RNA–Protein interactions for RNA: ENST00000474413.5

EFNA1-204, Transcript of ephrin A1, humanhuman

TSL 3

Gene EFNA1, Length 1,083 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFNA1-204ENST00000474413 MKI67P46013 3256 aaKnown RBP21.44■■□□□ 1.02
EFNA1-204ENST00000474413 USP17L15C9J2P7 530 aa21.43■■□□□ 1.02
EFNA1-204ENST00000474413 USP17L13C9JLJ4 530 aa21.43■■□□□ 1.02
EFNA1-204ENST00000474413 USP17L11C9JVI0 530 aa21.43■■□□□ 1.02
EFNA1-204ENST00000474413 USP17L18D6R9N7 530 aa21.43■■□□□ 1.02
EFNA1-204ENST00000474413 USP17L22D6RA61 530 aa21.43■■□□□ 1.02
EFNA1-204ENST00000474413 USP17L17D6RBQ6 530 aa21.43■■□□□ 1.02
EFNA1-204ENST00000474413 USP17L19D6RCP7 530 aa21.43■■□□□ 1.02
EFNA1-204ENST00000474413 USP17L20D6RJB6 530 aa21.43■■□□□ 1.02
EFNA1-204ENST00000474413 USP17L24Q0WX57 530 aa21.43■■□□□ 1.02
EFNA1-204ENST00000474413 SPICE1Q8N0Z3 855 aa21.43■■□□□ 1.02
EFNA1-204ENST00000474413 SH3TC2Q8TF17 1288 aa21.43■■□□□ 1.02
EFNA1-204ENST00000474413 KANSL2Q9H9L4 492 aa21.43■■□□□ 1.02
EFNA1-204ENST00000474413 FGAP02671 866 aa21.42■■□□□ 1.02
EFNA1-204ENST00000474413 RGS19P49795 217 aa21.42■■□□□ 1.02
EFNA1-204ENST00000474413 Q3C1V9 767 aa21.42■■□□□ 1.02
EFNA1-204ENST00000474413 LBX2Q6XYB7 198 aa21.42■■□□□ 1.02
EFNA1-204ENST00000474413 CEP95Q96GE4 821 aa21.42■■□□□ 1.02
EFNA1-204ENST00000474413 PORCNQ9H237 461 aa21.42■■□□□ 1.02
EFNA1-204ENST00000474413 MKNK2Q9HBH9 465 aa21.42■■□□□ 1.02
EFNA1-204ENST00000474413 ARHGEF10LQ9HCE6 1279 aa21.42■■□□□ 1.02
EFNA1-204ENST00000474413 BTBD7Q9P203 1132 aa21.42■■□□□ 1.02
EFNA1-204ENST00000474413 PRMT2P55345 433 aa21.41■■□□□ 1.02
EFNA1-204ENST00000474413 FAM47AQ5JRC9 791 aa21.41■■□□□ 1.02
EFNA1-204ENST00000474413 CWC27Q6UX04 472 aaKnown RBP21.41■■□□□ 1.02
EFNA1-204ENST00000474413 COL11A1P12107 1806 aaPredicted RBP21.41■■□□□ 1.02
EFNA1-204ENST00000474413 TNPO2O14787 897 aaKnown RBP21.4■■□□□ 1.02
EFNA1-204ENST00000474413 FGRP09769 529 aa21.4■■□□□ 1.02
EFNA1-204ENST00000474413 ERVK-9P63128 1117 aa21.4■■□□□ 1.02
EFNA1-204ENST00000474413 ERVK-24P63145 666 aa21.4■■□□□ 1.02
EFNA1-204ENST00000474413 ARHGEF6Q15052 776 aa21.4■■□□□ 1.02
EFNA1-204ENST00000474413 TBC1D10CQ8IV04 446 aa21.4■■□□□ 1.02
EFNA1-204ENST00000474413 LPAR1Q92633 364 aa21.4■■□□□ 1.02
EFNA1-204ENST00000474413 PAGR1Q9BTK6 254 aa21.4■■□□□ 1.02
EFNA1-204ENST00000474413 NYAP2Q9P242 653 aa21.4■■□□□ 1.02
EFNA1-204ENST00000474413 POTEFA5A3E0 1075 aa21.39■■□□□ 1.01
EFNA1-204ENST00000474413 FLT3LGP49771 235 aa21.39■■□□□ 1.01
EFNA1-204ENST00000474413 ATP2B2Q01814 1243 aa21.39■■□□□ 1.01
EFNA1-204ENST00000474413 SLC9C1Q4G0N8 1177 aa21.39■■□□□ 1.01
EFNA1-204ENST00000474413 NEDD1Q8NHV4 660 aa21.39■■□□□ 1.01
EFNA1-204ENST00000474413 DIAPH3Q9NSV4 1193 aa21.39■■□□□ 1.01
EFNA1-204ENST00000474413 FBXO28Q9NVF7 368 aa21.39■■□□□ 1.01
EFNA1-204ENST00000474413 MTMR4Q9NYA4 1195 aa21.39■■□□□ 1.01
EFNA1-204ENST00000474413 GJD2Q9UKL4 321 aa21.39■■□□□ 1.01
EFNA1-204ENST00000474413 GPRC5AQ8NFJ5 357 aa21.38■■□□□ 1.01
EFNA1-204ENST00000474413 NUP88Q99567 741 aaPredicted RBP21.38■■□□□ 1.01
EFNA1-204ENST00000474413 TANGO6Q9C0B7 1094 aa21.38■■□□□ 1.01
EFNA1-204ENST00000474413 SH2D4AQ9H788 454 aa21.38■■□□□ 1.01
EFNA1-204ENST00000474413 IL17RBQ9NRM6 502 aa21.38■■□□□ 1.01
EFNA1-204ENST00000474413 RABGAP1Q9Y3P9 1069 aa21.38■■□□□ 1.01
EFNA1-204ENST00000474413 ZNF236Q9UL36 1845 aa21.37■■□□□ 1.01
EFNA1-204ENST00000474413 WDR46O15213 610 aaKnown RBP21.37■■□□□ 1.01
EFNA1-204ENST00000474413 ORC4O43929 436 aa21.37■■□□□ 1.01
EFNA1-204ENST00000474413 NMT2O60551 498 aa21.37■■□□□ 1.01
EFNA1-204ENST00000474413 NDUFB10O96000 172 aa21.37■■□□□ 1.01
EFNA1-204ENST00000474413 HAND2P61296 217 aa21.37■■□□□ 1.01
EFNA1-204ENST00000474413 PDE4BQ07343 736 aa21.37■■□□□ 1.01
EFNA1-204ENST00000474413 IRF5Q13568 498 aa21.37■■□□□ 1.01
EFNA1-204ENST00000474413 LRRC47Q8N1G4 583 aaKnown RBP21.37■■□□□ 1.01
EFNA1-204ENST00000474413 GTF3C2Q8WUA4 911 aaPredicted RBP21.37■■□□□ 1.01
EFNA1-204ENST00000474413 ATG4CQ96DT6 458 aa21.37■■□□□ 1.01
EFNA1-204ENST00000474413 KIAA0100Q14667 2235 aaKnown RBP21.36■■□□□ 1.01
EFNA1-204ENST00000474413 ELNP15502 786 aa21.36■■□□□ 1.01
EFNA1-204ENST00000474413 NOVP48745 357 aa21.36■■□□□ 1.01
EFNA1-204ENST00000474413 TFAP4Q01664 338 aa21.36■■□□□ 1.01
EFNA1-204ENST00000474413 FAM83BQ5T0W9 1011 aa21.36■■□□□ 1.01
EFNA1-204ENST00000474413 CENPQQ7L2Z9 268 aaPredicted RBP21.36■■□□□ 1.01
EFNA1-204ENST00000474413 RASGRP2Q7LDG7 609 aa21.36■■□□□ 1.01
EFNA1-204ENST00000474413 ZNF444Q8N0Y2 327 aaPredicted RBP21.36■■□□□ 1.01
EFNA1-204ENST00000474413 RAET1EQ8TD07 263 aa21.36■■□□□ 1.01
EFNA1-204ENST00000474413 NEDD4P46934 1319 aa21.35■■□□□ 1.01
EFNA1-204ENST00000474413 HIP1O00291 1037 aa21.35■■□□□ 1.01
EFNA1-204ENST00000474413 CHMLP26374 656 aa21.35■■□□□ 1.01
EFNA1-204ENST00000474413 HOXD10P28358 340 aa21.35■■□□□ 1.01
EFNA1-204ENST00000474413 GRK4P32298 578 aa21.35■■□□□ 1.01
EFNA1-204ENST00000474413 DSG3P32926 999 aa21.35■■□□□ 1.01
EFNA1-204ENST00000474413 COG2Q14746 738 aa21.35■■□□□ 1.01
EFNA1-204ENST00000474413 MTFR1Q15390 333 aa21.35■■□□□ 1.01
EFNA1-204ENST00000474413 USP6NLQ92738 828 aa21.35■■□□□ 1.01
EFNA1-204ENST00000474413 MKL1Q969V6 931 aa21.35■■□□□ 1.01
EFNA1-204ENST00000474413 ZNF287Q9HBT7 754 aa21.35■■□□□ 1.01
EFNA1-204ENST00000474413 CLIP2Q9UDT6 1046 aa21.35■■□□□ 1.01
EFNA1-204ENST00000474413 F5H6K3 240 aa21.34■■□□□ 1.01
EFNA1-204ENST00000474413 FLOT1O75955 427 aa21.34■■□□□ 1.01
EFNA1-204ENST00000474413 SLC3A2P08195 630 aaKnown RBP21.34■■□□□ 1.01
EFNA1-204ENST00000474413 TSPY3P0CV98 308 aa21.34■■□□□ 1.01
EFNA1-204ENST00000474413 TSPY8P0CW00 308 aa21.34■■□□□ 1.01
EFNA1-204ENST00000474413 KLRC3Q07444 240 aa21.34■■□□□ 1.01
EFNA1-204ENST00000474413 GPR142Q7Z601 462 aa21.34■■□□□ 1.01
EFNA1-204ENST00000474413 REPS2Q8NFH8 660 aa21.34■■□□□ 1.01
EFNA1-204ENST00000474413 ADAMTS5Q9UNA0 930 aa21.34■■□□□ 1.01
EFNA1-204ENST00000474413 ADCY3O60266 1144 aa21.33■■□□□ 1.01
EFNA1-204ENST00000474413 TTLL1O95922 423 aa21.33■■□□□ 1.01
EFNA1-204ENST00000474413 MYCP01106 439 aaPredicted RBP21.33■■□□□ 1.01
EFNA1-204ENST00000474413 MORN1Q5T089 497 aa21.33■■□□□ 1.01
EFNA1-204ENST00000474413 SLAIN1Q8ND83 568 aa21.33■■□□□ 1.01
EFNA1-204ENST00000474413 STAG1Q8WVM7 1258 aa21.33■■□□□ 1.01
EFNA1-204ENST00000474413 COA7Q96BR5 231 aa21.33■■□□□ 1.01
EFNA1-204ENST00000474413 DSCC1Q9BVC3 393 aa21.33■■□□□ 1.01
EFNA1-204ENST00000474413 GOPCQ9HD26 462 aa21.33■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 61 ms