RNA–Protein interactions for RNA: ENST00000473602.1

SHROOM3-204, Transcript of shroom family member 3, humanhuman

TSL 3

Gene SHROOM3, Length 789 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3-204ENST00000473602 MORF4L1Q9UBU8 362 aa15.53■□□□□ 0.08
SHROOM3-204ENST00000473602 PFASO15067 1338 aa15.52■□□□□ 0.08
SHROOM3-204ENST00000473602 USP17L12C9JPN9 530 aa15.52■□□□□ 0.08
SHROOM3-204ENST00000473602 USP17L21D6R901 530 aa15.52■□□□□ 0.08
SHROOM3-204ENST00000473602 GPAA1O43292 621 aa15.52■□□□□ 0.08
SHROOM3-204ENST00000473602 IRX3P78415 501 aaPredicted RBP15.52■□□□□ 0.08
SHROOM3-204ENST00000473602 NUCB1Q02818 461 aa15.52■□□□□ 0.08
SHROOM3-204ENST00000473602 EVI5LQ96CN4 794 aa15.52■□□□□ 0.08
SHROOM3-204ENST00000473602 P2RX7Q99572 595 aaKnown RBP15.52■□□□□ 0.08
SHROOM3-204ENST00000473602 NUDT12Q9BQG2 462 aa15.52■□□□□ 0.08
SHROOM3-204ENST00000473602 CYP2D6P10635 497 aa15.51■□□□□ 0.07
SHROOM3-204ENST00000473602 XRCC5P13010 732 aaKnown RBP15.51■□□□□ 0.07
SHROOM3-204ENST00000473602 SHROOM1Q2M3G4 852 aaPredicted RBP15.51■□□□□ 0.07
SHROOM3-204ENST00000473602 SBK1Q52WX2 424 aa15.51■□□□□ 0.07
SHROOM3-204ENST00000473602 ZMYM1Q5SVZ6 1142 aa15.51■□□□□ 0.07
SHROOM3-204ENST00000473602 GPRC5AQ8NFJ5 357 aa15.51■□□□□ 0.07
SHROOM3-204ENST00000473602 C12orf42Q96LP6 360 aa15.51■□□□□ 0.07
SHROOM3-204ENST00000473602 CCDC17Q96LX7 622 aa15.51■□□□□ 0.07
SHROOM3-204ENST00000473602 KIAA1683Q9H0B3 1180 aa15.51■□□□□ 0.07
SHROOM3-204ENST00000473602 TXNRD2Q9NNW7 524 aa15.51■□□□□ 0.07
SHROOM3-204ENST00000473602 ALPK3Q96L96 1907 aa15.51■□□□□ 0.07
SHROOM3-204ENST00000473602 LAMA2P24043 3122 aaKnown RBP15.5■□□□□ 0.07
SHROOM3-204ENST00000473602 GSG1L2A8MUP6 293 aa15.5■□□□□ 0.07
SHROOM3-204ENST00000473602 M0R2C6 588 aa15.5■□□□□ 0.07
SHROOM3-204ENST00000473602 HOXA7P31268 230 aaPredicted RBP15.5■□□□□ 0.07
SHROOM3-204ENST00000473602 USP14P54578 494 aa15.5■□□□□ 0.07
SHROOM3-204ENST00000473602 CACNB2Q08289 660 aaPredicted RBP15.5■□□□□ 0.07
SHROOM3-204ENST00000473602 RAB3GAP1Q15042 981 aa15.5■□□□□ 0.07
SHROOM3-204ENST00000473602 B4GALNT3Q6L9W6 998 aa15.5■□□□□ 0.07
SHROOM3-204ENST00000473602 CTR9Q6PD62 1173 aa15.5■□□□□ 0.07
SHROOM3-204ENST00000473602 USP17L2Q6R6M4 530 aa15.5■□□□□ 0.07
SHROOM3-204ENST00000473602 TMEM179Q6ZVK1 233 aa15.5■□□□□ 0.07
SHROOM3-204ENST00000473602 C16orf86Q6ZW13 317 aa15.5■□□□□ 0.07
SHROOM3-204ENST00000473602 FEZ1Q99689 392 aa15.5■□□□□ 0.07
SHROOM3-204ENST00000473602 OSBPL3Q9H4L5 887 aa15.5■□□□□ 0.07
SHROOM3-204ENST00000473602 ROBO3Q96MS0 1386 aa15.49■□□□□ 0.07
SHROOM3-204ENST00000473602 COL6A1P12109 1028 aa15.49■□□□□ 0.07
SHROOM3-204ENST00000473602 ZKSCAN1P17029 563 aaPredicted RBP15.49■□□□□ 0.07
SHROOM3-204ENST00000473602 HERVK_113P62684 666 aa15.49■□□□□ 0.07
SHROOM3-204ENST00000473602 MDM2Q00987 491 aaPredicted RBP15.49■□□□□ 0.07
SHROOM3-204ENST00000473602 EVX2Q03828 476 aa15.49■□□□□ 0.07
SHROOM3-204ENST00000473602 LRRC26Q2I0M4 334 aa15.49■□□□□ 0.07
SHROOM3-204ENST00000473602 Q3C1V9 767 aa15.49■□□□□ 0.07
SHROOM3-204ENST00000473602 LHX8Q68G74 356 aa15.49■□□□□ 0.07
SHROOM3-204ENST00000473602 SLC44A5Q8NCS7 719 aa15.49■□□□□ 0.07
SHROOM3-204ENST00000473602 SOCS4Q8WXH5 440 aa15.49■□□□□ 0.07
SHROOM3-204ENST00000473602 DYNLL2Q96FJ2 89 aa15.49■□□□□ 0.07
SHROOM3-204ENST00000473602 NACAP1Q9BZK3 213 aa15.49■□□□□ 0.07
SHROOM3-204ENST00000473602 RBPJLQ9UBG7 517 aa15.49■□□□□ 0.07
SHROOM3-204ENST00000473602 GREB1LQ9C091 1923 aaPredicted RBP15.49■□□□□ 0.07
SHROOM3-204ENST00000473602 CYP2D7A0A087X1C5 515 aa15.48■□□□□ 0.07
SHROOM3-204ENST00000473602 PATL2C9JE40 543 aaKnown RBP15.48■□□□□ 0.07
SHROOM3-204ENST00000473602 MPHOSPH10O00566 681 aaKnown RBP15.48■□□□□ 0.07
SHROOM3-204ENST00000473602 CCND3P30281 292 aaPredicted RBP15.48■□□□□ 0.07
SHROOM3-204ENST00000473602 MAPK4P31152 587 aa15.48■□□□□ 0.07
SHROOM3-204ENST00000473602 GUCY1A2P33402 732 aa15.48■□□□□ 0.07
SHROOM3-204ENST00000473602 TDO2P48775 406 aa15.48■□□□□ 0.07
SHROOM3-204ENST00000473602 CDK8P49336 464 aa15.48■□□□□ 0.07
SHROOM3-204ENST00000473602 SEPT2Q15019 361 aa15.48■□□□□ 0.07
SHROOM3-204ENST00000473602 CCAR1Q8IX12 1150 aaKnown RBP15.48■□□□□ 0.07
SHROOM3-204ENST00000473602 TRMT44Q8IYL2 757 aaKnown RBP15.48■□□□□ 0.07
SHROOM3-204ENST00000473602 USP6NLQ92738 828 aa15.48■□□□□ 0.07
SHROOM3-204ENST00000473602 COL25A1Q9BXS0 654 aaPredicted RBP15.48■□□□□ 0.07
SHROOM3-204ENST00000473602 EMILIN3Q9NT22 766 aa15.48■□□□□ 0.07
SHROOM3-204ENST00000473602 VCANP13611 3396 aa15.47■□□□□ 0.07
SHROOM3-204ENST00000473602 CCL14Q16627 93 aa15.47■□□□□ 0.07
SHROOM3-204ENST00000473602 PLEKHM2Q8IWE5 1019 aa15.47■□□□□ 0.07
SHROOM3-204ENST00000473602 GTF3C2Q8WUA4 911 aaPredicted RBP15.47■□□□□ 0.07
SHROOM3-204ENST00000473602 SEC62Q99442 399 aaKnown RBP15.47■□□□□ 0.07
SHROOM3-204ENST00000473602 PORCNQ9H237 461 aa15.47■□□□□ 0.07
SHROOM3-204ENST00000473602 ZNF287Q9HBT7 754 aa15.47■□□□□ 0.07
SHROOM3-204ENST00000473602 EPB41L4AQ9HCS5 686 aaPredicted RBP15.47■□□□□ 0.07
SHROOM3-204ENST00000473602 DNAH12Q6ZR08 3092 aa15.47■□□□□ 0.07
SHROOM3-204ENST00000473602 POTEB2H3BUK9 544 aa15.46■□□□□ 0.07
SHROOM3-204ENST00000473602 APPP05067 770 aa15.46■□□□□ 0.07
SHROOM3-204ENST00000473602 RGS2P41220 211 aa15.46■□□□□ 0.07
SHROOM3-204ENST00000473602 ERVK-9P63128 1117 aa15.46■□□□□ 0.07
SHROOM3-204ENST00000473602 ERVK-24P63145 666 aa15.46■□□□□ 0.07
SHROOM3-204ENST00000473602 IRX6P78412 446 aaPredicted RBP15.46■□□□□ 0.07
SHROOM3-204ENST00000473602 MORN1Q5T089 497 aa15.46■□□□□ 0.07
SHROOM3-204ENST00000473602 GPR142Q7Z601 462 aa15.46■□□□□ 0.07
SHROOM3-204ENST00000473602 IFNL3Q8IZI9 196 aa15.46■□□□□ 0.07
SHROOM3-204ENST00000473602 PAGR1Q9BTK6 254 aa15.46■□□□□ 0.07
SHROOM3-204ENST00000473602 SH2D4AQ9H788 454 aa15.46■□□□□ 0.07
SHROOM3-204ENST00000473602 ARHGEF10LQ9HCE6 1279 aa15.46■□□□□ 0.07
SHROOM3-204ENST00000473602 HELLSQ9NRZ9 838 aa15.46■□□□□ 0.07
SHROOM3-204ENST00000473602 MINDY4BA8MYZ0 360 aa15.45■□□□□ 0.06
SHROOM3-204ENST00000473602 TRIM6-TRIM34B2RNG4 842 aa15.45■□□□□ 0.06
SHROOM3-204ENST00000473602 USP17L15C9J2P7 530 aa15.45■□□□□ 0.06
SHROOM3-204ENST00000473602 USP17L13C9JLJ4 530 aa15.45■□□□□ 0.06
SHROOM3-204ENST00000473602 USP17L11C9JVI0 530 aa15.45■□□□□ 0.06
SHROOM3-204ENST00000473602 USP17L18D6R9N7 530 aa15.45■□□□□ 0.06
SHROOM3-204ENST00000473602 USP17L22D6RA61 530 aa15.45■□□□□ 0.06
SHROOM3-204ENST00000473602 USP17L17D6RBQ6 530 aa15.45■□□□□ 0.06
SHROOM3-204ENST00000473602 USP17L19D6RCP7 530 aa15.45■□□□□ 0.06
SHROOM3-204ENST00000473602 USP17L20D6RJB6 530 aa15.45■□□□□ 0.06
SHROOM3-204ENST00000473602 AKR1B1P15121 316 aa15.45■□□□□ 0.06
SHROOM3-204ENST00000473602 VCAM1P19320 739 aa15.45■□□□□ 0.06
SHROOM3-204ENST00000473602 ICA1Q05084 483 aa15.45■□□□□ 0.06
SHROOM3-204ENST00000473602 USP17L24Q0WX57 530 aa15.45■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms