RNA–Protein interactions for RNA: ENST00000465634.5

TRIM5-208, Transcript of tripartite motif containing 5, human

TSL 1 (best)

Gene TRIM5, Length 602 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TRIM5-208	ENST00000465634	TCEANC2	Q96MN5	208 aa		11.29	□□□□□ -0.6
TRIM5-208	ENST00000465634	LRRC2	Q9BYS8	371 aa		11.29	□□□□□ -0.6
TRIM5-208	ENST00000465634	ELP3	Q9H9T3	547 aa		11.29	□□□□□ -0.6
TRIM5-208	ENST00000465634	KCNH4	Q9UQ05	1017 aa		11.29	□□□□□ -0.6
TRIM5-208	ENST00000465634	CCDC196	A0A1B0GTZ2	297 aa		11.28	□□□□□ -0.6
TRIM5-208	ENST00000465634		A0A1W2PRG0	241 aa		11.28	□□□□□ -0.6
TRIM5-208	ENST00000465634		F5H6K3	240 aa		11.28	□□□□□ -0.6
TRIM5-208	ENST00000465634	KIF5B	P33176	963 aa		11.28	□□□□□ -0.6
TRIM5-208	ENST00000465634	KLRC3	Q07444	240 aa		11.28	□□□□□ -0.6
TRIM5-208	ENST00000465634	TROAP	Q12815	778 aa		11.28	□□□□□ -0.6
TRIM5-208	ENST00000465634	RGMB	Q6NW40	437 aa		11.28	□□□□□ -0.6
TRIM5-208	ENST00000465634	APOA5	Q6Q788	366 aa		11.28	□□□□□ -0.6
TRIM5-208	ENST00000465634	USP17L2	Q6R6M4	530 aa		11.28	□□□□□ -0.6
TRIM5-208	ENST00000465634	FASTKD5	Q7L8L6	764 aa	Known RBP	11.28	□□□□□ -0.6
TRIM5-208	ENST00000465634	ZNF654	Q8IZM8	581 aa		11.28	□□□□□ -0.6
TRIM5-208	ENST00000465634	ACER1	Q8TDN7	264 aa		11.28	□□□□□ -0.6
TRIM5-208	ENST00000465634	GMCL1	Q96IK5	515 aa		11.28	□□□□□ -0.6
TRIM5-208	ENST00000465634	C12orf42	Q96LP6	360 aa		11.28	□□□□□ -0.6
TRIM5-208	ENST00000465634	FEZ1	Q99689	392 aa		11.28	□□□□□ -0.6
TRIM5-208	ENST00000465634	VCPKMT	Q9H867	229 aa		11.28	□□□□□ -0.6
TRIM5-208	ENST00000465634	SH2B1	Q9NRF2	756 aa	Predicted RBP	11.28	□□□□□ -0.6
TRIM5-208	ENST00000465634	GREB1L	Q9C091	1923 aa	Predicted RBP	11.28	□□□□□ -0.6
TRIM5-208	ENST00000465634	KLF18	A0A0U1RQI7	1052 aa		11.27	□□□□□ -0.61
TRIM5-208	ENST00000465634	IRF6	O14896	467 aa		11.27	□□□□□ -0.61
TRIM5-208	ENST00000465634	ZBTB43	O43298	467 aa		11.27	□□□□□ -0.61
TRIM5-208	ENST00000465634	DHX16	O60231	1041 aa	Known RBP	11.27	□□□□□ -0.61
TRIM5-208	ENST00000465634	SNHG28	P0DPA3	235 aa		11.27	□□□□□ -0.61
TRIM5-208	ENST00000465634	PDIA3	P30101	505 aa	Known RBP	11.27	□□□□□ -0.61
TRIM5-208	ENST00000465634	ECE1	P42892	770 aa		11.27	□□□□□ -0.61
TRIM5-208	ENST00000465634	GNAQ	P50148	359 aa		11.27	□□□□□ -0.61
TRIM5-208	ENST00000465634	ZNF157	P51786	506 aa	Predicted RBP	11.27	□□□□□ -0.61
TRIM5-208	ENST00000465634	GTF2A2	P52657	109 aa		11.27	□□□□□ -0.61
TRIM5-208	ENST00000465634	INHBE	P58166	350 aa		11.27	□□□□□ -0.61
TRIM5-208	ENST00000465634	APOBR	Q0VD83	1088 aa		11.27	□□□□□ -0.61
TRIM5-208	ENST00000465634	SNAPC2	Q13487	334 aa		11.27	□□□□□ -0.61
TRIM5-208	ENST00000465634	GPATCH4	Q5T3I0	446 aa	Known RBP	11.27	□□□□□ -0.61
TRIM5-208	ENST00000465634	SPRYD7	Q5W111	196 aa		11.27	□□□□□ -0.61
TRIM5-208	ENST00000465634	CLEC10A	Q8IUN9	316 aa		11.27	□□□□□ -0.61
TRIM5-208	ENST00000465634	PROCA1	Q8NCQ7	364 aa	Predicted RBP	11.27	□□□□□ -0.61
TRIM5-208	ENST00000465634	DCAF4	Q8WV16	495 aa		11.27	□□□□□ -0.61
TRIM5-208	ENST00000465634	OTUD5	Q96G74	571 aa		11.27	□□□□□ -0.61
TRIM5-208	ENST00000465634	WNK4	Q96J92	1243 aa		11.27	□□□□□ -0.61
TRIM5-208	ENST00000465634	LZTS2	Q9BRK4	669 aa		11.27	□□□□□ -0.61
TRIM5-208	ENST00000465634	GPHN	Q9NQX3	736 aa	Predicted RBP	11.27	□□□□□ -0.61
TRIM5-208	ENST00000465634	TMOD4	Q9NZQ9	345 aa		11.27	□□□□□ -0.61
TRIM5-208	ENST00000465634	BRPF3	Q9ULD4	1205 aa		11.27	□□□□□ -0.61
TRIM5-208	ENST00000465634	ABT1	Q9ULW3	272 aa	Known RBP	11.27	□□□□□ -0.61
TRIM5-208	ENST00000465634	TRPM7	Q96QT4	1865 aa		11.27	□□□□□ -0.61
TRIM5-208	ENST00000465634	DOCK1	Q14185	1865 aa		11.26	□□□□□ -0.61
TRIM5-208	ENST00000465634		A0A0G2JLL6	359 aa	Predicted RBP	11.26	□□□□□ -0.61
TRIM5-208	ENST00000465634	TRIM75P	A6NK02	468 aa		11.26	□□□□□ -0.61
TRIM5-208	ENST00000465634	RASSF10	A6NK89	507 aa		11.26	□□□□□ -0.61
TRIM5-208	ENST00000465634	WDR46	O15213	610 aa	Known RBP	11.26	□□□□□ -0.61
TRIM5-208	ENST00000465634	PLA2G6	O60733	806 aa		11.26	□□□□□ -0.61
TRIM5-208	ENST00000465634	PDHB	P11177	359 aa		11.26	□□□□□ -0.61
TRIM5-208	ENST00000465634	CETP	P11597	493 aa		11.26	□□□□□ -0.61
TRIM5-208	ENST00000465634	SMARCA1	P28370	1054 aa		11.26	□□□□□ -0.61
TRIM5-208	ENST00000465634	MTMR2	Q13614	643 aa		11.26	□□□□□ -0.61
TRIM5-208	ENST00000465634	ASPRV1	Q53RT3	343 aa		11.26	□□□□□ -0.61
TRIM5-208	ENST00000465634	SLFN13	Q68D06	897 aa		11.26	□□□□□ -0.61
TRIM5-208	ENST00000465634	PRRT2	Q7Z6L0	340 aa	Predicted RBP	11.26	□□□□□ -0.61
TRIM5-208	ENST00000465634	LRRC47	Q8N1G4	583 aa	Known RBP	11.26	□□□□□ -0.61
TRIM5-208	ENST00000465634	FANCB	Q8NB91	859 aa		11.26	□□□□□ -0.61
TRIM5-208	ENST00000465634	CTCFL	Q8NI51	663 aa	Predicted RBP	11.26	□□□□□ -0.61
TRIM5-208	ENST00000465634	SLK	Q9H2G2	1235 aa	Predicted RBP	11.26	□□□□□ -0.61
TRIM5-208	ENST00000465634	SENP2	Q9HC62	589 aa		11.26	□□□□□ -0.61
TRIM5-208	ENST00000465634	RBM28	Q9NW13	759 aa	Known RBP	11.26	□□□□□ -0.61
TRIM5-208	ENST00000465634	FRMD4A	Q9P2Q2	1039 aa	Predicted RBP	11.26	□□□□□ -0.61
TRIM5-208	ENST00000465634	TPCN1	Q9ULQ1	816 aa		11.26	□□□□□ -0.61
TRIM5-208	ENST00000465634	MYH8	P13535	1937 aa		11.26	□□□□□ -0.61
TRIM5-208	ENST00000465634	NID2	Q14112	1375 aa		11.26	□□□□□ -0.61
TRIM5-208	ENST00000465634	GOLGA8B	A8MQT2	603 aa		11.25	□□□□□ -0.61
TRIM5-208	ENST00000465634	PFKFB2	O60825	505 aa		11.25	□□□□□ -0.61
TRIM5-208	ENST00000465634	NDUFB10	O96000	172 aa		11.25	□□□□□ -0.61
TRIM5-208	ENST00000465634	SLC10A3	P09131	477 aa		11.25	□□□□□ -0.61
TRIM5-208	ENST00000465634	PARP1	P09874	1014 aa	Known RBP	11.25	□□□□□ -0.61
TRIM5-208	ENST00000465634	BMP3	P12645	472 aa		11.25	□□□□□ -0.61
TRIM5-208	ENST00000465634	SLC1A4	P43007	532 aa		11.25	□□□□□ -0.61
TRIM5-208	ENST00000465634	METAP2	P50579	478 aa	Known RBP eCLIP	11.25	□□□□□ -0.61
TRIM5-208	ENST00000465634	PABPC4	Q13310	644 aa	Known RBP eCLIP	11.25	□□□□□ -0.61
TRIM5-208	ENST00000465634	GRM4	Q14833	912 aa		11.25	□□□□□ -0.61
TRIM5-208	ENST00000465634	DEFB115	Q30KQ5	88 aa		11.25	□□□□□ -0.61
TRIM5-208	ENST00000465634	CPLX2	Q6PUV4	134 aa	Known RBP	11.25	□□□□□ -0.61
TRIM5-208	ENST00000465634	CCDC84	Q86UT8	332 aa	Predicted RBP	11.25	□□□□□ -0.61
TRIM5-208	ENST00000465634	RASAL3	Q86YV0	1011 aa		11.25	□□□□□ -0.61
TRIM5-208	ENST00000465634	REM2	Q8IYK8	340 aa	Predicted RBP	11.25	□□□□□ -0.61
TRIM5-208	ENST00000465634	CHURC1	Q8WUH1	139 aa		11.25	□□□□□ -0.61
TRIM5-208	ENST00000465634	CNKSR2	Q8WXI2	1034 aa		11.25	□□□□□ -0.61
TRIM5-208	ENST00000465634	EMILIN3	Q9NT22	766 aa		11.25	□□□□□ -0.61
TRIM5-208	ENST00000465634	TESPA1	A2RU30	521 aa	Predicted RBP	11.24	□□□□□ -0.61
TRIM5-208	ENST00000465634	PALM3	A6NDB9	673 aa	Predicted RBP	11.24	□□□□□ -0.61
TRIM5-208	ENST00000465634	MANSC4	A6NHS7	340 aa	Predicted RBP	11.24	□□□□□ -0.61
TRIM5-208	ENST00000465634	GOLGA8A	A7E2F4	631 aa		11.24	□□□□□ -0.61
TRIM5-208	ENST00000465634	HOXA7	P31268	230 aa	Predicted RBP	11.24	□□□□□ -0.61
TRIM5-208	ENST00000465634	GJA5	P36382	358 aa		11.24	□□□□□ -0.61
TRIM5-208	ENST00000465634	ANP32A	P39687	249 aa	Known RBP	11.24	□□□□□ -0.61
TRIM5-208	ENST00000465634	HMGCS2	P54868	508 aa		11.24	□□□□□ -0.61
TRIM5-208	ENST00000465634	ZNF543	Q08ER8	600 aa		11.24	□□□□□ -0.61
TRIM5-208	ENST00000465634	BECN1	Q14457	450 aa		11.24	□□□□□ -0.61
TRIM5-208	ENST00000465634	ME3	Q16798	604 aa		11.24	□□□□□ -0.61

Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms