RNA–Protein interactions for RNA: ENST00000474020.5

ATPAF1-204, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2

Gene ATPAF1, Length 535 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-204ENST00000474020 MRE11P49959 708 aa7.06□□□□□ -1.28
ATPAF1-204ENST00000474020 CABP4P57796 275 aa7.06□□□□□ -1.28
ATPAF1-204ENST00000474020 HYAL2Q12891 473 aa7.06□□□□□ -1.28
ATPAF1-204ENST00000474020 NKAPLQ5M9Q1 402 aa7.06□□□□□ -1.28
ATPAF1-204ENST00000474020 TTC39BQ5VTQ0 682 aaPredicted RBP7.06□□□□□ -1.28
ATPAF1-204ENST00000474020 PDE12Q6L8Q7 609 aaKnown RBP7.06□□□□□ -1.28
ATPAF1-204ENST00000474020 ZNF790Q6PG37 636 aa7.06□□□□□ -1.28
ATPAF1-204ENST00000474020 TXNRD3Q86VQ6 643 aa7.06□□□□□ -1.28
ATPAF1-204ENST00000474020 CACTIN-AS1Q8N1I8 211 aa7.06□□□□□ -1.28
ATPAF1-204ENST00000474020 KIF2CQ99661 725 aa7.06□□□□□ -1.28
ATPAF1-204ENST00000474020 SEMA6BQ9H3T3 888 aa7.06□□□□□ -1.28
ATPAF1-204ENST00000474020 ABI2Q9NYB9 513 aaPredicted RBP7.06□□□□□ -1.28
ATPAF1-204ENST00000474020 CPDO75976 1380 aa7.06□□□□□ -1.28
ATPAF1-204ENST00000474020 PXDNQ92626 1479 aa7.05□□□□□ -1.28
ATPAF1-204ENST00000474020 PCDH11XQ9BZA7 1347 aa7.05□□□□□ -1.28
ATPAF1-204ENST00000474020 PCDH11YQ9BZA8 1340 aa7.05□□□□□ -1.28
ATPAF1-204ENST00000474020 GRM8O00222 908 aa7.05□□□□□ -1.28
ATPAF1-204ENST00000474020 RPLP1P05386 114 aaKnown RBP7.05□□□□□ -1.28
ATPAF1-204ENST00000474020 NBPF7P0C2Y1 421 aaPredicted RBP7.05□□□□□ -1.28
ATPAF1-204ENST00000474020 PHKG2P15735 406 aa7.05□□□□□ -1.28
ATPAF1-204ENST00000474020 DDIT3P35638 169 aa7.05□□□□□ -1.28
ATPAF1-204ENST00000474020 NEK4P51957 841 aa7.05□□□□□ -1.28
ATPAF1-204ENST00000474020 NOM1Q5C9Z4 860 aaKnown RBP7.05□□□□□ -1.28
ATPAF1-204ENST00000474020 LCE3BQ5TA77 95 aa7.05□□□□□ -1.28
ATPAF1-204ENST00000474020 GDF6Q6KF10 455 aaPredicted RBP7.05□□□□□ -1.28
ATPAF1-204ENST00000474020 ATCAYQ86WG3 371 aa7.05□□□□□ -1.28
ATPAF1-204ENST00000474020 EVI5LQ96CN4 794 aa7.05□□□□□ -1.28
ATPAF1-204ENST00000474020 IL1RAPL2Q9NP60 686 aa7.05□□□□□ -1.28
ATPAF1-204ENST00000474020 PRDM11Q9NQV5 511 aa7.05□□□□□ -1.28
ATPAF1-204ENST00000474020 ECHDC1Q9NTX5 307 aa7.05□□□□□ -1.28
ATPAF1-204ENST00000474020 USP21Q9UK80 565 aa7.05□□□□□ -1.28
ATPAF1-204ENST00000474020 ALS2Q96Q42 1657 aa7.05□□□□□ -1.28
ATPAF1-204ENST00000474020 ADCY9O60503 1353 aa7.05□□□□□ -1.28
ATPAF1-204ENST00000474020 HEG1Q9ULI3 1381 aa7.05□□□□□ -1.28
ATPAF1-204ENST00000474020 SPATA31A3Q5VYP0 1347 aa7.04□□□□□ -1.28
ATPAF1-204ENST00000474020 RAD50Q92878 1312 aa7.04□□□□□ -1.28
ATPAF1-204ENST00000474020 SALL3Q9BXA9 1300 aa7.04□□□□□ -1.28
ATPAF1-204ENST00000474020 USP42Q9H9J4 1324 aaKnown RBP7.04□□□□□ -1.28
ATPAF1-204ENST00000474020 KCNQ3O43525 872 aa7.04□□□□□ -1.28
ATPAF1-204ENST00000474020 DEAF1O75398 565 aaPredicted RBP7.04□□□□□ -1.28
ATPAF1-204ENST00000474020 KIF4AO95239 1232 aa7.04□□□□□ -1.28
ATPAF1-204ENST00000474020 ZKSCAN1P17029 563 aaPredicted RBP7.04□□□□□ -1.28
ATPAF1-204ENST00000474020 ITGB7P26010 798 aa7.04□□□□□ -1.28
ATPAF1-204ENST00000474020 AIMP1Q12904 312 aaKnown RBP7.04□□□□□ -1.28
ATPAF1-204ENST00000474020 COL13A1Q5TAT6 717 aaPredicted RBP7.04□□□□□ -1.28
ATPAF1-204ENST00000474020 IGF2-ASQ6U949 168 aa7.04□□□□□ -1.28
ATPAF1-204ENST00000474020 CLEC17AQ6ZS10 378 aa7.04□□□□□ -1.28
ATPAF1-204ENST00000474020 AACSQ86V21 672 aa7.04□□□□□ -1.28
ATPAF1-204ENST00000474020 GTF3C2Q8WUA4 911 aaPredicted RBP7.04□□□□□ -1.28
ATPAF1-204ENST00000474020 SYAP1Q96A49 352 aaPredicted RBP7.04□□□□□ -1.28
ATPAF1-204ENST00000474020 INTS4Q96HW7 963 aaKnown RBP7.04□□□□□ -1.28
ATPAF1-204ENST00000474020 SPACA7Q96KW9 195 aa7.04□□□□□ -1.28
ATPAF1-204ENST00000474020 GZF1Q9H116 711 aaPredicted RBP7.04□□□□□ -1.28
ATPAF1-204ENST00000474020 SRA1Q9HD15 236 aaKnown RBP7.04□□□□□ -1.28
ATPAF1-204ENST00000474020 PDIA4P13667 645 aaKnown RBP7.03□□□□□ -1.28
ATPAF1-204ENST00000474020 PCSK2P16519 638 aa7.03□□□□□ -1.28
ATPAF1-204ENST00000474020 MPSTP25325 297 aa7.03□□□□□ -1.28
ATPAF1-204ENST00000474020 EIF1AXP47813 144 aaKnown RBP7.03□□□□□ -1.28
ATPAF1-204ENST00000474020 KCNJ4P48050 445 aa7.03□□□□□ -1.28
ATPAF1-204ENST00000474020 XKR5Q6UX68 686 aa7.03□□□□□ -1.28
ATPAF1-204ENST00000474020 TOM1L2Q6ZVM7 507 aa7.03□□□□□ -1.28
ATPAF1-204ENST00000474020 ZNF438Q7Z4V0 828 aa7.03□□□□□ -1.28
ATPAF1-204ENST00000474020 IL22RA1Q8N6P7 574 aa7.03□□□□□ -1.28
ATPAF1-204ENST00000474020 XAGE3Q8WTP9 111 aa7.03□□□□□ -1.28
ATPAF1-204ENST00000474020 EDEM1Q92611 657 aa7.03□□□□□ -1.28
ATPAF1-204ENST00000474020 METTL22Q9BUU2 404 aaPredicted RBP7.03□□□□□ -1.28
ATPAF1-204ENST00000474020 ELP3Q9H9T3 547 aa7.03□□□□□ -1.28
ATPAF1-204ENST00000474020 TMEM63CQ9P1W3 806 aa7.03□□□□□ -1.28
ATPAF1-204ENST00000474020 TRIM33Q9UPN9 1127 aa7.03□□□□□ -1.28
ATPAF1-204ENST00000474020 ATP6V1DQ9Y5K8 247 aa7.03□□□□□ -1.28
ATPAF1-204ENST00000474020 DDX49Q9Y6V7 483 aaKnown RBP7.03□□□□□ -1.28
ATPAF1-204ENST00000474020 UTYO14607 1347 aa7.02□□□□□ -1.28
ATPAF1-204ENST00000474020 ERVV-2B6SEH9 535 aa7.02□□□□□ -1.29
ATPAF1-204ENST00000474020 DLL1O00548 723 aa7.02□□□□□ -1.29
ATPAF1-204ENST00000474020 SGSM2O43147 1006 aa7.02□□□□□ -1.29
ATPAF1-204ENST00000474020 DYRK3O43781 588 aa7.02□□□□□ -1.29
ATPAF1-204ENST00000474020 BAG4O95429 457 aaKnown RBP7.02□□□□□ -1.29
ATPAF1-204ENST00000474020 MBD3O95983 291 aa7.02□□□□□ -1.29
ATPAF1-204ENST00000474020 ANXA1P04083 346 aa7.02□□□□□ -1.29
ATPAF1-204ENST00000474020 PDGFAP04085 211 aa7.02□□□□□ -1.29
ATPAF1-204ENST00000474020 CYP2E1P05181 493 aaPredicted RBP7.02□□□□□ -1.29
ATPAF1-204ENST00000474020 MYL6BP14649 208 aa7.02□□□□□ -1.29
ATPAF1-204ENST00000474020 PSMA5P28066 241 aa7.02□□□□□ -1.29
ATPAF1-204ENST00000474020 HSPA4P34932 840 aa7.02□□□□□ -1.29
ATPAF1-204ENST00000474020 EVA1CP58658 441 aa7.02□□□□□ -1.29
ATPAF1-204ENST00000474020 DNM1Q05193 864 aaKnown RBP7.02□□□□□ -1.29
ATPAF1-204ENST00000474020 KLHL40Q2TBA0 621 aa7.02□□□□□ -1.29
ATPAF1-204ENST00000474020 TSHZ3Q63HK5 1081 aa7.02□□□□□ -1.29
ATPAF1-204ENST00000474020 ALKBH2Q6NS38 261 aa7.02□□□□□ -1.29
ATPAF1-204ENST00000474020 PHLDB3Q6NSJ2 640 aa7.02□□□□□ -1.29
ATPAF1-204ENST00000474020 MAP4K3Q8IVH8 894 aa7.02□□□□□ -1.29
ATPAF1-204ENST00000474020 Q8N3U1 123 aa7.02□□□□□ -1.29
ATPAF1-204ENST00000474020 PLBD2Q8NHP8 589 aa7.02□□□□□ -1.29
ATPAF1-204ENST00000474020 ZCRB1Q8TBF4 217 aaKnown RBP7.02□□□□□ -1.29
ATPAF1-204ENST00000474020 IL17RAQ96F46 866 aa7.02□□□□□ -1.29
ATPAF1-204ENST00000474020 ZSCAN31Q96LW9 406 aaPredicted RBP7.02□□□□□ -1.29
ATPAF1-204ENST00000474020 MYD88Q99836 296 aa7.02□□□□□ -1.29
ATPAF1-204ENST00000474020 MUC3BQ9H195 1237 aa7.02□□□□□ -1.29
ATPAF1-204ENST00000474020 MTMR7Q9Y216 660 aa7.02□□□□□ -1.29
ATPAF1-204ENST00000474020 ZSCAN21Q9Y5A6 473 aaPredicted RBP7.02□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 106.2 ms