RNA–Protein interactions for RNA: ENST00000480609.1

COL4A2-206, Transcript of collagen type IV alpha 2 chain, humanhuman

TSL 2

Gene COL4A2, Length 535 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A2-206ENST00000480609 PTPRAP18433 802 aa15.36■□□□□ 0.05
COL4A2-206ENST00000480609 CDC27P30260 824 aa15.36■□□□□ 0.05
COL4A2-206ENST00000480609 INPP5BP32019 993 aa15.36■□□□□ 0.05
COL4A2-206ENST00000480609 FUT2Q10981 343 aa15.36■□□□□ 0.05
COL4A2-206ENST00000480609 RTN1Q16799 776 aa15.36■□□□□ 0.05
COL4A2-206ENST00000480609 ASPRV1Q53RT3 343 aa15.36■□□□□ 0.05
COL4A2-206ENST00000480609 GPATCH4Q5T3I0 446 aaKnown RBP15.36■□□□□ 0.05
COL4A2-206ENST00000480609 PPP1R3FQ6ZSY5 799 aaPredicted RBP15.36■□□□□ 0.05
COL4A2-206ENST00000480609 CCDC83Q8IWF9 413 aa15.36■□□□□ 0.05
COL4A2-206ENST00000480609 ANKRD13AQ8IZ07 590 aa15.36■□□□□ 0.05
COL4A2-206ENST00000480609 FAM177A1Q8N128 213 aaPredicted RBP15.36■□□□□ 0.05
COL4A2-206ENST00000480609 NSUN7Q8NE18 718 aaKnown RBP15.36■□□□□ 0.05
COL4A2-206ENST00000480609 CTCFLQ8NI51 663 aaPredicted RBP15.36■□□□□ 0.05
COL4A2-206ENST00000480609 DCAF4Q8WV16 495 aa15.36■□□□□ 0.05
COL4A2-206ENST00000480609 KIAA1683Q9H0B3 1180 aa15.36■□□□□ 0.05
COL4A2-206ENST00000480609 RBM27Q9P2N5 1060 aaKnown RBP15.36■□□□□ 0.05
COL4A2-206ENST00000480609 CLIP2Q9UDT6 1046 aa15.36■□□□□ 0.05
COL4A2-206ENST00000480609 DAXXQ9UER7 740 aaPredicted RBP15.36■□□□□ 0.05
COL4A2-206ENST00000480609 ATAD5Q96QE3 1844 aa15.36■□□□□ 0.05
COL4A2-206ENST00000480609 A0A1W2PRG0 241 aa15.35■□□□□ 0.05
COL4A2-206ENST00000480609 PRAMEF18Q5VWM3 479 aa15.35■□□□□ 0.05
COL4A2-206ENST00000480609 MAP1SQ66K74 1059 aaPredicted RBP15.35■□□□□ 0.05
COL4A2-206ENST00000480609 TMTC3Q6ZXV5 915 aa15.35■□□□□ 0.05
COL4A2-206ENST00000480609 ARMC9Q7Z3E5 817 aa15.35■□□□□ 0.05
COL4A2-206ENST00000480609 MICU3Q86XE3 530 aa15.35■□□□□ 0.05
COL4A2-206ENST00000480609 LPAR1Q92633 364 aa15.35■□□□□ 0.05
COL4A2-206ENST00000480609 C12orf42Q96LP6 360 aa15.35■□□□□ 0.05
COL4A2-206ENST00000480609 LARP6Q9BRS8 491 aaKnown RBP15.35■□□□□ 0.05
COL4A2-206ENST00000480609 RNF26Q9BY78 433 aaPredicted RBP15.35■□□□□ 0.05
COL4A2-206ENST00000480609 AS3MTQ9HBK9 375 aa15.35■□□□□ 0.05
COL4A2-206ENST00000480609 MAD2L2Q9UI95 211 aa15.35■□□□□ 0.05
COL4A2-206ENST00000480609 MYH4Q9Y623 1939 aa15.35■□□□□ 0.05
COL4A2-206ENST00000480609 KIF3CO14782 793 aa15.34■□□□□ 0.05
COL4A2-206ENST00000480609 ZNF543Q08ER8 600 aa15.34■□□□□ 0.05
COL4A2-206ENST00000480609 RAB3GAP1Q15042 981 aa15.34■□□□□ 0.05
COL4A2-206ENST00000480609 SHROOM1Q2M3G4 852 aaPredicted RBP15.34■□□□□ 0.05
COL4A2-206ENST00000480609 SH3D19Q5HYK7 790 aa15.34■□□□□ 0.05
COL4A2-206ENST00000480609 BTNL9Q6UXG8 535 aa15.34■□□□□ 0.05
COL4A2-206ENST00000480609 NOL8Q76FK4 1167 aaKnown RBP15.34■□□□□ 0.05
COL4A2-206ENST00000480609 NECAB1Q8N987 351 aa15.34■□□□□ 0.05
COL4A2-206ENST00000480609 RBM46Q8TBY0 533 aaKnown RBP15.34■□□□□ 0.05
COL4A2-206ENST00000480609 SPZ1Q9BXG8 430 aa15.34■□□□□ 0.05
COL4A2-206ENST00000480609 VCPKMTQ9H867 229 aa15.34■□□□□ 0.05
COL4A2-206ENST00000480609 GPBP1L1Q9HC44 474 aaPredicted RBP15.34■□□□□ 0.05
COL4A2-206ENST00000480609 CLEC11AQ9Y240 323 aa15.34■□□□□ 0.05
COL4A2-206ENST00000480609 KIF3AQ9Y496 699 aa15.34■□□□□ 0.05
COL4A2-206ENST00000480609 SNCAIPQ9Y6H5 919 aa15.34■□□□□ 0.05
COL4A2-206ENST00000480609 C19orf81C9J6K1 198 aa15.33■□□□□ 0.04
COL4A2-206ENST00000480609 F5H6K3 240 aa15.33■□□□□ 0.04
COL4A2-206ENST00000480609 CPLX1O14810 134 aa15.33■□□□□ 0.04
COL4A2-206ENST00000480609 PARP1P09874 1014 aaKnown RBP15.33■□□□□ 0.04
COL4A2-206ENST00000480609 ADD1P35611 737 aaKnown RBP15.33■□□□□ 0.04
COL4A2-206ENST00000480609 USP14P54578 494 aa15.33■□□□□ 0.04
COL4A2-206ENST00000480609 CCT2P78371 535 aaKnown RBP15.33■□□□□ 0.04
COL4A2-206ENST00000480609 PPATQ06203 517 aa15.33■□□□□ 0.04
COL4A2-206ENST00000480609 KLRC3Q07444 240 aa15.33■□□□□ 0.04
COL4A2-206ENST00000480609 VGLL4Q14135 290 aa15.33■□□□□ 0.04
COL4A2-206ENST00000480609 NBPF11Q86T75 865 aa15.33■□□□□ 0.04
COL4A2-206ENST00000480609 RIOX1Q9H6W3 641 aa15.33■□□□□ 0.04
COL4A2-206ENST00000480609 GOPCQ9HD26 462 aa15.33■□□□□ 0.04
COL4A2-206ENST00000480609 PICK1Q9NRD5 415 aa15.33■□□□□ 0.04
COL4A2-206ENST00000480609 PASKQ96RG2 1323 aa15.33■□□□□ 0.04
COL4A2-206ENST00000480609 PHIPQ8WWQ0 1821 aa15.33■□□□□ 0.04
COL4A2-206ENST00000480609 SPDYE5A6NIY4 337 aa15.32■□□□□ 0.04
COL4A2-206ENST00000480609 USP17L10C9JJH3 530 aa15.32■□□□□ 0.04
COL4A2-206ENST00000480609 PRPF3O43395 683 aaKnown RBP15.32■□□□□ 0.04
COL4A2-206ENST00000480609 FMNL1O95466 1100 aaPredicted RBP15.32■□□□□ 0.04
COL4A2-206ENST00000480609 PDCP20941 246 aa15.32■□□□□ 0.04
COL4A2-206ENST00000480609 BACE1P56817 501 aa15.32■□□□□ 0.04
COL4A2-206ENST00000480609 STK3Q13188 491 aa15.32■□□□□ 0.04
COL4A2-206ENST00000480609 ERO1BQ86YB8 467 aa15.32■□□□□ 0.04
COL4A2-206ENST00000480609 CLEC10AQ8IUN9 316 aa15.32■□□□□ 0.04
COL4A2-206ENST00000480609 ZNF280CQ8ND82 737 aa15.32■□□□□ 0.04
COL4A2-206ENST00000480609 MTMR8Q96EF0 704 aa15.32■□□□□ 0.04
COL4A2-206ENST00000480609 MYL10Q9BUA6 226 aa15.32■□□□□ 0.04
COL4A2-206ENST00000480609 NCOA5Q9HCD5 579 aaKnown RBP15.32■□□□□ 0.04
COL4A2-206ENST00000480609 KCNH4Q9UQ05 1017 aa15.32■□□□□ 0.04
COL4A2-206ENST00000480609 SMC3Q9UQE7 1217 aa15.32■□□□□ 0.04
COL4A2-206ENST00000480609 AFG3L2Q9Y4W6 797 aa15.32■□□□□ 0.04
COL4A2-206ENST00000480609 CSADQ9Y600 493 aa15.32■□□□□ 0.04
COL4A2-206ENST00000480609 OTOFQ9HC10 1997 aa15.32■□□□□ 0.04
COL4A2-206ENST00000480609 PTPDC1A2A3K4 754 aa15.31■□□□□ 0.04
COL4A2-206ENST00000480609 CXCL11O14625 94 aa15.31■□□□□ 0.04
COL4A2-206ENST00000480609 NDUFB10O96000 172 aa15.31■□□□□ 0.04
COL4A2-206ENST00000480609 HSP90AA1P07900 732 aaKnown RBP15.31■□□□□ 0.04
COL4A2-206ENST00000480609 FDPSP14324 419 aaKnown RBP15.31■□□□□ 0.04
COL4A2-206ENST00000480609 SLFN13Q68D06 897 aa15.31■□□□□ 0.04
COL4A2-206ENST00000480609 TEX2Q8IWB9 1127 aa15.31■□□□□ 0.04
COL4A2-206ENST00000480609 LRRC47Q8N1G4 583 aaKnown RBP15.31■□□□□ 0.04
COL4A2-206ENST00000480609 ACER1Q8TDN7 264 aa15.31■□□□□ 0.04
COL4A2-206ENST00000480609 NUP133Q8WUM0 1156 aa15.31■□□□□ 0.04
COL4A2-206ENST00000480609 ZKSCAN4Q969J2 545 aaPredicted RBP15.31■□□□□ 0.04
COL4A2-206ENST00000480609 CNTNAP5Q8WYK1 1306 aa15.31■□□□□ 0.04
COL4A2-206ENST00000480609 WDR46O15213 610 aaKnown RBP15.3■□□□□ 0.04
COL4A2-206ENST00000480609 DEXIO95424 95 aa15.3■□□□□ 0.04
COL4A2-206ENST00000480609 ECE1P42892 770 aa15.3■□□□□ 0.04
COL4A2-206ENST00000480609 SLC4A3P48751 1232 aa15.3■□□□□ 0.04
COL4A2-206ENST00000480609 DLK2Q6UY11 383 aa15.3■□□□□ 0.04
COL4A2-206ENST00000480609 SRBD1Q8N5C6 995 aaKnown RBP15.3■□□□□ 0.04
COL4A2-206ENST00000480609 WASF1Q92558 559 aa15.3■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms