RNA–Protein interactions for RNA: ENST00000474852.1

TPR-205, Transcript of translocated promoter region, nuclear basket protein, humanhuman

TSL 1 (best)

Gene TPR, Length 2,757 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPR-205ENST00000474852 ABHD10Q9NUJ1 306 aa18.47■□□□□ 0.55
TPR-205ENST00000474852 AATFQ9NY61 560 aaKnown RBP eCLIP18.47■□□□□ 0.55
TPR-205ENST00000474852 CHD4Q14839 1912 aa18.47■□□□□ 0.55
TPR-205ENST00000474852 CCDC196A0A1B0GTZ2 297 aa18.47■□□□□ 0.55
TPR-205ENST00000474852 UQCRFS1P1P0C7P4 283 aa18.47■□□□□ 0.55
TPR-205ENST00000474852 USP5P45974 858 aa18.47■□□□□ 0.55
TPR-205ENST00000474852 SKIDA1Q1XH10 827 aa18.47■□□□□ 0.55
TPR-205ENST00000474852 ZNF512BQ96KM6 892 aaPredicted RBP18.47■□□□□ 0.55
TPR-205ENST00000474852 GDAP1L1Q96MZ0 367 aa18.47■□□□□ 0.55
TPR-205ENST00000474852 PLEKHA4Q9H4M7 779 aa18.47■□□□□ 0.55
TPR-205ENST00000474852 TMOD3Q9NYL9 352 aa18.47■□□□□ 0.55
TPR-205ENST00000474852 TTF2Q9UNY4 1162 aaKnown RBP18.47■□□□□ 0.55
TPR-205ENST00000474852 PUM3Q15397 648 aaKnown RBP18.47■□□□□ 0.55
TPR-205ENST00000474852 HSP90B2PQ58FF3 399 aa18.47■□□□□ 0.55
TPR-205ENST00000474852 GIGYF2Q6Y7W6 1299 aaKnown RBP18.47■□□□□ 0.55
TPR-205ENST00000474852 CHP1Q99653 195 aa18.47■□□□□ 0.55
TPR-205ENST00000474852 NACAP1Q9BZK3 213 aa18.47■□□□□ 0.55
TPR-205ENST00000474852 HDAC6Q9UBN7 1215 aa18.47■□□□□ 0.55
TPR-205ENST00000474852 RRP15Q9Y3B9 282 aaKnown RBP18.47■□□□□ 0.55
TPR-205ENST00000474852 V9GY48 417 aaPredicted RBP18.47■□□□□ 0.55
TPR-205ENST00000474852 LRRIQ3A6PVS8 624 aaPredicted RBP18.46■□□□□ 0.55
TPR-205ENST00000474852 ANKRD65E5RJM6 399 aa18.46■□□□□ 0.55
TPR-205ENST00000474852 POTEB2H3BUK9 544 aa18.46■□□□□ 0.55
TPR-205ENST00000474852 KRT9P35527 623 aa18.46■□□□□ 0.55
TPR-205ENST00000474852 PSD3Q9NYI0 1048 aa18.46■□□□□ 0.55
TPR-205ENST00000474852 TNKSO95271 1327 aa18.46■□□□□ 0.55
TPR-205ENST00000474852 PLEKHA8P1O95397 391 aa18.46■□□□□ 0.55
TPR-205ENST00000474852 ARHGAP25P42331 645 aa18.46■□□□□ 0.55
TPR-205ENST00000474852 SRLQ86TD4 932 aa18.46■□□□□ 0.55
TPR-205ENST00000474852 LPIN2Q92539 896 aa18.46■□□□□ 0.55
TPR-205ENST00000474852 KRT2P35908 639 aa18.45■□□□□ 0.54
TPR-205ENST00000474852 STAG1Q8WVM7 1258 aa18.45■□□□□ 0.54
TPR-205ENST00000474852 GSDMAQ96QA5 445 aa18.45■□□□□ 0.54
TPR-205ENST00000474852 SH3RF1Q7Z6J0 888 aa18.45■□□□□ 0.54
TPR-205ENST00000474852 TMTC1Q8IUR5 882 aa18.45■□□□□ 0.54
TPR-205ENST00000474852 MYO6Q9UM54 1294 aa18.45■□□□□ 0.54
TPR-205ENST00000474852 TNS3Q68CZ2 1445 aa18.45■□□□□ 0.54
TPR-205ENST00000474852 UBR2Q8IWV8 1755 aa18.45■□□□□ 0.54
TPR-205ENST00000474852 XDHP47989 1333 aa18.45■□□□□ 0.54
TPR-205ENST00000474852 ADAMTSL3P82987 1691 aa18.45■□□□□ 0.54
TPR-205ENST00000474852 BCAMP50895 628 aa18.44■□□□□ 0.54
TPR-205ENST00000474852 PTGDRQ13258 359 aa18.44■□□□□ 0.54
TPR-205ENST00000474852 MST1RQ04912 1400 aa18.44■□□□□ 0.54
TPR-205ENST00000474852 MYH6P13533 1939 aa18.44■□□□□ 0.54
TPR-205ENST00000474852 SRGAP2O75044 1071 aa18.44■□□□□ 0.54
TPR-205ENST00000474852 PKN1Q16512 942 aa18.44■□□□□ 0.54
TPR-205ENST00000474852 CYP26C1Q6V0L0 522 aa18.44■□□□□ 0.54
TPR-205ENST00000474852 CAPZA3Q96KX2 299 aa18.44■□□□□ 0.54
TPR-205ENST00000474852 LRP2BPQ9P2M1 347 aa18.44■□□□□ 0.54
TPR-205ENST00000474852 LRP6O75581 1613 aa18.44■□□□□ 0.54
TPR-205ENST00000474852 CYP2D7A0A087X1C5 515 aa18.43■□□□□ 0.54
TPR-205ENST00000474852 ZMYND10O75800 440 aa18.43■□□□□ 0.54
TPR-205ENST00000474852 IL2RBP14784 551 aa18.43■□□□□ 0.54
TPR-205ENST00000474852 XBP1P17861 261 aa18.43■□□□□ 0.54
TPR-205ENST00000474852 COPB1P53618 953 aaKnown RBP18.43■□□□□ 0.54
TPR-205ENST00000474852 PIP4K2BP78356 416 aa18.43■□□□□ 0.54
TPR-205ENST00000474852 IRX3P78415 501 aaPredicted RBP18.43■□□□□ 0.54
TPR-205ENST00000474852 PPARAQ07869 468 aa18.43■□□□□ 0.54
TPR-205ENST00000474852 PAXIP1Q6ZW49 1069 aaPredicted RBP18.43■□□□□ 0.54
TPR-205ENST00000474852 HINFPQ9BQA5 517 aa18.43■□□□□ 0.54
TPR-205ENST00000474852 WDR17Q8IZU2 1322 aa18.43■□□□□ 0.54
TPR-205ENST00000474852 UBXN1Q04323 297 aa18.43■□□□□ 0.54
TPR-205ENST00000474852 WHAMMP3Q1A5X7 153 aa18.43■□□□□ 0.54
TPR-205ENST00000474852 EEF2KMTQ96G04 330 aa18.43■□□□□ 0.54
TPR-205ENST00000474852 FAM204AQ9H8W3 233 aa18.43■□□□□ 0.54
TPR-205ENST00000474852 SLC5A1P13866 664 aa18.42■□□□□ 0.54
TPR-205ENST00000474852 ABCF2Q9UG63 623 aa18.42■□□□□ 0.54
TPR-205ENST00000474852 GDAQ9Y2T3 454 aa18.42■□□□□ 0.54
TPR-205ENST00000474852 CDHR2Q9BYE9 1310 aa18.42■□□□□ 0.54
TPR-205ENST00000474852 KCNJ18B7U540 433 aa18.42■□□□□ 0.54
TPR-205ENST00000474852 STARD3NLO95772 234 aa18.42■□□□□ 0.54
TPR-205ENST00000474852 KCNJ12Q14500 433 aa18.42■□□□□ 0.54
TPR-205ENST00000474852 TTC38Q5R3I4 469 aa18.42■□□□□ 0.54
TPR-205ENST00000474852 NELFBQ8WX92 580 aa18.42■□□□□ 0.54
TPR-205ENST00000474852 CCDC51Q96ER9 411 aa18.42■□□□□ 0.54
TPR-205ENST00000474852 RNF26Q9BY78 433 aaPredicted RBP18.42■□□□□ 0.54
TPR-205ENST00000474852 TRIM49BA6NDI0 452 aa18.42■□□□□ 0.54
TPR-205ENST00000474852 PAK1Q13153 545 aa18.42■□□□□ 0.54
TPR-205ENST00000474852 TMTC2Q8N394 836 aa18.42■□□□□ 0.54
TPR-205ENST00000474852 MTRQ99707 1265 aa18.42■□□□□ 0.54
TPR-205ENST00000474852 PHF20Q9BVI0 1012 aa18.42■□□□□ 0.54
TPR-205ENST00000474852 MCM7P33993 719 aa18.41■□□□□ 0.54
TPR-205ENST00000474852 TCP11X2Q5H9J9 407 aa18.41■□□□□ 0.54
TPR-205ENST00000474852 ADGRA1Q86SQ6 560 aa18.41■□□□□ 0.54
TPR-205ENST00000474852 ENAHQ8N8S7 591 aaPredicted RBP18.41■□□□□ 0.54
TPR-205ENST00000474852 RIN2Q8WYP3 895 aaPredicted RBP18.41■□□□□ 0.54
TPR-205ENST00000474852 REXO2Q9Y3B8 237 aaKnown RBP18.41■□□□□ 0.54
TPR-205ENST00000474852 EPN1Q9Y6I3 576 aaPredicted RBP18.41■□□□□ 0.54
TPR-205ENST00000474852 PARP4Q9UKK3 1724 aaKnown RBP18.41■□□□□ 0.54
TPR-205ENST00000474852 PDE8AO60658 829 aa18.41■□□□□ 0.54
TPR-205ENST00000474852 FGFR2P21802 821 aa18.41■□□□□ 0.54
TPR-205ENST00000474852 AMPD2Q01433 879 aa18.41■□□□□ 0.54
TPR-205ENST00000474852 GSPT2Q8IYD1 628 aaKnown RBP18.41■□□□□ 0.54
TPR-205ENST00000474852 PIGBQ92521 554 aa18.41■□□□□ 0.54
TPR-205ENST00000474852 GBP3Q9H0R5 595 aa18.41■□□□□ 0.54
TPR-205ENST00000474852 ITIH6Q6UXX5 1313 aa18.41■□□□□ 0.54
TPR-205ENST00000474852 NID2Q14112 1375 aa18.41■□□□□ 0.54
TPR-205ENST00000474852 NDUFA10O95299 355 aa18.4■□□□□ 0.54
TPR-205ENST00000474852 PIK3AP1Q6ZUJ8 805 aa18.4■□□□□ 0.54
TPR-205ENST00000474852 ANKRD20A12PQ8NF67 263 aa18.4■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms