RNA–Protein interactions for RNA: ENST00000466635.1

SYP-203, Transcript of synaptophysin, humanhuman

TSL 4

Gene SYP, Length 513 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYP-203ENST00000466635 BRI3BPQ8WY22 251 aa15.81■□□□□ 0.12
SYP-203ENST00000466635 LPAR1Q92633 364 aa15.81■□□□□ 0.12
SYP-203ENST00000466635 TMEM87BQ96K49 555 aa15.81■□□□□ 0.12
SYP-203ENST00000466635 ZIC5Q96T25 663 aa15.81■□□□□ 0.12
SYP-203ENST00000466635 VCPKMTQ9H867 229 aa15.81■□□□□ 0.12
SYP-203ENST00000466635 EMILIN3Q9NT22 766 aa15.81■□□□□ 0.12
SYP-203ENST00000466635 WDR19Q8NEZ3 1342 aa15.8■□□□□ 0.12
SYP-203ENST00000466635 NOVP48745 357 aa15.8■□□□□ 0.12
SYP-203ENST00000466635 MAP2K1Q02750 393 aaPredicted RBP15.8■□□□□ 0.12
SYP-203ENST00000466635 TMEM67Q5HYA8 995 aa15.8■□□□□ 0.12
SYP-203ENST00000466635 IFIT1BQ5T764 474 aaKnown RBP15.8■□□□□ 0.12
SYP-203ENST00000466635 CHST3Q7LGC8 479 aa15.8■□□□□ 0.12
SYP-203ENST00000466635 ANKRD23Q86SG2 305 aa15.8■□□□□ 0.12
SYP-203ENST00000466635 LRRC47Q8N1G4 583 aaKnown RBP15.8■□□□□ 0.12
SYP-203ENST00000466635 TMTC2Q8N394 836 aa15.8■□□□□ 0.12
SYP-203ENST00000466635 ENAHQ8N8S7 591 aaPredicted RBP15.8■□□□□ 0.12
SYP-203ENST00000466635 ANKS1AQ92625 1134 aa15.8■□□□□ 0.12
SYP-203ENST00000466635 C12orf42Q96LP6 360 aa15.8■□□□□ 0.12
SYP-203ENST00000466635 C22orf23Q9BZE7 217 aa15.8■□□□□ 0.12
SYP-203ENST00000466635 TM6SF1Q9BZW5 370 aa15.8■□□□□ 0.12
SYP-203ENST00000466635 KAT14Q9H8E8 782 aa15.8■□□□□ 0.12
SYP-203ENST00000466635 F5H6K3 240 aa15.79■□□□□ 0.12
SYP-203ENST00000466635 ALDH1A1P00352 501 aa15.79■□□□□ 0.12
SYP-203ENST00000466635 CASTP20810 708 aaKnown RBP15.79■□□□□ 0.12
SYP-203ENST00000466635 ANTXR2P58335 489 aa15.79■□□□□ 0.12
SYP-203ENST00000466635 FGD1P98174 961 aa15.79■□□□□ 0.12
SYP-203ENST00000466635 KLRC3Q07444 240 aa15.79■□□□□ 0.12
SYP-203ENST00000466635 WTAPQ15007 396 aa15.79■□□□□ 0.12
SYP-203ENST00000466635 RCSD1Q6JBY9 416 aa15.79■□□□□ 0.12
SYP-203ENST00000466635 IFNL1Q8IU54 200 aa15.79■□□□□ 0.12
SYP-203ENST00000466635 GMCL1P1Q8NEA9 526 aa15.79■□□□□ 0.12
SYP-203ENST00000466635 TMEM47Q9BQJ4 181 aa15.79■□□□□ 0.12
SYP-203ENST00000466635 AGTPBP1Q9UPW5 1226 aa15.79■□□□□ 0.12
SYP-203ENST00000466635 CYP46A1Q9Y6A2 500 aa15.79■□□□□ 0.12
SYP-203ENST00000466635 BTBD19C9JJ37 291 aa15.78■□□□□ 0.12
SYP-203ENST00000466635 RPS6KB1P23443 525 aa15.78■□□□□ 0.12
SYP-203ENST00000466635 EXOSC10Q01780 885 aaKnown RBP15.78■□□□□ 0.12
SYP-203ENST00000466635 MOGSQ13724 837 aa15.78■□□□□ 0.12
SYP-203ENST00000466635 SLFN13Q68D06 897 aa15.78■□□□□ 0.12
SYP-203ENST00000466635 SPICE1Q8N0Z3 855 aa15.78■□□□□ 0.12
SYP-203ENST00000466635 IGDCC4Q8TDY8 1250 aa15.78■□□□□ 0.12
SYP-203ENST00000466635 BEGAINQ9BUH8 593 aa15.78■□□□□ 0.12
SYP-203ENST00000466635 ZSWIM6Q9HCJ5 1215 aa15.78■□□□□ 0.12
SYP-203ENST00000466635 ZCCHC17Q9NP64 241 aaKnown RBP15.78■□□□□ 0.12
SYP-203ENST00000466635 SLC45A1Q9Y2W3 748 aa15.78■□□□□ 0.12
SYP-203ENST00000466635 MYH8P13535 1937 aa15.77■□□□□ 0.12
SYP-203ENST00000466635 USP17L15C9J2P7 530 aa15.77■□□□□ 0.12
SYP-203ENST00000466635 USP17L13C9JLJ4 530 aa15.77■□□□□ 0.12
SYP-203ENST00000466635 USP17L11C9JVI0 530 aa15.77■□□□□ 0.12
SYP-203ENST00000466635 USP17L18D6R9N7 530 aa15.77■□□□□ 0.12
SYP-203ENST00000466635 USP17L22D6RA61 530 aa15.77■□□□□ 0.12
SYP-203ENST00000466635 USP17L17D6RBQ6 530 aa15.77■□□□□ 0.12
SYP-203ENST00000466635 USP17L19D6RCP7 530 aa15.77■□□□□ 0.12
SYP-203ENST00000466635 USP17L20D6RJB6 530 aa15.77■□□□□ 0.12
SYP-203ENST00000466635 PDHXO00330 501 aa15.77■□□□□ 0.12
SYP-203ENST00000466635 WDR46O15213 610 aaKnown RBP15.77■□□□□ 0.12
SYP-203ENST00000466635 NDUFB10O96000 172 aa15.77■□□□□ 0.12
SYP-203ENST00000466635 VCAM1P19320 739 aa15.77■□□□□ 0.12
SYP-203ENST00000466635 OSBPP22059 807 aa15.77■□□□□ 0.12
SYP-203ENST00000466635 USP17L24Q0WX57 530 aa15.77■□□□□ 0.12
SYP-203ENST00000466635 DGKZQ13574 1117 aa15.77■□□□□ 0.12
SYP-203ENST00000466635 SEC23AQ15436 765 aa15.77■□□□□ 0.12
SYP-203ENST00000466635 TREML2Q5T2D2 321 aa15.77■□□□□ 0.12
SYP-203ENST00000466635 GPAT2Q6NUI2 795 aa15.77■□□□□ 0.12
SYP-203ENST00000466635 NFXL1Q6ZNB6 911 aa15.77■□□□□ 0.12
SYP-203ENST00000466635 RUFY3Q7L099 469 aa15.77■□□□□ 0.12
SYP-203ENST00000466635 PNMA1Q8ND90 353 aa15.77■□□□□ 0.12
SYP-203ENST00000466635 PTPN18Q99952 460 aa15.77■□□□□ 0.12
SYP-203ENST00000466635 PNMA3Q9UL41 463 aa15.77■□□□□ 0.12
SYP-203ENST00000466635 ATAD5Q96QE3 1844 aa15.77■□□□□ 0.11
SYP-203ENST00000466635 CCDC69A6NI79 296 aa15.76■□□□□ 0.11
SYP-203ENST00000466635 IGF2BP3O00425 579 aaKnown RBP eCLIP15.76■□□□□ 0.11
SYP-203ENST00000466635 SH2B2O14492 632 aaPredicted RBP15.76■□□□□ 0.11
SYP-203ENST00000466635 HOXA7P31268 230 aaPredicted RBP15.76■□□□□ 0.11
SYP-203ENST00000466635 LIFRP42702 1097 aa15.76■□□□□ 0.11
SYP-203ENST00000466635 SLC1A4P43007 532 aa15.76■□□□□ 0.11
SYP-203ENST00000466635 RBM25P49756 843 aaKnown RBP15.76■□□□□ 0.11
SYP-203ENST00000466635 IRX3P78415 501 aaPredicted RBP15.76■□□□□ 0.11
SYP-203ENST00000466635 CATIPQ7Z7H3 387 aa15.76■□□□□ 0.11
SYP-203ENST00000466635 FAM43AQ8N2R8 423 aa15.76■□□□□ 0.11
SYP-203ENST00000466635 DCAF4Q8WV16 495 aa15.76■□□□□ 0.11
SYP-203ENST00000466635 IL17RAQ96F46 866 aa15.76■□□□□ 0.11
SYP-203ENST00000466635 GMCL1Q96IK5 515 aa15.76■□□□□ 0.11
SYP-203ENST00000466635 TANGO6Q9C0B7 1094 aa15.76■□□□□ 0.11
SYP-203ENST00000466635 RPAP3Q9H6T3 665 aaPredicted RBP15.76■□□□□ 0.11
SYP-203ENST00000466635 ISY1Q9ULR0 285 aaKnown RBP15.76■□□□□ 0.11
SYP-203ENST00000466635 MTMR7Q9Y216 660 aa15.76■□□□□ 0.11
SYP-203ENST00000466635 GREB1LQ9C091 1923 aaPredicted RBP15.75■□□□□ 0.11
SYP-203ENST00000466635 BMP3P12645 472 aa15.75■□□□□ 0.11
SYP-203ENST00000466635 CPA1P15085 419 aa15.75■□□□□ 0.11
SYP-203ENST00000466635 KIAA1755Q5JYT7 1200 aa15.75■□□□□ 0.11
SYP-203ENST00000466635 FAM83BQ5T0W9 1011 aa15.75■□□□□ 0.11
SYP-203ENST00000466635 SYNE3Q6ZMZ3 975 aa15.75■□□□□ 0.11
SYP-203ENST00000466635 PARK7Q99497 189 aaKnown RBP15.75■□□□□ 0.11
SYP-203ENST00000466635 LRRC2Q9BYS8 371 aa15.75■□□□□ 0.11
SYP-203ENST00000466635 LY9Q9HBG7 655 aa15.75■□□□□ 0.11
SYP-203ENST00000466635 CA12O43570 354 aa15.74■□□□□ 0.11
SYP-203ENST00000466635 COL9A3Q14050 684 aaPredicted RBP15.74■□□□□ 0.11
SYP-203ENST00000466635 TAF1CQ15572 869 aaPredicted RBP15.74■□□□□ 0.11
SYP-203ENST00000466635 CCDC96Q2M329 555 aa15.74■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms