RNA–Protein interactions for RNA: ENST00000470086.5

LSM2-210, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM2, Length 713 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2-210ENST00000470086 FAM163AQ96GL9 167 aaPredicted RBP10.27□□□□□ -0.77
LSM2-210ENST00000470086 EMILIN3Q9NT22 766 aa10.27□□□□□ -0.77
LSM2-210ENST00000470086 C9orf78Q9NZ63 289 aaPredicted RBP10.27□□□□□ -0.77
LSM2-210ENST00000470086 SIP14410 1827 aa10.26□□□□□ -0.77
LSM2-210ENST00000470086 CLTBP09497 229 aa10.26□□□□□ -0.77
LSM2-210ENST00000470086 PTPREP23469 700 aa10.26□□□□□ -0.77
LSM2-210ENST00000470086 ZEB1P37275 1124 aaPredicted RBP10.26□□□□□ -0.77
LSM2-210ENST00000470086 CALD1Q05682 793 aaKnown RBP10.26□□□□□ -0.77
LSM2-210ENST00000470086 EXOSC9Q06265 439 aaKnown RBP10.26□□□□□ -0.77
LSM2-210ENST00000470086 RASIP1Q5U651 963 aa10.26□□□□□ -0.77
LSM2-210ENST00000470086 KRT40Q6A162 431 aa10.26□□□□□ -0.77
LSM2-210ENST00000470086 SLC4A10Q6U841 1118 aa10.26□□□□□ -0.77
LSM2-210ENST00000470086 WWC1Q8IX03 1113 aa10.26□□□□□ -0.77
LSM2-210ENST00000470086 TRMT44Q8IYL2 757 aaKnown RBP10.26□□□□□ -0.77
LSM2-210ENST00000470086 NKX2-4Q9H2Z4 354 aa10.26□□□□□ -0.77
LSM2-210ENST00000470086 HCN4Q9Y3Q4 1203 aa10.26□□□□□ -0.77
LSM2-210ENST00000470086 KIAA0355O15063 1070 aa10.25□□□□□ -0.77
LSM2-210ENST00000470086 ST18O60284 1047 aa10.25□□□□□ -0.77
LSM2-210ENST00000470086 PQBP1O60828 265 aaKnown RBP10.25□□□□□ -0.77
LSM2-210ENST00000470086 HOXC6P09630 235 aa10.25□□□□□ -0.77
LSM2-210ENST00000470086 IFIT1P09914 478 aaKnown RBP10.25□□□□□ -0.77
LSM2-210ENST00000470086 SLC5A1P13866 664 aa10.25□□□□□ -0.77
LSM2-210ENST00000470086 HOXB3P14651 431 aaPredicted RBP10.25□□□□□ -0.77
LSM2-210ENST00000470086 MECOMQ03112 1051 aa10.25□□□□□ -0.77
LSM2-210ENST00000470086 FPGSQ05932 587 aa10.25□□□□□ -0.77
LSM2-210ENST00000470086 FAAP100Q0VG06 881 aa10.25□□□□□ -0.77
LSM2-210ENST00000470086 PABPC4Q13310 644 aaKnown RBP eCLIP10.25□□□□□ -0.772e-7■■■■□ 25.3
LSM2-210ENST00000470086 ZYXQ15942 572 aaKnown RBP10.25□□□□□ -0.77
LSM2-210ENST00000470086 MICALL1Q8N3F8 863 aa10.25□□□□□ -0.77
LSM2-210ENST00000470086 LPIN2Q92539 896 aa10.25□□□□□ -0.77
LSM2-210ENST00000470086 EDC3Q96F86 508 aaKnown RBP10.25□□□□□ -0.77
LSM2-210ENST00000470086 GAS2L1Q99501 681 aaPredicted RBP10.25□□□□□ -0.77
LSM2-210ENST00000470086 WDR18Q9BV38 432 aa10.25□□□□□ -0.77
LSM2-210ENST00000470086 C1QTNF1Q9BXJ1 281 aa10.25□□□□□ -0.77
LSM2-210ENST00000470086 SIL1Q9H173 461 aa10.25□□□□□ -0.77
LSM2-210ENST00000470086 CXXC1Q9P0U4 656 aaPredicted RBP10.25□□□□□ -0.77
LSM2-210ENST00000470086 BAZ2AQ9UIF9 1905 aaKnown RBP10.25□□□□□ -0.77
LSM2-210ENST00000470086 PLXNA3P51805 1871 aa10.24□□□□□ -0.77
LSM2-210ENST00000470086 HSFX4A0A1B0GTS1 333 aaPredicted RBP10.24□□□□□ -0.77
LSM2-210ENST00000470086 HSFX3A0A1B0GWH4 333 aaPredicted RBP10.24□□□□□ -0.77
LSM2-210ENST00000470086 A0A1W2PQ45 241 aaPredicted RBP10.24□□□□□ -0.77
LSM2-210ENST00000470086 A0A1W2PQY0 241 aa10.24□□□□□ -0.77
LSM2-210ENST00000470086 EPOPA6NHQ4 379 aa10.24□□□□□ -0.77
LSM2-210ENST00000470086 KBTBD13C9JR72 458 aa10.24□□□□□ -0.77
LSM2-210ENST00000470086 EYA2O00167 538 aa10.24□□□□□ -0.77
LSM2-210ENST00000470086 COBLO75128 1261 aa10.24□□□□□ -0.77
LSM2-210ENST00000470086 ALDH1L1O75891 902 aa10.24□□□□□ -0.77
LSM2-210ENST00000470086 ARHGEF15O94989 841 aa10.24□□□□□ -0.77
LSM2-210ENST00000470086 ACRP10323 421 aa10.24□□□□□ -0.77
LSM2-210ENST00000470086 MYOGP15173 224 aa10.24□□□□□ -0.77
LSM2-210ENST00000470086 IGFBP4P22692 258 aa10.24□□□□□ -0.77
LSM2-210ENST00000470086 MRE11P49959 708 aa10.24□□□□□ -0.77
LSM2-210ENST00000470086 ATP2B3Q16720 1220 aa10.24□□□□□ -0.77
LSM2-210ENST00000470086 TMEM240Q5SV17 173 aa10.24□□□□□ -0.77
LSM2-210ENST00000470086 WDR78Q5VTH9 848 aa10.24□□□□□ -0.77
LSM2-210ENST00000470086 C1orf53Q5VUE5 145 aa10.24□□□□□ -0.77
LSM2-210ENST00000470086 MFSD14CQ5VZR4 134 aa10.24□□□□□ -0.77
LSM2-210ENST00000470086 SPRED2Q7Z698 418 aa10.24□□□□□ -0.77
LSM2-210ENST00000470086 SRCIN1Q9C0H9 1055 aa10.24□□□□□ -0.77
LSM2-210ENST00000470086 ZBTB21Q9ULJ3 1066 aa10.24□□□□□ -0.77
LSM2-210ENST00000470086 ARIH1Q9Y4X5 557 aaPredicted RBP10.24□□□□□ -0.77
LSM2-210ENST00000470086 GPR75-ASB3A0A0A6YYF3 556 aa10.23□□□□□ -0.77
LSM2-210ENST00000470086 MYADML2A6NDP7 307 aa10.23□□□□□ -0.77
LSM2-210ENST00000470086 SPDYE16A6NNV3 312 aaPredicted RBP10.23□□□□□ -0.77
LSM2-210ENST00000470086 RFXAPO00287 272 aa10.23□□□□□ -0.77
LSM2-210ENST00000470086 PGK1P00558 417 aa10.23□□□□□ -0.77
LSM2-210ENST00000470086 RAG1P15918 1043 aa10.23□□□□□ -0.77
LSM2-210ENST00000470086 TAL1P17542 331 aaPredicted RBP10.23□□□□□ -0.77
LSM2-210ENST00000470086 DZIP1Q86YF9 867 aaKnown RBP10.23□□□□□ -0.77
LSM2-210ENST00000470086 TET1Q8NFU7 2136 aa10.23□□□□□ -0.77
LSM2-210ENST00000470086 SH3RF3Q8TEJ3 882 aaPredicted RBP10.23□□□□□ -0.77
LSM2-210ENST00000470086 PHOX2BQ99453 314 aa10.23□□□□□ -0.77
LSM2-210ENST00000470086 ABCF2Q9UG63 623 aa10.23□□□□□ -0.77
LSM2-210ENST00000470086 TBX21Q9UL17 535 aa10.23□□□□□ -0.77
LSM2-210ENST00000470086 PHF24Q9UPV7 400 aa10.23□□□□□ -0.77
LSM2-210ENST00000470086 ZFHX4Q86UP3 3567 aa10.23□□□□□ -0.77
LSM2-210ENST00000470086 C2orf72A6NCS6 295 aa10.22□□□□□ -0.77
LSM2-210ENST00000470086 SLC15A5A6NIM6 579 aa10.22□□□□□ -0.77
LSM2-210ENST00000470086 SEPT4O43236 478 aa10.22□□□□□ -0.77
LSM2-210ENST00000470086 MSCO60682 206 aa10.22□□□□□ -0.77
LSM2-210ENST00000470086 ADORA2AP29274 412 aa10.22□□□□□ -0.77
LSM2-210ENST00000470086 TMEM31Q5JXX7 168 aa10.22□□□□□ -0.77
LSM2-210ENST00000470086 CCDC102BQ68D86 513 aa10.22□□□□□ -0.77
LSM2-210ENST00000470086 TBC1D9Q6ZT07 1266 aa10.22□□□□□ -0.77
LSM2-210ENST00000470086 ADGRA1Q86SQ6 560 aa10.22□□□□□ -0.77
LSM2-210ENST00000470086 VWCEQ96DN2 955 aa10.22□□□□□ -0.77
LSM2-210ENST00000470086 PA2G4Q9UQ80 394 aaKnown RBP10.22□□□□□ -0.77
LSM2-210ENST00000470086 GREB1LQ9C091 1923 aaPredicted RBP10.22□□□□□ -0.77
LSM2-210ENST00000470086 UMODL1Q5DID0 1318 aa10.22□□□□□ -0.77
LSM2-210ENST00000470086 ROBO3Q96MS0 1386 aa10.22□□□□□ -0.77
LSM2-210ENST00000470086 ADCY6O43306 1168 aa10.21□□□□□ -0.77
LSM2-210ENST00000470086 CSF2RAP15509 400 aa10.21□□□□□ -0.77
LSM2-210ENST00000470086 VCAM1P19320 739 aa10.21□□□□□ -0.77
LSM2-210ENST00000470086 RABGGTBP53611 331 aa10.21□□□□□ -0.77
LSM2-210ENST00000470086 ATP2B2Q01814 1243 aa10.21□□□□□ -0.77
LSM2-210ENST00000470086 CCDC129Q6ZRS4 1044 aa10.21□□□□□ -0.77
LSM2-210ENST00000470086 NSUN4Q96CB9 384 aaKnown RBP10.21□□□□□ -0.77
LSM2-210ENST00000470086 TBC1D2Q9BYX2 928 aa10.21□□□□□ -0.77
LSM2-210ENST00000470086 AS3MTQ9HBK9 375 aa10.21□□□□□ -0.77
LSM2-210ENST00000470086 TMOD4Q9NZQ9 345 aa10.21□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms