RNA–Protein interactions for RNA: ENST00000466260.1

RTFDC1-205, Transcript of Protein RTF2 homolog, humanhuman

TSL 3

Gene RTFDC1, Length 616 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-205ENST00000466260 SOX10P56693 466 aa11.59□□□□□ -0.55
RTFDC1-205ENST00000466260 HAND2P61296 217 aa11.59□□□□□ -0.55
RTFDC1-205ENST00000466260 FAM47AQ5JRC9 791 aa11.59□□□□□ -0.55
RTFDC1-205ENST00000466260 ZNF444Q8N0Y2 327 aaPredicted RBP11.59□□□□□ -0.55
RTFDC1-205ENST00000466260 SPICE1Q8N0Z3 855 aa11.59□□□□□ -0.55
RTFDC1-205ENST00000466260 CCDC17Q96LX7 622 aa11.59□□□□□ -0.55
RTFDC1-205ENST00000466260 KIAA1683Q9H0B3 1180 aa11.59□□□□□ -0.55
RTFDC1-205ENST00000466260 RPAP3Q9H6T3 665 aaPredicted RBP11.59□□□□□ -0.55
RTFDC1-205ENST00000466260 INCENPQ9NQS7 918 aa11.59□□□□□ -0.55
RTFDC1-205ENST00000466260 TAOK2Q9UL54 1235 aa11.59□□□□□ -0.55
RTFDC1-205ENST00000466260 PTPN22Q9Y2R2 807 aa11.59□□□□□ -0.55
RTFDC1-205ENST00000466260 PTCH2Q9Y6C5 1203 aa11.59□□□□□ -0.55
RTFDC1-205ENST00000466260 RLFQ13129 1914 aa11.58□□□□□ -0.55
RTFDC1-205ENST00000466260 SLC3A2P08195 630 aaKnown RBP11.58□□□□□ -0.56
RTFDC1-205ENST00000466260 HSPD1P10809 573 aaKnown RBP11.58□□□□□ -0.56
RTFDC1-205ENST00000466260 EEF2P13639 858 aaKnown RBP11.58□□□□□ -0.56
RTFDC1-205ENST00000466260 HERVK_113P62684 666 aa11.58□□□□□ -0.56
RTFDC1-205ENST00000466260 PDE4BQ07343 736 aa11.58□□□□□ -0.56
RTFDC1-205ENST00000466260 ARHGEF6Q15052 776 aa11.58□□□□□ -0.56
RTFDC1-205ENST00000466260 PKN2Q16513 984 aaKnown RBP11.58□□□□□ -0.56
RTFDC1-205ENST00000466260 RRP12Q5JTH9 1297 aaKnown RBP11.58□□□□□ -0.56
RTFDC1-205ENST00000466260 CHMP4CQ96CF2 233 aa11.58□□□□□ -0.56
RTFDC1-205ENST00000466260 CCDC136Q96JN2 1154 aa11.58□□□□□ -0.56
RTFDC1-205ENST00000466260 TRIM47Q96LD4 638 aa11.58□□□□□ -0.56
RTFDC1-205ENST00000466260 P2RX7Q99572 595 aaKnown RBP11.58□□□□□ -0.56
RTFDC1-205ENST00000466260 TANGO6Q9C0B7 1094 aa11.58□□□□□ -0.56
RTFDC1-205ENST00000466260 MYPNQ86TC9 1320 aa11.58□□□□□ -0.56
RTFDC1-205ENST00000466260 A0A0G2JMZ2 1700 aa11.57□□□□□ -0.56
RTFDC1-205ENST00000466260 USP17L15C9J2P7 530 aa11.57□□□□□ -0.56
RTFDC1-205ENST00000466260 USP17L13C9JLJ4 530 aa11.57□□□□□ -0.56
RTFDC1-205ENST00000466260 USP17L11C9JVI0 530 aa11.57□□□□□ -0.56
RTFDC1-205ENST00000466260 USP17L18D6R9N7 530 aa11.57□□□□□ -0.56
RTFDC1-205ENST00000466260 USP17L22D6RA61 530 aa11.57□□□□□ -0.56
RTFDC1-205ENST00000466260 USP17L17D6RBQ6 530 aa11.57□□□□□ -0.56
RTFDC1-205ENST00000466260 USP17L19D6RCP7 530 aa11.57□□□□□ -0.56
RTFDC1-205ENST00000466260 USP17L20D6RJB6 530 aa11.57□□□□□ -0.56
RTFDC1-205ENST00000466260 HIP1O00291 1037 aa11.57□□□□□ -0.56
RTFDC1-205ENST00000466260 TNPO2O14787 897 aaKnown RBP11.57□□□□□ -0.56
RTFDC1-205ENST00000466260 TSPY3P0CV98 308 aa11.57□□□□□ -0.56
RTFDC1-205ENST00000466260 TSPY8P0CW00 308 aa11.57□□□□□ -0.56
RTFDC1-205ENST00000466260 FCGRTP55899 365 aa11.57□□□□□ -0.56
RTFDC1-205ENST00000466260 USP17L24Q0WX57 530 aa11.57□□□□□ -0.56
RTFDC1-205ENST00000466260 KIAA1755Q5JYT7 1200 aa11.57□□□□□ -0.56
RTFDC1-205ENST00000466260 CENPQQ7L2Z9 268 aaPredicted RBP11.57□□□□□ -0.56
RTFDC1-205ENST00000466260 LRRC47Q8N1G4 583 aaKnown RBP11.57□□□□□ -0.56
RTFDC1-205ENST00000466260 C12orf42Q96LP6 360 aa11.57□□□□□ -0.56
RTFDC1-205ENST00000466260 SH2D4AQ9H788 454 aa11.57□□□□□ -0.56
RTFDC1-205ENST00000466260 ZNF287Q9HBT7 754 aa11.57□□□□□ -0.56
RTFDC1-205ENST00000466260 CWC22Q9HCG8 908 aaKnown RBP11.57□□□□□ -0.56
RTFDC1-205ENST00000466260 ISY1Q9ULR0 285 aaKnown RBP11.57□□□□□ -0.56
RTFDC1-205ENST00000466260 TSPY2A6NKD2 308 aa11.56□□□□□ -0.56
RTFDC1-205ENST00000466260 RANBP6O60518 1105 aaKnown RBP11.56□□□□□ -0.56
RTFDC1-205ENST00000466260 FGAP02671 866 aa11.56□□□□□ -0.56
RTFDC1-205ENST00000466260 HOXA7P31268 230 aaPredicted RBP11.56□□□□□ -0.56
RTFDC1-205ENST00000466260 GCLCP48506 637 aaPredicted RBP11.56□□□□□ -0.56
RTFDC1-205ENST00000466260 MFAP1P55081 439 aaKnown RBP11.56□□□□□ -0.56
RTFDC1-205ENST00000466260 TFAP4Q01664 338 aa11.56□□□□□ -0.56
RTFDC1-205ENST00000466260 PRKCZQ05513 592 aa11.56□□□□□ -0.56
RTFDC1-205ENST00000466260 FAM110CQ1W6H9 321 aa11.56□□□□□ -0.56
RTFDC1-205ENST00000466260 WDR78Q5VTH9 848 aa11.56□□□□□ -0.56
RTFDC1-205ENST00000466260 SIAH1Q8IUQ4 282 aa11.56□□□□□ -0.56
RTFDC1-205ENST00000466260 RAET1EQ8TD07 263 aa11.56□□□□□ -0.56
RTFDC1-205ENST00000466260 SH3TC2Q8TF17 1288 aa11.56□□□□□ -0.56
RTFDC1-205ENST00000466260 CEP95Q96GE4 821 aa11.56□□□□□ -0.56
RTFDC1-205ENST00000466260 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.56□□□□□ -0.56
RTFDC1-205ENST00000466260 IL25Q9H293 177 aa11.56□□□□□ -0.56
RTFDC1-205ENST00000466260 KANSL2Q9H9L4 492 aa11.56□□□□□ -0.56
RTFDC1-205ENST00000466260 TXNRD2Q9NNW7 524 aa11.56□□□□□ -0.56
RTFDC1-205ENST00000466260 GABRQQ9UN88 632 aa11.56□□□□□ -0.56
RTFDC1-205ENST00000466260 MTMR7Q9Y216 660 aa11.56□□□□□ -0.56
RTFDC1-205ENST00000466260 TMX2Q9Y320 296 aa11.56□□□□□ -0.56
RTFDC1-205ENST00000466260 PYGBP11216 843 aa11.55□□□□□ -0.56
RTFDC1-205ENST00000466260 HOXD10P28358 340 aa11.55□□□□□ -0.56
RTFDC1-205ENST00000466260 SLC9C1Q4G0N8 1177 aa11.55□□□□□ -0.56
RTFDC1-205ENST00000466260 CATSPERGQ6ZRH7 1159 aa11.55□□□□□ -0.56
RTFDC1-205ENST00000466260 CCAR1Q8IX12 1150 aaKnown RBP11.55□□□□□ -0.56
RTFDC1-205ENST00000466260 NUP88Q99567 741 aaPredicted RBP11.55□□□□□ -0.56
RTFDC1-205ENST00000466260 VCPKMTQ9H867 229 aa11.55□□□□□ -0.56
RTFDC1-205ENST00000466260 GOPCQ9HD26 462 aa11.55□□□□□ -0.56
RTFDC1-205ENST00000466260 CLIP2Q9UDT6 1046 aa11.55□□□□□ -0.56
RTFDC1-205ENST00000466260 SRRDQ9UH36 339 aa11.55□□□□□ -0.56
RTFDC1-205ENST00000466260 TACC3Q9Y6A5 838 aa11.55□□□□□ -0.56
RTFDC1-205ENST00000466260 RBBP6Q7Z6E9 1792 aaKnown RBP11.54□□□□□ -0.56
RTFDC1-205ENST00000466260 SPDYE16A6NNV3 312 aaPredicted RBP11.54□□□□□ -0.56
RTFDC1-205ENST00000466260 FLOT1O75955 427 aa11.54□□□□□ -0.56
RTFDC1-205ENST00000466260 ERVK-9P63128 1117 aa11.54□□□□□ -0.56
RTFDC1-205ENST00000466260 ERVK-24P63145 666 aa11.54□□□□□ -0.56
RTFDC1-205ENST00000466260 PLS1Q14651 629 aa11.54□□□□□ -0.56
RTFDC1-205ENST00000466260 FAM83BQ5T0W9 1011 aa11.54□□□□□ -0.56
RTFDC1-205ENST00000466260 TBC1D10CQ8IV04 446 aa11.54□□□□□ -0.56
RTFDC1-205ENST00000466260 COA7Q96BR5 231 aa11.54□□□□□ -0.56
RTFDC1-205ENST00000466260 STX8Q9UNK0 236 aa11.54□□□□□ -0.56
RTFDC1-205ENST00000466260 DDX52Q9Y2R4 599 aaKnown RBP eCLIP11.54□□□□□ -0.56
RTFDC1-205ENST00000466260 ZNFX1Q9P2E3 1918 aaKnown RBP11.54□□□□□ -0.56
RTFDC1-205ENST00000466260 ZNF213O14771 459 aa11.53□□□□□ -0.56
RTFDC1-205ENST00000466260 WDR46O15213 610 aaKnown RBP11.53□□□□□ -0.56
RTFDC1-205ENST00000466260 NMT2O60551 498 aa11.53□□□□□ -0.56
RTFDC1-205ENST00000466260 FLT3LGP49771 235 aa11.53□□□□□ -0.56
RTFDC1-205ENST00000466260 ALX1Q15699 326 aa11.53□□□□□ -0.56
RTFDC1-205ENST00000466260 Q3C1V9 767 aa11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 76.8 ms