RNA–Protein interactions for RNA: ENST00000471342.1

SF3A1-207, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 2

Gene SF3A1, Length 459 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-207ENST00000471342 PLEKHA8P1O95397 391 aa11.61□□□□□ -0.55
SF3A1-207ENST00000471342 SLC4A3P48751 1232 aa11.61□□□□□ -0.55
SF3A1-207ENST00000471342 RCAN1P53805 252 aa11.61□□□□□ -0.55
SF3A1-207ENST00000471342 ICA1Q05084 483 aa11.61□□□□□ -0.55
SF3A1-207ENST00000471342 KLRC3Q07444 240 aa11.61□□□□□ -0.55
SF3A1-207ENST00000471342 TRDNQ13061 729 aa11.61□□□□□ -0.55
SF3A1-207ENST00000471342 GRM4Q14833 912 aa11.61□□□□□ -0.55
SF3A1-207ENST00000471342 WTAPQ15007 396 aa11.61□□□□□ -0.55
SF3A1-207ENST00000471342 PKN1Q16512 942 aa11.61□□□□□ -0.55
SF3A1-207ENST00000471342 TTBK2Q6IQ55 1244 aa11.61□□□□□ -0.55
SF3A1-207ENST00000471342 SRBD1Q8N5C6 995 aaKnown RBP11.61□□□□□ -0.55
SF3A1-207ENST00000471342 PNMA1Q8ND90 353 aa11.61□□□□□ -0.55
SF3A1-207ENST00000471342 SMC1BQ8NDV3 1235 aa11.61□□□□□ -0.55
SF3A1-207ENST00000471342 IL27Q8NEV9 243 aa11.61□□□□□ -0.55
SF3A1-207ENST00000471342 GTF3C6Q969F1 213 aa11.61□□□□□ -0.55
SF3A1-207ENST00000471342 MAP3K14Q99558 947 aa11.61□□□□□ -0.55
SF3A1-207ENST00000471342 PTPN18Q99952 460 aa11.61□□□□□ -0.55
SF3A1-207ENST00000471342 CPVLQ9H3G5 476 aa11.61□□□□□ -0.55
SF3A1-207ENST00000471342 ZNF287Q9HBT7 754 aa11.61□□□□□ -0.55
SF3A1-207ENST00000471342 TOMM22Q9NS69 142 aa11.61□□□□□ -0.55
SF3A1-207ENST00000471342 TLL2Q9Y6L7 1015 aa11.61□□□□□ -0.55
SF3A1-207ENST00000471342 TESPA1A2RU30 521 aaPredicted RBP11.6□□□□□ -0.55
SF3A1-207ENST00000471342 BACE1P56817 501 aa11.6□□□□□ -0.55
SF3A1-207ENST00000471342 FSTL1Q12841 308 aa11.6□□□□□ -0.55
SF3A1-207ENST00000471342 SPP2Q13103 211 aa11.6□□□□□ -0.55
SF3A1-207ENST00000471342 RAB3GAP1Q15042 981 aa11.6□□□□□ -0.55
SF3A1-207ENST00000471342 IFIT1BQ5T764 474 aaKnown RBP11.6□□□□□ -0.55
SF3A1-207ENST00000471342 USP17L2Q6R6M4 530 aa11.6□□□□□ -0.55
SF3A1-207ENST00000471342 BTNL9Q6UXG8 535 aa11.6□□□□□ -0.55
SF3A1-207ENST00000471342 IQCA1Q86XH1 822 aa11.6□□□□□ -0.55
SF3A1-207ENST00000471342 AMOTL1Q8IY63 956 aa11.6□□□□□ -0.55
SF3A1-207ENST00000471342 ANKRD13AQ8IZ07 590 aa11.6□□□□□ -0.55
SF3A1-207ENST00000471342 FANCBQ8NB91 859 aa11.6□□□□□ -0.55
SF3A1-207ENST00000471342 NSUN7Q8NE18 718 aaKnown RBP11.6□□□□□ -0.55
SF3A1-207ENST00000471342 HOOK2Q96ED9 719 aa11.6□□□□□ -0.55
SF3A1-207ENST00000471342 GMCL1Q96IK5 515 aa11.6□□□□□ -0.55
SF3A1-207ENST00000471342 NUP88Q99567 741 aaPredicted RBP11.6□□□□□ -0.55
SF3A1-207ENST00000471342 VCPKMTQ9H867 229 aa11.6□□□□□ -0.55
SF3A1-207ENST00000471342 ELP3Q9H9T3 547 aa11.6□□□□□ -0.55
SF3A1-207ENST00000471342 ZHX2Q9Y6X8 837 aa11.6□□□□□ -0.55
SF3A1-207ENST00000471342 DOCK1Q14185 1865 aa11.59□□□□□ -0.55
SF3A1-207ENST00000471342 A0A0G2JLL6 359 aaPredicted RBP11.59□□□□□ -0.55
SF3A1-207ENST00000471342 K7ELQ4 463 aaPredicted RBP11.59□□□□□ -0.55
SF3A1-207ENST00000471342 PPP1R12BO60237 982 aaPredicted RBP11.59□□□□□ -0.55
SF3A1-207ENST00000471342 JAK2O60674 1132 aa11.59□□□□□ -0.55
SF3A1-207ENST00000471342 PPP1R11O60927 126 aaPredicted RBP11.59□□□□□ -0.55
SF3A1-207ENST00000471342 DDAH1O94760 285 aa11.59□□□□□ -0.55
SF3A1-207ENST00000471342 PPATQ06203 517 aa11.59□□□□□ -0.55
SF3A1-207ENST00000471342 ZNF543Q08ER8 600 aa11.59□□□□□ -0.55
SF3A1-207ENST00000471342 TMTC3Q6ZXV5 915 aa11.59□□□□□ -0.55
SF3A1-207ENST00000471342 PRRT2Q7Z6L0 340 aaPredicted RBP11.59□□□□□ -0.55
SF3A1-207ENST00000471342 RASAL3Q86YV0 1011 aa11.59□□□□□ -0.55
SF3A1-207ENST00000471342 CMTR1Q8N1G2 835 aaKnown RBP11.59□□□□□ -0.55
SF3A1-207ENST00000471342 TMTC2Q8N394 836 aa11.59□□□□□ -0.55
SF3A1-207ENST00000471342 ZNF280CQ8ND82 737 aa11.59□□□□□ -0.55
SF3A1-207ENST00000471342 WNK4Q96J92 1243 aa11.59□□□□□ -0.55
SF3A1-207ENST00000471342 UBAC1Q9BSL1 405 aa11.59□□□□□ -0.55
SF3A1-207ENST00000471342 RIOX1Q9H6W3 641 aa11.59□□□□□ -0.55
SF3A1-207ENST00000471342 ADAMTS5Q9UNA0 930 aa11.59□□□□□ -0.55
SF3A1-207ENST00000471342 STX8Q9UNK0 236 aa11.59□□□□□ -0.55
SF3A1-207ENST00000471342 RLFQ13129 1914 aa11.58□□□□□ -0.55
SF3A1-207ENST00000471342 MPHOSPH10O00566 681 aaKnown RBP11.58□□□□□ -0.56
SF3A1-207ENST00000471342 GOLGA8HP0CJ92 632 aa11.58□□□□□ -0.56
SF3A1-207ENST00000471342 IREB2P48200 963 aaKnown RBP11.58□□□□□ -0.56
SF3A1-207ENST00000471342 CCT2P78371 535 aaKnown RBP11.58□□□□□ -0.56
SF3A1-207ENST00000471342 PPIL2Q13356 520 aa11.58□□□□□ -0.56
SF3A1-207ENST00000471342 NPY5RQ15761 445 aa11.58□□□□□ -0.56
SF3A1-207ENST00000471342 CCDC178Q5BJE1 867 aa11.58□□□□□ -0.56
SF3A1-207ENST00000471342 SPRYD7Q5W111 196 aa11.58□□□□□ -0.56
SF3A1-207ENST00000471342 TYW1BQ6NUM6 668 aa11.58□□□□□ -0.56
SF3A1-207ENST00000471342 NOL8Q76FK4 1167 aaKnown RBP11.58□□□□□ -0.56
SF3A1-207ENST00000471342 ARMC9Q7Z3E5 817 aa11.58□□□□□ -0.56
SF3A1-207ENST00000471342 ERO1BQ86YB8 467 aa11.58□□□□□ -0.56
SF3A1-207ENST00000471342 REPS2Q8NFH8 660 aa11.58□□□□□ -0.56
SF3A1-207ENST00000471342 OPTNQ96CV9 577 aa11.58□□□□□ -0.56
SF3A1-207ENST00000471342 R3HDMLQ9H3Y0 253 aa11.58□□□□□ -0.56
SF3A1-207ENST00000471342 CNTNAP5Q8WYK1 1306 aa11.58□□□□□ -0.56
SF3A1-207ENST00000471342 CXCL11O14625 94 aa11.57□□□□□ -0.56
SF3A1-207ENST00000471342 PLA2G6O60733 806 aa11.57□□□□□ -0.56
SF3A1-207ENST00000471342 IFNAR1P17181 557 aa11.57□□□□□ -0.56
SF3A1-207ENST00000471342 VCAM1P19320 739 aa11.57□□□□□ -0.56
SF3A1-207ENST00000471342 STK3Q13188 491 aa11.57□□□□□ -0.56
SF3A1-207ENST00000471342 MTMR2Q13614 643 aa11.57□□□□□ -0.56
SF3A1-207ENST00000471342 ANKRD1Q15327 319 aa11.57□□□□□ -0.56
SF3A1-207ENST00000471342 TREML2Q5T2D2 321 aa11.57□□□□□ -0.56
SF3A1-207ENST00000471342 SLFN13Q68D06 897 aa11.57□□□□□ -0.56
SF3A1-207ENST00000471342 CCDC83Q8IWF9 413 aa11.57□□□□□ -0.56
SF3A1-207ENST00000471342 CCDC144CPQ8IYA2 1237 aa11.57□□□□□ -0.56
SF3A1-207ENST00000471342 BRI3BPQ8WY22 251 aa11.57□□□□□ -0.56
SF3A1-207ENST00000471342 HHIPL1Q96JK4 782 aa11.57□□□□□ -0.56
SF3A1-207ENST00000471342 AIFM3Q96NN9 605 aa11.57□□□□□ -0.56
SF3A1-207ENST00000471342 UBA5Q9GZZ9 404 aa11.57□□□□□ -0.56
SF3A1-207ENST00000471342 ZNF408Q9H9D4 720 aa11.57□□□□□ -0.56
SF3A1-207ENST00000471342 CABP5Q9NP86 173 aa11.57□□□□□ -0.56
SF3A1-207ENST00000471342 FBXO28Q9NVF7 368 aa11.57□□□□□ -0.56
SF3A1-207ENST00000471342 ZDHHC9Q9Y397 364 aa11.57□□□□□ -0.56
SF3A1-207ENST00000471342 SLC12A7Q9Y666 1083 aa11.57□□□□□ -0.56
SF3A1-207ENST00000471342 ATAD5Q96QE3 1844 aa11.57□□□□□ -0.56
SF3A1-207ENST00000471342 ZNF536O15090 1300 aa11.57□□□□□ -0.56
SF3A1-207ENST00000471342 TRIM75PA6NK02 468 aa11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms