204ENST00000480615 RCSD1Q6JBY9 416 aa15.84■□□□□ 0.13
SNRNP200-204ENST00000480615 GPAT2Q6NUI2 795 aa15.84■□□□□ 0.13
SNRNP200-204ENST00000480615 PROCA1Q8NCQ7 364 aaPredicted RBP15.84■□□□□ 0.13
SNRNP200-204ENST00000480615 BEGAINQ9BUH8 593 aa15.84■□□□□ 0.13
SNRNP200-204ENST00000480615 EIF5BO60841 1220 aaKnown RBP15.83■□□□□ 0.13
SNRNP200-204ENST00000480615 MCM5P33992 734 aa15.83■□□□□ 0.13
SNRNP200-204ENST00000480615 MAP2K1Q02750 393 aaPredicted RBP15.83■□□□□ 0.13
SNRNP200-204ENST00000480615 KRT32Q14532 448 aa15.83■□□□□ 0.13
SNRNP200-204ENST00000480615 SH3D19Q5HYK7 790 aa15.83■□□□□ 0.13
SNRNP200-204ENST00000480615 OTUD7BQ6GQQ9 843 aa15.83■□□□□ 0.13
SNRNP200-204ENST00000480615 TMEM47Q9BQJ4 181 aa15.83■□□□□ 0.13
SNRNP200-204ENST00000480615 TANGO6Q9C0B7 1094 aa15.83■□□□□ 0.13
SNRNP200-204ENST00000480615 RPAP3Q9H6T3 665 aaPredicted RBP15.83■□□□□ 0.13
SNRNP200-204ENST00000480615 VCPKMTQ9H867 229 aa15.83■□□□□ 0.13
SNRNP200-204ENST00000480615 GPHNQ9NQX3 736 aaPredicted RBP15.83■□□□□ 0.13
SNRNP200-204ENST00000480615 TCP11L1Q9NUJ3 509 aa15.83■□□□□ 0.13
SNRNP200-204ENST00000480615 AGTPBP1Q9UPW5 1226 aa15.83■□□□□ 0.13
SNRNP200-204ENST00000480615 ERICH2A1L162 156 aa15.83■□□□□ 0.12
SNRNP200-204ENST00000480615 F5H6K3 240 aa15.83■□□□□ 0.12
SNRNP200-204ENST00000480615 TBC1D8O95759 1140 aa15.83■□□□□ 0.12
SNRNP200-204ENST00000480615 NDUFB10O96000 172 aa15.83■□□□□ 0.12
SNRNP200-204ENST00000480615 CYP2C8P10632 490 aa15.83■□□□□ 0.12
SNRNP200-204ENST00000480615 CASTP20810 708 aaKnown RBP15.83■□□□□ 0.12
SNRNP200-204ENST00000480615 KLRC3Q07444 240 aa15.83■□□□□ 0.12
SNRNP200-204ENST00000480615 TAF1CQ15572 869 aaPredicted RBP15.83■□□□□ 0.12
SNRNP200-204ENST00000480615 TMEM67Q5HYA8 995 aa15.83■□□□□ 0.12
SNRNP200-204ENST00000480615 IFIT1BQ5T764 474 aaKnown RBP15.83■□□□□ 0.12
SNRNP200-204ENST00000480615 REM2Q8IYK8 340 aaPredicted RBP15.83■□□□□ 0.12
SNRNP200-204ENST00000480615 KCNB2Q92953 911 aa15.83■□□□□ 0.12
SNRNP200-204ENST00000480615 UPF2Q9HAU5 1272 aaKnown RBP15.83■□□□□ 0.12
SNRNP200-204ENST00000480615 SENP2Q9HC62 589 aa15.83■□□□□ 0.12
SNRNP200-204ENST00000480615 RNF186Q9NXI6 227 aa15.83■□□□□ 0.12
SNRNP200-204ENST00000480615 EPB41L2O43491 1005 aaKnown RBP15.82■□□□□ 0.12
SNRNP200-204ENST00000480615 TOP1P11387 765 aaKnown RBP15.82■□□□□ 0.12
SNRNP200-204ENST00000480615 SART3Q15020 963 aaKnown RBP15.82■□□□□ 0.12
SNRNP200-204ENST00000480615 TSGA10IPQ3SY00 556 aa15.82■□□□□ 0.12
SNRNP200-204ENST00000480615 PPP4R3BQ5MIZ7 849 aa15.82■□□□□ 0.12
SNRNP200-204ENST00000480615 FAM83BQ5T0W9 1011 aa15.82■□□□□ 0.12
SNRNP200-204ENST00000480615 ANKRD23Q86SG2 305 aa15.82■□□□□ 0.12
SNRNP200-204ENST00000480615 MKL1Q969V6 931 aa15.82■□□□□ 0.12
SNRNP200-204ENST00000480615 KAT14Q9H8E8 782 aa15.82■□□□□ 0.12
SNRNP200-204ENST00000480615 CRHR2Q13324 411 aa15.81■□□□□ 0.12
SNRNP200-204ENST00000480615 WTAPQ15007 396 aa15.81■□□□□ 0.12
SNRNP200-204ENST00000480615 SLFN13Q68D06 897 aa15.81■□□□□ 0.12
SNRNP200-204ENST00000480615 JMYQ8N9B5 988 aa15.81■□□□□ 0.12
SNRNP200-204ENST00000480615 UPF3BQ9BZI7 483 aaKnown RBP15.81■□□□□ 0.12
SNRNP200-204ENST00000480615 R3HDMLQ9H3Y0 253 aa15.81■□□□□ 0.12
SNRNP200-204ENST00000480615 WBP1LQ9NX94 342 aa15.81■□□□□ 0.12
SNRNP200-204ENST00000480615 IRX3P78415 501 aaPredicted RBP15.8■□□□□ 0.12
SNRNP200-204ENST00000480615 FGD1P98174 961 aa15.8■□□□□ 0.12
SNRNP200-204ENST00000480615 SEC23AQ15436 765 aa15.8■□□□□ 0.12
SNRNP200-204ENST00000480615 CCDC178Q5BJE1 867 aa15.8■□□□□ 0.12
SNRNP200-204ENST00000480615 BLOC1S2Q6QNY1 142 aa15.8■□□□□ 0.12
SNRNP200-204ENST00000480615 DGKHQ86XP1 1220 aa15.8■□□□□ 0.12
SNRNP200-204ENST00000480615 PNMA1Q8ND90 353 aa15.8■□□□□ 0.12
SNRNP200-204ENST00000480615 SMCR8Q8TEV9 937 aaPredicted RBP15.8■□□□□ 0.12
SNRNP200-204ENST00000480615 LPAR1Q92633 364 aa15.8■□□□□ 0.12
SNRNP200-204ENST00000480615 C12orf42Q96LP6 360 aa15.8■□□□□ 0.12
SNRNP200-204ENST00000480615 TTC14Q96N46 770 aa15.8■□□□□ 0.12
SNRNP200-204ENST00000480615 ASCC2Q9H1I8 757 aaPredicted RBP15.8■□□□□ 0.12
SNRNP200-204ENST00000480615 FRMPD2Q68DX3 1309 aaPredicted RBP15.79■□□□□ 0.12
SNRNP200-204ENST00000480615 ECM2O94769 699 aaPredicted RBP15.79■□□□□ 0.12
SNRNP200-204ENST00000480615 ALDH1A1P00352 501 aa15.79■□□□□ 0.12
SNRNP200-204ENST00000480615 SLC1A4P43007 532 aa15.79■□□□□ 0.12
SNRNP200-204ENST00000480615 NOVP48745 357 aa15.79■□□□□ 0.12
SNRNP200-204ENST00000480615 NT5C2P49902 561 aa15.79■□□□□ 0.12
SNRNP200-204ENST00000480615 PABPC4Q13310 644 aaKnown RBP eCLIP15.79■□□□□ 0.12
SNRNP200-204ENST00000480615 CCDC96Q2M329 555 aa15.79■□□□□ 0.12
SNRNP200-204ENST00000480615 NFXL1Q6ZNB6 911 aa15.79■□□□□ 0.12
SNRNP200-204ENST00000480615 KCTD1Q719H9 257 aa15.79■□□□□ 0.12
SNRNP200-204ENST00000480615 DHX32Q7L7V1 743 aaKnown RBP15.79■□□□□ 0.12
SNRNP200-204ENST00000480615 GMCL1P1Q8NEA9 526 aa15.79■□□□□ 0.12
SNRNP200-204ENST00000480615 IGDCC4Q8TDY8 1250 aa15.79■□□□□ 0.12
SNRNP200-204ENST00000480615 FBXO28Q9NVF7 368 aa15.79■□□□□ 0.12
SNRNP200-204ENST00000480615 USP17L15C9J2P7 530 aa15.79■□□□□ 0.12
SNRNP200-204ENST00000480615 USP17L13C9JLJ4 530 aa15.79■□□□□ 0.12
SNRNP200-204ENST00000480615 USP17L11C9JVI0 530 aa15.79■□□□□ 0.12
SNRNP200-204ENST00000480615 USP17L18D6R9N7 530 aa15.79■□□□□ 0.12
SNRNP200-204ENST00000480615 USP17L22D6RA61 530 aa15.79■□□□□ 0.12
SNRNP200-204ENST00000480615 USP17L17D6RBQ6 530 aa15.79■□□□□ 0.12
SNRNP200-204ENST00000480615 USP17L19D6RCP7 530 aa15.79■□□□□ 0.12
SNRNP200-204ENST00000480615 USP17L20D6RJB6 530 aa15.79■□□□□ 0.12
SNRNP200-204ENST00000480615 WDR46O15213 610 aaKnown RBP15.79■□□□□ 0.12
SNRNP200-204ENST00000480615 PEX10O60683 326 aa15.79■□□□□ 0.12
SNRNP200-204ENST00000480615 FLOT1O75955 427 aa15.79■□□□□ 0.12
SNRNP200-204ENST00000480615 HMGB1P09429 215 aaKnown RBP15.79■□□□□ 0.12
SNRNP200-204ENST00000480615 HSPA1AP0DMV8 641 aaKnown RBP15.79■□□□□ 0.12
SNRNP200-204ENST00000480615 HSPA1BP0DMV9 641 aaKnown RBP15.79■□□□□ 0.12
SNRNP200-204ENST00000480615 OSBPP22059 807 aa15.79■□□□□ 0.12
SNRNP200-204ENST00000480615 PSMA5P28066 241 aa15.79■□□□□ 0.12
SNRNP200-204ENST00000480615 USP17L24Q0WX57 530 aa15.79■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms