RNA–Protein interactions for RNA: ENST00000472892.1

VTI1A-203, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 1 (best)

Gene VTI1A, Length 1,247 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-203ENST00000472892 C16orf86Q6ZW13 317 aa18.39■□□□□ 0.53
VTI1A-203ENST00000472892 AMOTL1Q8IY63 956 aa18.39■□□□□ 0.53
VTI1A-203ENST00000472892 KBTBD3Q8NAB2 608 aa18.39■□□□□ 0.53
VTI1A-203ENST00000472892 GPATCH3Q96I76 525 aa18.39■□□□□ 0.53
VTI1A-203ENST00000472892 STRBPQ96SI9 672 aaKnown RBP18.39■□□□□ 0.53
VTI1A-203ENST00000472892 COLQQ9Y215 455 aaPredicted RBP18.39■□□□□ 0.53
VTI1A-203ENST00000472892 GLRX3O76003 335 aaKnown RBP18.38■□□□□ 0.53
VTI1A-203ENST00000472892 KIAA1755Q5JYT7 1200 aa18.38■□□□□ 0.53
VTI1A-203ENST00000472892 ANKLE1Q8NAG6 615 aa18.38■□□□□ 0.53
VTI1A-203ENST00000472892 TMX2Q9Y320 296 aa18.38■□□□□ 0.53
VTI1A-203ENST00000472892 SLC15A5A6NIM6 579 aa18.37■□□□□ 0.53
VTI1A-203ENST00000472892 PRKAR2AP13861 404 aaKnown RBP18.37■□□□□ 0.53
VTI1A-203ENST00000472892 ZKSCAN1P17029 563 aaPredicted RBP18.37■□□□□ 0.53
VTI1A-203ENST00000472892 PTPREP23469 700 aa18.37■□□□□ 0.53
VTI1A-203ENST00000472892 MAP2K5Q13163 448 aa18.37■□□□□ 0.53
VTI1A-203ENST00000472892 TSHZ3Q63HK5 1081 aa18.37■□□□□ 0.53
VTI1A-203ENST00000472892 LPAR1Q92633 364 aa18.37■□□□□ 0.53
VTI1A-203ENST00000472892 PAWRQ96IZ0 340 aaKnown RBP18.37■□□□□ 0.53
VTI1A-203ENST00000472892 APBA2Q99767 749 aa18.37■□□□□ 0.53
VTI1A-203ENST00000472892 ARHGEF10LQ9HCE6 1279 aa18.37■□□□□ 0.53
VTI1A-203ENST00000472892 GSG1L2A8MUP6 293 aa18.36■□□□□ 0.53
VTI1A-203ENST00000472892 RNF113AO15541 343 aaKnown RBP18.36■□□□□ 0.53
VTI1A-203ENST00000472892 ZFYP08048 801 aaPredicted RBP18.36■□□□□ 0.53
VTI1A-203ENST00000472892 ICA1Q05084 483 aa18.36■□□□□ 0.53
VTI1A-203ENST00000472892 CACNB2Q08289 660 aaPredicted RBP18.36■□□□□ 0.53
VTI1A-203ENST00000472892 CCL14Q16627 93 aa18.36■□□□□ 0.53
VTI1A-203ENST00000472892 SBK1Q52WX2 424 aa18.36■□□□□ 0.53
VTI1A-203ENST00000472892 GIMAP6Q6P9H5 292 aa18.36■□□□□ 0.53
VTI1A-203ENST00000472892 NECAB2Q7Z6G3 386 aa18.36■□□□□ 0.53
VTI1A-203ENST00000472892 CLEC10AQ8IUN9 316 aa18.36■□□□□ 0.53
VTI1A-203ENST00000472892 APPBP2Q92624 585 aa18.36■□□□□ 0.53
VTI1A-203ENST00000472892 OSBP2Q969R2 916 aa18.36■□□□□ 0.53
VTI1A-203ENST00000472892 SH2D4AQ9H788 454 aa18.36■□□□□ 0.53
VTI1A-203ENST00000472892 CWC22Q9HCG8 908 aaKnown RBP18.36■□□□□ 0.53
VTI1A-203ENST00000472892 ARPP21Q9UBL0 812 aaPredicted RBP18.36■□□□□ 0.53
VTI1A-203ENST00000472892 OGDHLQ9ULD0 1010 aa18.36■□□□□ 0.53
VTI1A-203ENST00000472892 NR2E3Q9Y5X4 410 aa18.36■□□□□ 0.53
VTI1A-203ENST00000472892 TTC41PQ6P2S7 1318 aa18.35■□□□□ 0.53
VTI1A-203ENST00000472892 HOXC6P09630 235 aa18.35■□□□□ 0.53
VTI1A-203ENST00000472892 MNX1P50219 401 aaPredicted RBP18.35■□□□□ 0.53
VTI1A-203ENST00000472892 DIS3LQ8TF46 1054 aaKnown RBP18.35■□□□□ 0.53
VTI1A-203ENST00000472892 TANGO6Q9C0B7 1094 aa18.35■□□□□ 0.53
VTI1A-203ENST00000472892 VCPKMTQ9H867 229 aa18.35■□□□□ 0.53
VTI1A-203ENST00000472892 KANSL2Q9H9L4 492 aa18.35■□□□□ 0.53
VTI1A-203ENST00000472892 PCDH10Q9P2E7 1040 aa18.35■□□□□ 0.53
VTI1A-203ENST00000472892 MYH7P12883 1935 aa18.34■□□□□ 0.53
VTI1A-203ENST00000472892 BAZ2AQ9UIF9 1905 aaKnown RBP18.34■□□□□ 0.53
VTI1A-203ENST00000472892 EEF2P13639 858 aaKnown RBP18.34■□□□□ 0.53
VTI1A-203ENST00000472892 RRP1P56182 461 aaKnown RBP18.34■□□□□ 0.53
VTI1A-203ENST00000472892 GRB14Q14449 540 aa18.34■□□□□ 0.53
VTI1A-203ENST00000472892 WDR78Q5VTH9 848 aa18.34■□□□□ 0.53
VTI1A-203ENST00000472892 MOV10L1Q9BXT6 1211 aaKnown RBP18.34■□□□□ 0.53
VTI1A-203ENST00000472892 CEP290O15078 2479 aa18.33■□□□□ 0.53
VTI1A-203ENST00000472892 EVI5O60447 810 aa18.33■□□□□ 0.52
VTI1A-203ENST00000472892 FXR1P51114 621 aaKnown RBP eCLIP18.33■□□□□ 0.52
VTI1A-203ENST00000472892 SPICE1Q8N0Z3 855 aa18.33■□□□□ 0.52
VTI1A-203ENST00000472892 MB21D1Q8N884 522 aa18.33■□□□□ 0.52
VTI1A-203ENST00000472892 PI4K2BQ8TCG2 481 aa18.33■□□□□ 0.52
VTI1A-203ENST00000472892 GNL3Q9BVP2 549 aaKnown RBP eCLIP18.33■□□□□ 0.52
VTI1A-203ENST00000472892 NBPF3Q9H094 633 aa18.33■□□□□ 0.52
VTI1A-203ENST00000472892 SPATC1LQ9H0A9 340 aa18.33■□□□□ 0.52
VTI1A-203ENST00000472892 FLRT1Q9NZU1 646 aa18.33■□□□□ 0.52
VTI1A-203ENST00000472892 IVNS1ABPQ9Y6Y0 642 aa18.33■□□□□ 0.52
VTI1A-203ENST00000472892 ERC2O15083 957 aa18.32■□□□□ 0.52
VTI1A-203ENST00000472892 WDR46O15213 610 aaKnown RBP18.32■□□□□ 0.52
VTI1A-203ENST00000472892 GPAA1O43292 621 aa18.32■□□□□ 0.52
VTI1A-203ENST00000472892 STRNO43815 780 aa18.32■□□□□ 0.52
VTI1A-203ENST00000472892 FLOT1O75955 427 aa18.32■□□□□ 0.52
VTI1A-203ENST00000472892 IGHA2P01877 340 aa18.32■□□□□ 0.52
VTI1A-203ENST00000472892 GNAT2P19087 354 aa18.32■□□□□ 0.52
VTI1A-203ENST00000472892 CCND3P30281 292 aaPredicted RBP18.32■□□□□ 0.52
VTI1A-203ENST00000472892 LRRFIP1Q32MZ4 808 aaKnown RBP18.32■□□□□ 0.52
VTI1A-203ENST00000472892 LHX8Q68G74 356 aa18.32■□□□□ 0.52
VTI1A-203ENST00000472892 CHRDL2Q6WN34 429 aa18.32■□□□□ 0.52
VTI1A-203ENST00000472892 SHCBP1Q8NEM2 672 aa18.32■□□□□ 0.52
VTI1A-203ENST00000472892 OTUD7AQ8TE49 926 aaPredicted RBP18.32■□□□□ 0.52
VTI1A-203ENST00000472892 ADAMTS5Q9UNA0 930 aa18.32■□□□□ 0.52
VTI1A-203ENST00000472892 PATL2C9JE40 543 aaKnown RBP18.31■□□□□ 0.52
VTI1A-203ENST00000472892 RASA1P20936 1047 aa18.31■□□□□ 0.52
VTI1A-203ENST00000472892 MFSD14CQ5VZR4 134 aa18.31■□□□□ 0.52
VTI1A-203ENST00000472892 NPLOC4Q8TAT6 608 aa18.31■□□□□ 0.52
VTI1A-203ENST00000472892 PRO3102Q9H379 93 aa18.31■□□□□ 0.52
VTI1A-203ENST00000472892 RLFQ13129 1914 aa18.31■□□□□ 0.52
VTI1A-203ENST00000472892 MINDY4BA8MYZ0 360 aa18.3■□□□□ 0.52
VTI1A-203ENST00000472892 M0R2C6 588 aa18.3■□□□□ 0.52
VTI1A-203ENST00000472892 ERCC3P19447 782 aa18.3■□□□□ 0.52
VTI1A-203ENST00000472892 ATP2B2Q01814 1243 aa18.3■□□□□ 0.52
VTI1A-203ENST00000472892 ATG4CQ96DT6 458 aa18.3■□□□□ 0.52
VTI1A-203ENST00000472892 MROH8Q9H579 483 aa18.3■□□□□ 0.52
VTI1A-203ENST00000472892 C11orf49Q9H6J7 331 aa18.3■□□□□ 0.52
VTI1A-203ENST00000472892 EPB41L4AQ9HCS5 686 aaPredicted RBP18.3■□□□□ 0.52
VTI1A-203ENST00000472892 RBM27Q9P2N5 1060 aaKnown RBP18.3■□□□□ 0.52
VTI1A-203ENST00000472892 ROBO3Q96MS0 1386 aa18.3■□□□□ 0.52
VTI1A-203ENST00000472892 DPP9Q86TI2 863 aa18.29■□□□□ 0.52
VTI1A-203ENST00000472892 CRBNQ96SW2 442 aa18.29■□□□□ 0.52
VTI1A-203ENST00000472892 MKNK2Q9HBH9 465 aa18.29■□□□□ 0.52
VTI1A-203ENST00000472892 GOPCQ9HD26 462 aa18.29■□□□□ 0.52
VTI1A-203ENST00000472892 MYH8P13535 1937 aa18.29■□□□□ 0.52
VTI1A-203ENST00000472892 SALL3Q9BXA9 1300 aa18.28■□□□□ 0.52
VTI1A-203ENST00000472892 APPP05067 770 aa18.28■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms