RNA–Protein interactions for RNA: ENST00000479099.2

RC3H1-204, Transcript of ring finger and CCCH-type domains 1, humanhuman

TSL 3

Gene RC3H1, Length 481 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1-204ENST00000479099 ZNF180Q9UJW8 692 aa7.18□□□□□ -1.26
RC3H1-204ENST00000479099 SUPT16HQ9Y5B9 1047 aaKnown RBP7.18□□□□□ -1.26
RC3H1-204ENST00000479099 SETD1BQ9UPS6 1966 aaKnown RBP7.18□□□□□ -1.26
RC3H1-204ENST00000479099 PHLDB1Q86UU1 1377 aa7.18□□□□□ -1.26
RC3H1-204ENST00000479099 ANO9A1A5B4 782 aa7.17□□□□□ -1.26
RC3H1-204ENST00000479099 PIP5K1CO60331 668 aa7.17□□□□□ -1.26
RC3H1-204ENST00000479099 TNFRSF21O75509 655 aa7.17□□□□□ -1.26
RC3H1-204ENST00000479099 PSAPP07602 524 aa7.17□□□□□ -1.26
RC3H1-204ENST00000479099 RBP3P10745 1247 aa7.17□□□□□ -1.26
RC3H1-204ENST00000479099 CPEP16870 476 aa7.17□□□□□ -1.26
RC3H1-204ENST00000479099 TYRP1P17643 537 aa7.17□□□□□ -1.26
RC3H1-204ENST00000479099 RRM1P23921 792 aa7.17□□□□□ -1.26
RC3H1-204ENST00000479099 GIPRP48546 466 aa7.17□□□□□ -1.26
RC3H1-204ENST00000479099 PABPC4Q13310 644 aaKnown RBP eCLIP7.17□□□□□ -1.26
RC3H1-204ENST00000479099 SETDB1Q15047 1291 aa7.17□□□□□ -1.26
RC3H1-204ENST00000479099 PUM3Q15397 648 aaKnown RBP7.17□□□□□ -1.26
RC3H1-204ENST00000479099 CXorf57Q6NSI4 855 aaKnown RBP7.17□□□□□ -1.26
RC3H1-204ENST00000479099 MMS22LQ6ZRQ5 1243 aa7.17□□□□□ -1.26
RC3H1-204ENST00000479099 TOGARAM2Q6ZUX3 1019 aa7.17□□□□□ -1.26
RC3H1-204ENST00000479099 HFE2Q6ZVN8 426 aa7.17□□□□□ -1.26
RC3H1-204ENST00000479099 ZBTB46Q86UZ6 589 aa7.17□□□□□ -1.26
RC3H1-204ENST00000479099 ZNF354CQ86Y25 554 aa7.17□□□□□ -1.26
RC3H1-204ENST00000479099 ST13P5Q8NFI4 369 aaPredicted RBP7.17□□□□□ -1.26
RC3H1-204ENST00000479099 TP53INP1Q96A56 240 aa7.17□□□□□ -1.26
RC3H1-204ENST00000479099 ELAC2Q9BQ52 826 aaKnown RBP7.17□□□□□ -1.26
RC3H1-204ENST00000479099 SSBP4Q9BWG4 385 aaPredicted RBP7.17□□□□□ -1.26
RC3H1-204ENST00000479099 GGNBP2Q9H3C7 697 aa7.17□□□□□ -1.26
RC3H1-204ENST00000479099 PRDM11Q9NQV5 511 aa7.17□□□□□ -1.26
RC3H1-204ENST00000479099 UBP1Q9NZI7 540 aa7.17□□□□□ -1.26
RC3H1-204ENST00000479099 KCNMB2Q9Y691 235 aa7.17□□□□□ -1.26
RC3H1-204ENST00000479099 SCO2A0A1W2PP80 73 aa7.16□□□□□ -1.26
RC3H1-204ENST00000479099 PRSS47A8MTI9 375 aa7.16□□□□□ -1.26
RC3H1-204ENST00000479099 VSTM5A8MXK1 200 aa7.16□□□□□ -1.26
RC3H1-204ENST00000479099 ABLIM3O94929 683 aa7.16□□□□□ -1.26
RC3H1-204ENST00000479099 HOXD8P13378 290 aaPredicted RBP7.16□□□□□ -1.26
RC3H1-204ENST00000479099 PHKG2P15735 406 aa7.16□□□□□ -1.26
RC3H1-204ENST00000479099 GARTP22102 1010 aa7.16□□□□□ -1.26
RC3H1-204ENST00000479099 SERPINB3P29508 390 aa7.16□□□□□ -1.26
RC3H1-204ENST00000479099 DDIT3P35638 169 aa7.16□□□□□ -1.26
RC3H1-204ENST00000479099 SOX18P35713 384 aa7.16□□□□□ -1.26
RC3H1-204ENST00000479099 EIF6P56537 245 aaKnown RBP7.16□□□□□ -1.26
RC3H1-204ENST00000479099 GPSM2P81274 684 aa7.16□□□□□ -1.26
RC3H1-204ENST00000479099 KRT72Q14CN4 511 aa7.16□□□□□ -1.26
RC3H1-204ENST00000479099 CDC37Q16543 378 aaPredicted RBP7.16□□□□□ -1.26
RC3H1-204ENST00000479099 TBC1D10BQ4KMP7 808 aaPredicted RBP7.16□□□□□ -1.26
RC3H1-204ENST00000479099 PRPF40BQ6NWY9 871 aaKnown RBP7.16□□□□□ -1.26
RC3H1-204ENST00000479099 CASC1Q6TDU7 716 aa7.16□□□□□ -1.26
RC3H1-204ENST00000479099 IGF2-ASQ6U949 168 aa7.16□□□□□ -1.26
RC3H1-204ENST00000479099 NXPE4Q6UWF7 544 aa7.16□□□□□ -1.26
RC3H1-204ENST00000479099 SLITRK4Q8IW52 837 aa7.16□□□□□ -1.26
RC3H1-204ENST00000479099 OR6P1Q8NGX9 317 aa7.16□□□□□ -1.26
RC3H1-204ENST00000479099 SMAD5Q99717 465 aaKnown RBP7.16□□□□□ -1.26
RC3H1-204ENST00000479099 LRRC27Q9C0I9 530 aa7.16□□□□□ -1.26
RC3H1-204ENST00000479099 CSRNP2Q9H175 543 aa7.16□□□□□ -1.26
RC3H1-204ENST00000479099 SLC5A4Q9NY91 659 aa7.16□□□□□ -1.26
RC3H1-204ENST00000479099 C9orf78Q9NZ63 289 aaPredicted RBP7.16□□□□□ -1.26
RC3H1-204ENST00000479099 PGAP2Q9UHJ9 254 aa7.16□□□□□ -1.26
RC3H1-204ENST00000479099 EVLQ9UI08 416 aaPredicted RBP7.16□□□□□ -1.26
RC3H1-204ENST00000479099 HDAC9Q9UKV0 1011 aa7.16□□□□□ -1.26
RC3H1-204ENST00000479099 PPT2Q9UMR5 302 aa7.16□□□□□ -1.26
RC3H1-204ENST00000479099 IPPQ9Y573 584 aa7.16□□□□□ -1.26
RC3H1-204ENST00000479099 LOC102724428A0A0B4J2F2 783 aa7.15□□□□□ -1.26
RC3H1-204ENST00000479099 F6X3S4 739 aa7.15□□□□□ -1.26
RC3H1-204ENST00000479099 CBFA2T2O43439 604 aa7.15□□□□□ -1.26
RC3H1-204ENST00000479099 MMP20O60882 483 aa7.15□□□□□ -1.26
RC3H1-204ENST00000479099 GJB6O95452 261 aa7.15□□□□□ -1.26
RC3H1-204ENST00000479099 GHRHP01286 108 aa7.15□□□□□ -1.26
RC3H1-204ENST00000479099 RPLP1P05386 114 aaKnown RBP7.15□□□□□ -1.26
RC3H1-204ENST00000479099 CT47B1P0C2W7 299 aaPredicted RBP7.15□□□□□ -1.26
RC3H1-204ENST00000479099 RLBP1P12271 317 aa7.15□□□□□ -1.26
RC3H1-204ENST00000479099 SIK1P57059 783 aa7.15□□□□□ -1.26
RC3H1-204ENST00000479099 ZNF280AP59817 542 aaPredicted RBP7.15□□□□□ -1.26
RC3H1-204ENST00000479099 ITKQ08881 620 aa7.15□□□□□ -1.26
RC3H1-204ENST00000479099 LONRF2Q1L5Z9 754 aa7.15□□□□□ -1.26
RC3H1-204ENST00000479099 TTLL5Q6EMB2 1281 aa7.15□□□□□ -1.26
RC3H1-204ENST00000479099 IFNL2Q8IZJ0 200 aa7.15□□□□□ -1.26
RC3H1-204ENST00000479099 WFDC12Q8WWY7 111 aa7.15□□□□□ -1.26
RC3H1-204ENST00000479099 JPH3Q8WXH2 748 aaPredicted RBP7.15□□□□□ -1.26
RC3H1-204ENST00000479099 NKD1Q969G9 470 aa7.15□□□□□ -1.26
RC3H1-204ENST00000479099 PLD4Q96BZ4 506 aa7.15□□□□□ -1.26
RC3H1-204ENST00000479099 MTMR8Q96EF0 704 aa7.15□□□□□ -1.26
RC3H1-204ENST00000479099 SCLT1Q96NL6 688 aa7.15□□□□□ -1.26
RC3H1-204ENST00000479099 SERINC2Q96SA4 455 aa7.15□□□□□ -1.26
RC3H1-204ENST00000479099 YIPF4Q9BSR8 244 aa7.15□□□□□ -1.26
RC3H1-204ENST00000479099 BCO2Q9BYV7 579 aa7.15□□□□□ -1.26
RC3H1-204ENST00000479099 RHOBTB2Q9BYZ6 727 aa7.15□□□□□ -1.26
RC3H1-204ENST00000479099 ALDH8A1Q9H2A2 487 aaPredicted RBP7.15□□□□□ -1.26
RC3H1-204ENST00000479099 RETREG1Q9H6L5 497 aa7.15□□□□□ -1.26
RC3H1-204ENST00000479099 PLCB1Q9NQ66 1216 aa7.15□□□□□ -1.26
RC3H1-204ENST00000479099 CLSPNQ9HAW4 1339 aa7.15□□□□□ -1.26
RC3H1-204ENST00000479099 DEAF1O75398 565 aaPredicted RBP7.14□□□□□ -1.27
RC3H1-204ENST00000479099 U2AF1L5P0DN76 240 aaPredicted RBP7.14□□□□□ -1.27
RC3H1-204ENST00000479099 U2AF1Q01081 240 aaKnown RBP eCLIP7.14□□□□□ -1.27
RC3H1-204ENST00000479099 C8orf34Q49A92 452 aa7.14□□□□□ -1.27
RC3H1-204ENST00000479099 LARP1BQ659C4 914 aaKnown RBP7.14□□□□□ -1.27
RC3H1-204ENST00000479099 PPP4R3AQ6IN85 833 aa7.14□□□□□ -1.27
RC3H1-204ENST00000479099 ANKRD23Q86SG2 305 aa7.14□□□□□ -1.27
RC3H1-204ENST00000479099 NLRP13Q86W25 1043 aa7.14□□□□□ -1.27
RC3H1-204ENST00000479099 PI4K2BQ8TCG2 481 aa7.14□□□□□ -1.27
RC3H1-204ENST00000479099 TIFAQ96CG3 184 aa7.14□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms