RNA–Protein interactions for RNA: ENST00000465741.1

SPTA1-203, Transcript of spectrin alpha, erythrocytic 1, humanhuman

TSL 3

Gene SPTA1, Length 718 nt, Biotype retained intron, Subcellular localisation Cytosol, Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1-203ENST00000465741 KCNK4Q9NYG8 393 aa9.1□□□□□ -0.95
SPTA1-203ENST00000465741 SNCAIPQ9Y6H5 919 aa9.1□□□□□ -0.95
SPTA1-203ENST00000465741 LRPPRCP42704 1394 aaKnown RBP9.1□□□□□ -0.95
SPTA1-203ENST00000465741 ABCC11Q96J66 1382 aa9.1□□□□□ -0.95
SPTA1-203ENST00000465741 ADAMTS13Q76LX8 1427 aa9.09□□□□□ -0.95
SPTA1-203ENST00000465741 YTHDC2Q9H6S0 1430 aaKnown RBP9.09□□□□□ -0.95
SPTA1-203ENST00000465741 FAM229AH3BQW9 127 aa9.09□□□□□ -0.95
SPTA1-203ENST00000465741 CTSBP07858 339 aa9.09□□□□□ -0.95
SPTA1-203ENST00000465741 LIG1P18858 919 aa9.09□□□□□ -0.95
SPTA1-203ENST00000465741 ACAD11Q709F0 780 aa9.09□□□□□ -0.95
SPTA1-203ENST00000465741 HDXQ7Z353 690 aa9.09□□□□□ -0.95
SPTA1-203ENST00000465741 RNF208Q9H0X6 261 aa9.09□□□□□ -0.95
SPTA1-203ENST00000465741 STRIP2Q9ULQ0 834 aa9.09□□□□□ -0.95
SPTA1-203ENST00000465741 KIF1BO60333 1816 aa9.09□□□□□ -0.95
SPTA1-203ENST00000465741 MEGF11A6BM72 1044 aa9.08□□□□□ -0.96
SPTA1-203ENST00000465741 TLR3O15455 904 aaKnown RBP9.08□□□□□ -0.96
SPTA1-203ENST00000465741 ZNF862O60290 1169 aa9.08□□□□□ -0.96
SPTA1-203ENST00000465741 ZNF165P49910 485 aa9.08□□□□□ -0.96
SPTA1-203ENST00000465741 SEZ6Q53EL9 994 aa9.08□□□□□ -0.96
SPTA1-203ENST00000465741 MPRIPQ6WCQ1 1025 aa9.08□□□□□ -0.96
SPTA1-203ENST00000465741 REC114Q7Z4M0 266 aa9.08□□□□□ -0.96
SPTA1-203ENST00000465741 UBXN4Q92575 508 aa9.08□□□□□ -0.96
SPTA1-203ENST00000465741 ELMO3Q96BJ8 720 aa9.08□□□□□ -0.96
SPTA1-203ENST00000465741 ARMC5Q96C12 935 aa9.08□□□□□ -0.96
SPTA1-203ENST00000465741 NACC1Q96RE7 527 aa9.08□□□□□ -0.96
SPTA1-203ENST00000465741 CYP4F12Q9HCS2 524 aa9.08□□□□□ -0.96
SPTA1-203ENST00000465741 EFR3BQ9Y2G0 817 aa9.08□□□□□ -0.96
SPTA1-203ENST00000465741 SLIT1O75093 1534 aa9.08□□□□□ -0.96
SPTA1-203ENST00000465741 ALKQ9UM73 1620 aa9.07□□□□□ -0.96
SPTA1-203ENST00000465741 AOC2O75106 756 aa9.07□□□□□ -0.96
SPTA1-203ENST00000465741 SSBP05455 408 aaKnown RBP eCLIP9.07□□□□□ -0.96
SPTA1-203ENST00000465741 KCNA6P17658 529 aa9.07□□□□□ -0.96
SPTA1-203ENST00000465741 MCM4P33991 863 aa9.07□□□□□ -0.96
SPTA1-203ENST00000465741 CRKP46108 304 aa9.07□□□□□ -0.96
SPTA1-203ENST00000465741 SOX9P48436 509 aa9.07□□□□□ -0.96
SPTA1-203ENST00000465741 NASPP49321 788 aaPredicted RBP9.07□□□□□ -0.96
SPTA1-203ENST00000465741 PTPN11Q06124 597 aaPredicted RBP9.07□□□□□ -0.96
SPTA1-203ENST00000465741 LCE3BQ5TA77 95 aa9.07□□□□□ -0.96
SPTA1-203ENST00000465741 NUTM2GQ5VZR2 741 aa9.07□□□□□ -0.96
SPTA1-203ENST00000465741 WDR18Q9BV38 432 aa9.07□□□□□ -0.96
SPTA1-203ENST00000465741 TMPRSS13Q9BYE2 586 aa9.07□□□□□ -0.96
SPTA1-203ENST00000465741 GINM1Q9NU53 330 aa9.07□□□□□ -0.96
SPTA1-203ENST00000465741 DISP3Q9P2K9 1392 aa9.07□□□□□ -0.96
SPTA1-203ENST00000465741 DYRK3O43781 588 aa9.06□□□□□ -0.96
SPTA1-203ENST00000465741 FGRP09769 529 aa9.06□□□□□ -0.96
SPTA1-203ENST00000465741 WIPI1Q5MNZ9 446 aaPredicted RBP9.06□□□□□ -0.96
SPTA1-203ENST00000465741 ZC3HAV1Q7Z2W4 902 aaKnown RBP9.06□□□□□ -0.96
SPTA1-203ENST00000465741 REXO1Q8N1G1 1221 aaKnown RBP9.06□□□□□ -0.96
SPTA1-203ENST00000465741 FBXO27Q8NI29 283 aa9.06□□□□□ -0.96
SPTA1-203ENST00000465741 CDK19Q9BWU1 502 aa9.06□□□□□ -0.96
SPTA1-203ENST00000465741 PPP1R1BQ9UD71 204 aaPredicted RBP9.06□□□□□ -0.96
SPTA1-203ENST00000465741 TACC3Q9Y6A5 838 aa9.06□□□□□ -0.96
SPTA1-203ENST00000465741 PLEKHH1Q9ULM0 1364 aa9.06□□□□□ -0.96
SPTA1-203ENST00000465741 ADGRB1O14514 1584 aa9.06□□□□□ -0.96
SPTA1-203ENST00000465741 CEP170BQ9Y4F5 1589 aaPredicted RBP9.06□□□□□ -0.96
SPTA1-203ENST00000465741 EVC2Q86UK5 1308 aa9.05□□□□□ -0.96
SPTA1-203ENST00000465741 NPHP4O75161 1426 aaPredicted RBP9.05□□□□□ -0.96
SPTA1-203ENST00000465741 TRPM1Q7Z4N2 1603 aa9.05□□□□□ -0.96
SPTA1-203ENST00000465741 MED14O60244 1454 aa9.05□□□□□ -0.96
SPTA1-203ENST00000465741 WISP1O95388 367 aa9.05□□□□□ -0.96
SPTA1-203ENST00000465741 DLGAP3O95886 979 aa9.05□□□□□ -0.96
SPTA1-203ENST00000465741 APBA3O96018 575 aa9.05□□□□□ -0.96
SPTA1-203ENST00000465741 ID3Q02535 119 aa9.05□□□□□ -0.96
SPTA1-203ENST00000465741 PDZRN4Q6ZMN7 1036 aaPredicted RBP9.05□□□□□ -0.96
SPTA1-203ENST00000465741 KIAA1211Q6ZU35 1233 aa9.05□□□□□ -0.96
SPTA1-203ENST00000465741 TMEM130Q8N3G9 435 aa9.05□□□□□ -0.96
SPTA1-203ENST00000465741 CPLX3Q8WVH0 158 aa9.05□□□□□ -0.96
SPTA1-203ENST00000465741 WDR89Q96FK6 387 aaPredicted RBP9.05□□□□□ -0.96
SPTA1-203ENST00000465741 PLPPR2Q96GM1 343 aa9.05□□□□□ -0.96
SPTA1-203ENST00000465741 PANK3Q9H999 370 aa9.05□□□□□ -0.96
SPTA1-203ENST00000465741 SUGCTQ9HAC7 445 aa9.05□□□□□ -0.96
SPTA1-203ENST00000465741 PTPRUQ92729 1446 aa9.05□□□□□ -0.96
SPTA1-203ENST00000465741 C9orf172C9J069 976 aa9.04□□□□□ -0.96
SPTA1-203ENST00000465741 IMPDH2P12268 514 aa9.04□□□□□ -0.96
SPTA1-203ENST00000465741 NRG1Q02297 640 aaPredicted RBP9.04□□□□□ -0.96
SPTA1-203ENST00000465741 PDE4BQ07343 736 aa9.04□□□□□ -0.96
SPTA1-203ENST00000465741 CNGB1Q14028 1251 aaPredicted RBP9.04□□□□□ -0.96
SPTA1-203ENST00000465741 ZC3H12AQ5D1E8 599 aaKnown RBP9.04□□□□□ -0.96
SPTA1-203ENST00000465741 FDX2Q6P4F2 183 aa9.04□□□□□ -0.96
SPTA1-203ENST00000465741 LRFN4Q6PJG9 635 aa9.04□□□□□ -0.96
SPTA1-203ENST00000465741 MCF2L2Q86YR7 1114 aa9.04□□□□□ -0.96
SPTA1-203ENST00000465741 SMG8Q8ND04 991 aaKnown RBP9.04□□□□□ -0.96
SPTA1-203ENST00000465741 LENG1Q96BZ8 264 aaPredicted RBP9.04□□□□□ -0.96
SPTA1-203ENST00000465741 SLC12A5Q9H2X9 1139 aa9.04□□□□□ -0.96
SPTA1-203ENST00000465741 BRMS1Q9HCU9 246 aa9.04□□□□□ -0.96
SPTA1-203ENST00000465741 USP21Q9UK80 565 aa9.04□□□□□ -0.96
SPTA1-203ENST00000465741 UBR1Q8IWV7 1749 aa9.03□□□□□ -0.96
SPTA1-203ENST00000465741 SCO2A0A1W2PP80 73 aa9.03□□□□□ -0.96
SPTA1-203ENST00000465741 IGSF3O75054 1194 aa9.03□□□□□ -0.96
SPTA1-203ENST00000465741 ERVK-24P63145 666 aa9.03□□□□□ -0.96
SPTA1-203ENST00000465741 GRIK4Q16099 956 aa9.03□□□□□ -0.96
SPTA1-203ENST00000465741 AKAP4Q5JQC9 854 aa9.03□□□□□ -0.96
SPTA1-203ENST00000465741 ARTNQ5T4W7 220 aa9.03□□□□□ -0.96
SPTA1-203ENST00000465741 ANKRD34AQ69YU3 496 aa9.03□□□□□ -0.96
SPTA1-203ENST00000465741 PUS7Q96PZ0 661 aaKnown RBP9.03□□□□□ -0.96
SPTA1-203ENST00000465741 FERD3LQ96RJ6 166 aa9.03□□□□□ -0.96
SPTA1-203ENST00000465741 PICK1Q9NRD5 415 aa9.03□□□□□ -0.96
SPTA1-203ENST00000465741 PCDHGC5Q9Y5F6 944 aa9.03□□□□□ -0.96
SPTA1-203ENST00000465741 PPLO60437 1756 aa9.03□□□□□ -0.96
SPTA1-203ENST00000465741 SETBP1Q9Y6X0 1596 aa9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms