RNA–Protein interactions for RNA: ENST00000476367.5

CCNL1-217, Transcript of cyclin L1, humanhuman

TSL 1 (best)

Gene CCNL1, Length 1,603 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNL1-217ENST00000476367 RAD21O60216 631 aa16.98■□□□□ 0.31
CCNL1-217ENST00000476367 CPA1P15085 419 aa16.98■□□□□ 0.31
CCNL1-217ENST00000476367 LBX1P52954 281 aa16.98■□□□□ 0.31
CCNL1-217ENST00000476367 RCSD1Q6JBY9 416 aa16.98■□□□□ 0.31
CCNL1-217ENST00000476367 SH2D4AQ9H788 454 aa16.98■□□□□ 0.31
CCNL1-217ENST00000476367 CYP2C8P10632 490 aa16.97■□□□□ 0.31
CCNL1-217ENST00000476367 VCAM1P19320 739 aa16.97■□□□□ 0.31
CCNL1-217ENST00000476367 RBM25P49756 843 aaKnown RBP16.97■□□□□ 0.31
CCNL1-217ENST00000476367 SPICE1Q8N0Z3 855 aa16.97■□□□□ 0.31
CCNL1-217ENST00000476367 ZFYVE28Q9HCC9 887 aa16.97■□□□□ 0.31
CCNL1-217ENST00000476367 ZCCHC17Q9NP64 241 aaKnown RBP16.97■□□□□ 0.31
CCNL1-217ENST00000476367 MTMR4Q9NYA4 1195 aa16.97■□□□□ 0.31
CCNL1-217ENST00000476367 TMX2Q9Y320 296 aa16.97■□□□□ 0.31
CCNL1-217ENST00000476367 PARP14Q460N5 1801 aa16.97■□□□□ 0.31
CCNL1-217ENST00000476367 CHST3Q7LGC8 479 aa16.96■□□□□ 0.31
CCNL1-217ENST00000476367 LRRC47Q8N1G4 583 aaKnown RBP16.96■□□□□ 0.31
CCNL1-217ENST00000476367 ESR2Q92731 530 aa16.96■□□□□ 0.31
CCNL1-217ENST00000476367 C12orf42Q96LP6 360 aa16.96■□□□□ 0.31
CCNL1-217ENST00000476367 PARK7Q99497 189 aaKnown RBP16.96■□□□□ 0.31
CCNL1-217ENST00000476367 SENP2Q9HC62 589 aa16.96■□□□□ 0.31
CCNL1-217ENST00000476367 GPHNQ9NQX3 736 aaPredicted RBP16.96■□□□□ 0.31
CCNL1-217ENST00000476367 NYAP2Q9P242 653 aa16.96■□□□□ 0.31
CCNL1-217ENST00000476367 CLIP2Q9UDT6 1046 aa16.96■□□□□ 0.31
CCNL1-217ENST00000476367 STX8Q9UNK0 236 aa16.96■□□□□ 0.31
CCNL1-217ENST00000476367 TTLL1O95922 423 aa16.96■□□□□ 0.3
CCNL1-217ENST00000476367 EXOSC10Q01780 885 aaKnown RBP16.96■□□□□ 0.3
CCNL1-217ENST00000476367 PABPC4Q13310 644 aaKnown RBP eCLIP16.96■□□□□ 0.3
CCNL1-217ENST00000476367 SEC23AQ15436 765 aa16.96■□□□□ 0.3
CCNL1-217ENST00000476367 KIAA1755Q5JYT7 1200 aa16.96■□□□□ 0.3
CCNL1-217ENST00000476367 RNF20Q5VTR2 975 aa16.96■□□□□ 0.3
CCNL1-217ENST00000476367 SMCR8Q8TEV9 937 aaPredicted RBP16.96■□□□□ 0.3
CCNL1-217ENST00000476367 ZKSCAN3Q9BRR0 538 aa16.96■□□□□ 0.3
CCNL1-217ENST00000476367 CFHR5Q9BXR6 569 aa16.96■□□□□ 0.3
CCNL1-217ENST00000476367 VCPKMTQ9H867 229 aa16.96■□□□□ 0.3
CCNL1-217ENST00000476367 CNNM2Q9H8M5 875 aa16.96■□□□□ 0.3
CCNL1-217ENST00000476367 GOPCQ9HD26 462 aa16.96■□□□□ 0.3
CCNL1-217ENST00000476367 TCP11L1Q9NUJ3 509 aa16.96■□□□□ 0.3
CCNL1-217ENST00000476367 ZSWIM8A7E2V4 1837 aa16.95■□□□□ 0.3
CCNL1-217ENST00000476367 IRX3P78415 501 aaPredicted RBP16.95■□□□□ 0.3
CCNL1-217ENST00000476367 NCOA7Q8NI08 942 aa16.95■□□□□ 0.3
CCNL1-217ENST00000476367 IGDCC4Q8TDY8 1250 aa16.95■□□□□ 0.3
CCNL1-217ENST00000476367 TBC1D32Q96NH3 1257 aa16.95■□□□□ 0.3
CCNL1-217ENST00000476367 C22orf23Q9BZE7 217 aa16.95■□□□□ 0.3
CCNL1-217ENST00000476367 KRT23Q9C075 422 aa16.95■□□□□ 0.3
CCNL1-217ENST00000476367 ASCC2Q9H1I8 757 aaPredicted RBP16.95■□□□□ 0.3
CCNL1-217ENST00000476367 RPAP3Q9H6T3 665 aaPredicted RBP16.95■□□□□ 0.3
CCNL1-217ENST00000476367 PNMA3Q9UL41 463 aa16.95■□□□□ 0.3
CCNL1-217ENST00000476367 SLC45A1Q9Y2W3 748 aa16.95■□□□□ 0.3
CCNL1-217ENST00000476367 RLFQ13129 1914 aa16.94■□□□□ 0.3
CCNL1-217ENST00000476367 ZKSCAN1P17029 563 aaPredicted RBP16.94■□□□□ 0.3
CCNL1-217ENST00000476367 TRDNQ13061 729 aa16.94■□□□□ 0.3
CCNL1-217ENST00000476367 RALYLQ86SE5 291 aaKnown RBP16.94■□□□□ 0.3
CCNL1-217ENST00000476367 ENAHQ8N8S7 591 aaPredicted RBP16.94■□□□□ 0.3
CCNL1-217ENST00000476367 TCEANC2Q96MN5 208 aa16.94■□□□□ 0.3
CCNL1-217ENST00000476367 NEK1Q96PY6 1258 aa16.94■□□□□ 0.3
CCNL1-217ENST00000476367 TANGO6Q9C0B7 1094 aa16.94■□□□□ 0.3
CCNL1-217ENST00000476367 CPA4Q9UI42 421 aa16.94■□□□□ 0.3
CCNL1-217ENST00000476367 ADGRA2Q96PE1 1338 aa16.93■□□□□ 0.3
CCNL1-217ENST00000476367 GPR25O00155 361 aa16.93■□□□□ 0.3
CCNL1-217ENST00000476367 TLR2O60603 784 aa16.93■□□□□ 0.3
CCNL1-217ENST00000476367 OSBPP22059 807 aa16.93■□□□□ 0.3
CCNL1-217ENST00000476367 ANAPC15P60006 121 aa16.93■□□□□ 0.3
CCNL1-217ENST00000476367 LPAR1Q92633 364 aa16.93■□□□□ 0.3
CCNL1-217ENST00000476367 CHMP4CQ96CF2 233 aa16.93■□□□□ 0.3
CCNL1-217ENST00000476367 JAKMIP1Q96N16 626 aaKnown RBP16.93■□□□□ 0.3
CCNL1-217ENST00000476367 ZSWIM6Q9HCJ5 1215 aa16.93■□□□□ 0.3
CCNL1-217ENST00000476367 MTMR7Q9Y216 660 aa16.93■□□□□ 0.3
CCNL1-217ENST00000476367 PPP4R3BQ5MIZ7 849 aa16.92■□□□□ 0.3
CCNL1-217ENST00000476367 RASGRP2Q7LDG7 609 aa16.92■□□□□ 0.3
CCNL1-217ENST00000476367 IQCA1Q86XH1 822 aa16.92■□□□□ 0.3
CCNL1-217ENST00000476367 ZNF296Q8WUU4 475 aaPredicted RBP16.92■□□□□ 0.3
CCNL1-217ENST00000476367 MKL1Q969V6 931 aa16.92■□□□□ 0.3
CCNL1-217ENST00000476367 NUP88Q99567 741 aaPredicted RBP16.92■□□□□ 0.3
CCNL1-217ENST00000476367 LRRC2Q9BYS8 371 aa16.92■□□□□ 0.3
CCNL1-217ENST00000476367 TM6SF1Q9BZW5 370 aa16.92■□□□□ 0.3
CCNL1-217ENST00000476367 COL11A1P12107 1806 aaPredicted RBP16.92■□□□□ 0.3
CCNL1-217ENST00000476367 MGAMO43451 1857 aa16.92■□□□□ 0.3
CCNL1-217ENST00000476367 USP17L15C9J2P7 530 aa16.92■□□□□ 0.3
CCNL1-217ENST00000476367 USP17L13C9JLJ4 530 aa16.92■□□□□ 0.3
CCNL1-217ENST00000476367 USP17L11C9JVI0 530 aa16.92■□□□□ 0.3
CCNL1-217ENST00000476367 USP17L18D6R9N7 530 aa16.92■□□□□ 0.3
CCNL1-217ENST00000476367 USP17L22D6RA61 530 aa16.92■□□□□ 0.3
CCNL1-217ENST00000476367 USP17L17D6RBQ6 530 aa16.92■□□□□ 0.3
CCNL1-217ENST00000476367 USP17L19D6RCP7 530 aa16.92■□□□□ 0.3
CCNL1-217ENST00000476367 USP17L20D6RJB6 530 aa16.92■□□□□ 0.3
CCNL1-217ENST00000476367 WDR46O15213 610 aaKnown RBP16.92■□□□□ 0.3
CCNL1-217ENST00000476367 ECM2O94769 699 aaPredicted RBP16.92■□□□□ 0.3
CCNL1-217ENST00000476367 NDUFB10O96000 172 aa16.92■□□□□ 0.3
CCNL1-217ENST00000476367 HOXA7P31268 230 aaPredicted RBP16.92■□□□□ 0.3
CCNL1-217ENST00000476367 USP17L24Q0WX57 530 aa16.92■□□□□ 0.3
CCNL1-217ENST00000476367 KRT32Q14532 448 aa16.92■□□□□ 0.3
CCNL1-217ENST00000476367 SAMD1Q6SPF0 538 aaPredicted RBP16.92■□□□□ 0.3
CCNL1-217ENST00000476367 ANKS1AQ92625 1134 aa16.92■□□□□ 0.3
CCNL1-217ENST00000476367 ZSCAN10Q96SZ4 725 aaPredicted RBP16.92■□□□□ 0.3
CCNL1-217ENST00000476367 UPF3BQ9BZI7 483 aaKnown RBP16.92■□□□□ 0.3
CCNL1-217ENST00000476367 ISY1Q9ULR0 285 aaKnown RBP16.92■□□□□ 0.3
CCNL1-217ENST00000476367 TNKSO95271 1327 aa16.91■□□□□ 0.3
CCNL1-217ENST00000476367 A0A0G2JMZ2 1700 aa16.91■□□□□ 0.3
CCNL1-217ENST00000476367 F5H6K3 240 aa16.91■□□□□ 0.3
CCNL1-217ENST00000476367 PRC1O43663 620 aa16.91■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms