RNA–Protein interactions for RNA: ENST00000476379.5

CCDC39-204, Transcript of coiled-coil domain containing 39, humanhuman

TSL 2

Gene CCDC39, Length 4,451 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-204ENST00000476379 PDE11AQ9HCR9 933 aa5.64□□□□□ -1.51
CCDC39-204ENST00000476379 GOPCQ9HD26 462 aa5.64□□□□□ -1.51
CCDC39-204ENST00000476379 SMARCAL1Q9NZC9 954 aa5.64□□□□□ -1.51
CCDC39-204ENST00000476379 HDAC6Q9UBN7 1215 aa5.64□□□□□ -1.51
CCDC39-204ENST00000476379 NEDD4P46934 1319 aa5.64□□□□□ -1.51
CCDC39-204ENST00000476379 SHTN1A0MZ66 631 aa5.64□□□□□ -1.51
CCDC39-204ENST00000476379 BUB1O43683 1085 aa5.64□□□□□ -1.51
CCDC39-204ENST00000476379 AKR1B10O60218 316 aa5.64□□□□□ -1.51
CCDC39-204ENST00000476379 SORBS3O60504 671 aa5.64□□□□□ -1.51
CCDC39-204ENST00000476379 PLEKHA8P1O95397 391 aa5.64□□□□□ -1.51
CCDC39-204ENST00000476379 ZSCAN20P17040 1043 aaPredicted RBP5.64□□□□□ -1.51
CCDC39-204ENST00000476379 HPDP32754 393 aaPredicted RBP5.64□□□□□ -1.51
CCDC39-204ENST00000476379 NOP2P46087 812 aaKnown RBP5.64□□□□□ -1.51
CCDC39-204ENST00000476379 ST5P78524 1137 aa5.64□□□□□ -1.51
CCDC39-204ENST00000476379 PDE4BQ07343 736 aa5.64□□□□□ -1.51
CCDC39-204ENST00000476379 POSTNQ15063 836 aa5.64□□□□□ -1.51
CCDC39-204ENST00000476379 ARHGAP27Q6ZUM4 889 aa5.64□□□□□ -1.51
CCDC39-204ENST00000476379 DNAAF5Q86Y56 855 aa5.64□□□□□ -1.51
CCDC39-204ENST00000476379 C2CD5Q86YS7 1000 aa5.64□□□□□ -1.51
CCDC39-204ENST00000476379 SLC44A5Q8NCS7 719 aa5.64□□□□□ -1.51
CCDC39-204ENST00000476379 DYNLL2Q96FJ2 89 aa5.64□□□□□ -1.51
CCDC39-204ENST00000476379 ZNHIT6Q9NWK9 470 aaKnown RBP5.64□□□□□ -1.51
CCDC39-204ENST00000476379 AKAP12Q02952 1782 aa5.64□□□□□ -1.51
CCDC39-204ENST00000476379 CEP290O15078 2479 aa5.64□□□□□ -1.51
CCDC39-204ENST00000476379 UFL1O94874 794 aa5.64□□□□□ -1.51
CCDC39-204ENST00000476379 TXKP42681 527 aa5.64□□□□□ -1.51
CCDC39-204ENST00000476379 TNNI2P48788 182 aa5.64□□□□□ -1.51
CCDC39-204ENST00000476379 ATP1A2P50993 1020 aa5.64□□□□□ -1.51
CCDC39-204ENST00000476379 CHMP4BP1P59074 171 aa5.64□□□□□ -1.51
CCDC39-204ENST00000476379 RASSF7Q02833 373 aa5.64□□□□□ -1.51
CCDC39-204ENST00000476379 LRRC41Q15345 812 aa5.64□□□□□ -1.51
CCDC39-204ENST00000476379 ZYXQ15942 572 aaKnown RBP5.64□□□□□ -1.51
CCDC39-204ENST00000476379 CCDC122Q5T0U0 273 aa5.64□□□□□ -1.51
CCDC39-204ENST00000476379 ADALQ6DHV7 355 aa5.64□□□□□ -1.51
CCDC39-204ENST00000476379 APOA5Q6Q788 366 aa5.64□□□□□ -1.51
CCDC39-204ENST00000476379 TPTE2Q6XPS3 522 aa5.64□□□□□ -1.51
CCDC39-204ENST00000476379 CLEC10AQ8IUN9 316 aa5.64□□□□□ -1.51
CCDC39-204ENST00000476379 KIAA0825Q8IV33 1275 aa5.64□□□□□ -1.51
CCDC39-204ENST00000476379 DHX40Q8IX18 779 aaKnown RBP5.64□□□□□ -1.51
CCDC39-204ENST00000476379 CCDC150Q8NCX0 1101 aa5.64□□□□□ -1.51
CCDC39-204ENST00000476379 GPCPD1Q9NPB8 672 aa5.64□□□□□ -1.51
CCDC39-204ENST00000476379 GNL3LQ9NVN8 582 aaKnown RBP5.64□□□□□ -1.51
CCDC39-204ENST00000476379 GDAQ9Y2T3 454 aa5.64□□□□□ -1.51
CCDC39-204ENST00000476379 PPP2R2CQ9Y2T4 447 aa5.64□□□□□ -1.51
CCDC39-204ENST00000476379 ZNF609O15014 1411 aa5.63□□□□□ -1.51
CCDC39-204ENST00000476379 RPS6KA4O75676 772 aa5.63□□□□□ -1.51
CCDC39-204ENST00000476379 CCDC175P0C221 793 aa5.63□□□□□ -1.51
CCDC39-204ENST00000476379 FDPSP14324 419 aaKnown RBP5.63□□□□□ -1.51
CCDC39-204ENST00000476379 SLC7A5Q01650 507 aa5.63□□□□□ -1.51
CCDC39-204ENST00000476379 KIF23Q02241 960 aaPredicted RBP5.63□□□□□ -1.51
CCDC39-204ENST00000476379 SP4Q02446 784 aa5.63□□□□□ -1.51
CCDC39-204ENST00000476379 TCP10Q12799 353 aa5.63□□□□□ -1.51
CCDC39-204ENST00000476379 DIXDC1Q155Q3 683 aa5.63□□□□□ -1.51
CCDC39-204ENST00000476379 CAVIN4Q5BKX8 364 aa5.63□□□□□ -1.51
CCDC39-204ENST00000476379 SOGA3Q5TF21 947 aa5.63□□□□□ -1.51
CCDC39-204ENST00000476379 CTR9Q6PD62 1173 aa5.63□□□□□ -1.51
CCDC39-204ENST00000476379 AMOTL1Q8IY63 956 aa5.63□□□□□ -1.51
CCDC39-204ENST00000476379 TDRD7Q8NHU6 1098 aaKnown RBP5.63□□□□□ -1.51
CCDC39-204ENST00000476379 TIGD1Q96MW7 591 aa5.63□□□□□ -1.51
CCDC39-204ENST00000476379 MROH7-TTC4A0A0A0MT08 1334 aa5.63□□□□□ -1.51
CCDC39-204ENST00000476379 PNPLA7Q6ZV29 1317 aa5.63□□□□□ -1.51
CCDC39-204ENST00000476379 MAGEB6P1A0A0J9YX57 407 aa5.63□□□□□ -1.51
CCDC39-204ENST00000476379 BACH1O14867 736 aa5.63□□□□□ -1.51
CCDC39-204ENST00000476379 DPEP1P16444 411 aa5.63□□□□□ -1.51
CCDC39-204ENST00000476379 KCNA4P22459 653 aa5.63□□□□□ -1.51
CCDC39-204ENST00000476379 NLRP12P59046 1061 aa5.63□□□□□ -1.51
CCDC39-204ENST00000476379 INF2Q27J81 1249 aa5.63□□□□□ -1.51
CCDC39-204ENST00000476379 E4F1Q66K89 784 aaPredicted RBP5.63□□□□□ -1.51
CCDC39-204ENST00000476379 IFNL3Q8IZI9 196 aa5.63□□□□□ -1.51
CCDC39-204ENST00000476379 ZNF444Q8N0Y2 327 aaPredicted RBP5.63□□□□□ -1.51
CCDC39-204ENST00000476379 NKX2-3Q8TAU0 364 aa5.63□□□□□ -1.51
CCDC39-204ENST00000476379 SYMPKQ92797 1274 aaKnown RBP5.63□□□□□ -1.51
CCDC39-204ENST00000476379 ERO1AQ96HE7 468 aa5.63□□□□□ -1.51
CCDC39-204ENST00000476379 CDCA7Q9BWT1 371 aaPredicted RBP5.63□□□□□ -1.51
CCDC39-204ENST00000476379 TM6SF1Q9BZW5 370 aa5.63□□□□□ -1.51
CCDC39-204ENST00000476379 FHDC1Q9C0D6 1143 aaPredicted RBP5.63□□□□□ -1.51
CCDC39-204ENST00000476379 ZNF408Q9H9D4 720 aa5.63□□□□□ -1.51
CCDC39-204ENST00000476379 SPTLC3Q9NUV7 552 aa5.63□□□□□ -1.51
CCDC39-204ENST00000476379 ZBTB21Q9ULJ3 1066 aa5.63□□□□□ -1.51
CCDC39-204ENST00000476379 FRMPD2Q68DX3 1309 aaPredicted RBP5.63□□□□□ -1.51
CCDC39-204ENST00000476379 TOPAZ1Q8N9V7 1692 aa5.63□□□□□ -1.51
CCDC39-204ENST00000476379 SNAP25P60880 206 aa5.63□□□□□ -1.51
CCDC39-204ENST00000476379 DMTNQ08495 405 aa5.63□□□□□ -1.51
CCDC39-204ENST00000476379 RBL2Q08999 1139 aa5.63□□□□□ -1.51
CCDC39-204ENST00000476379 NKX1-1Q15270 411 aaPredicted RBP5.63□□□□□ -1.51
CCDC39-204ENST00000476379 NAA35Q5VZE5 725 aa5.63□□□□□ -1.51
CCDC39-204ENST00000476379 SPATA5Q8NB90 893 aa5.63□□□□□ -1.51
CCDC39-204ENST00000476379 TTLL11Q8NHH1 800 aa5.63□□□□□ -1.51
CCDC39-204ENST00000476379 SMCR8Q8TEV9 937 aaPredicted RBP5.63□□□□□ -1.51
CCDC39-204ENST00000476379 MRRFQ96E11 262 aaKnown RBP5.63□□□□□ -1.51
CCDC39-204ENST00000476379 TNS2Q63HR2 1409 aa5.63□□□□□ -1.51
CCDC39-204ENST00000476379 TNKSO95271 1327 aa5.63□□□□□ -1.51
CCDC39-204ENST00000476379 TMEM110-MUSTN1A8MSY1 372 aa5.62□□□□□ -1.51
CCDC39-204ENST00000476379 TRIM66O15016 1216 aa5.62□□□□□ -1.51
CCDC39-204ENST00000476379 GUCY2FP51841 1108 aa5.62□□□□□ -1.51
CCDC39-204ENST00000476379 FMR1Q06787 632 aaKnown RBP eCLIP5.62□□□□□ -1.51
CCDC39-204ENST00000476379 PPARAQ07869 468 aa5.62□□□□□ -1.51
CCDC39-204ENST00000476379 SMC1AQ14683 1233 aaKnown RBP5.62□□□□□ -1.51
CCDC39-204ENST00000476379 ZMYM1Q5SVZ6 1142 aa5.62□□□□□ -1.51
CCDC39-204ENST00000476379 TYW1BQ6NUM6 668 aa5.62□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms