RNA–Protein interactions for RNA: ENST00000464577.1

USP48-206, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 2

Gene USP48, Length 2,089 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-206ENST00000464577 SHOX2O60902 331 aaPredicted RBP8.24□□□□□ -1.09
USP48-206ENST00000464577 SYF2O95926 243 aaKnown RBP8.24□□□□□ -1.09
USP48-206ENST00000464577 APPP05067 770 aa8.24□□□□□ -1.09
USP48-206ENST00000464577 ARID4AP29374 1257 aaPredicted RBP8.24□□□□□ -1.09
USP48-206ENST00000464577 IFIT5Q13325 482 aaKnown RBP8.24□□□□□ -1.09
USP48-206ENST00000464577 TCIRG1Q13488 830 aa8.24□□□□□ -1.09
USP48-206ENST00000464577 WWC2Q6AWC2 1192 aa8.24□□□□□ -1.09
USP48-206ENST00000464577 KLHL10Q6JEL2 608 aa8.24□□□□□ -1.09
USP48-206ENST00000464577 USP49Q70CQ1 688 aa8.24□□□□□ -1.09
USP48-206ENST00000464577 PACS2Q86VP3 889 aa8.24□□□□□ -1.09
USP48-206ENST00000464577 ANKLE2Q86XL3 938 aa8.24□□□□□ -1.09
USP48-206ENST00000464577 CRACR2BQ8N4Y2 399 aaPredicted RBP8.24□□□□□ -1.09
USP48-206ENST00000464577 ANKRD20A12PQ8NF67 263 aa8.24□□□□□ -1.09
USP48-206ENST00000464577 PYM1Q9BRP8 204 aaKnown RBP8.24□□□□□ -1.09
USP48-206ENST00000464577 ZBTB3Q9H5J0 574 aa8.24□□□□□ -1.09
USP48-206ENST00000464577 HAUS4Q9H6D7 363 aa8.24□□□□□ -1.09
USP48-206ENST00000464577 RWDD2AQ9UIY3 292 aa8.24□□□□□ -1.09
USP48-206ENST00000464577 RIPOR2Q9Y4F9 1068 aa8.24□□□□□ -1.09
USP48-206ENST00000464577 ARAP2Q8WZ64 1704 aa8.24□□□□□ -1.09
USP48-206ENST00000464577 TNS2Q63HR2 1409 aa8.24□□□□□ -1.09
USP48-206ENST00000464577 A0A087X0B3 334 aa8.23□□□□□ -1.09
USP48-206ENST00000464577 N4BP3O15049 544 aa8.23□□□□□ -1.09
USP48-206ENST00000464577 UQCRFS1P1P0C7P4 283 aa8.23□□□□□ -1.09
USP48-206ENST00000464577 COPB1P53618 953 aaKnown RBP8.23□□□□□ -1.09
USP48-206ENST00000464577 EIF5P55010 431 aaKnown RBP8.23□□□□□ -1.09
USP48-206ENST00000464577 STX17P56962 302 aa8.23□□□□□ -1.09
USP48-206ENST00000464577 IRX3P78415 501 aaPredicted RBP8.23□□□□□ -1.09
USP48-206ENST00000464577 NR5A1Q13285 461 aa8.23□□□□□ -1.09
USP48-206ENST00000464577 SF3B2Q13435 895 aaKnown RBP8.23□□□□□ -1.09
USP48-206ENST00000464577 SART3Q15020 963 aaKnown RBP8.23□□□□□ -1.09
USP48-206ENST00000464577 PPP2R5BQ15173 497 aa8.23□□□□□ -1.09
USP48-206ENST00000464577 DNAJC21Q5F1R6 531 aaKnown RBP8.23□□□□□ -1.09
USP48-206ENST00000464577 METTL24Q5JXM2 366 aa8.23□□□□□ -1.09
USP48-206ENST00000464577 AKNAD1Q5T1N1 836 aa8.23□□□□□ -1.09
USP48-206ENST00000464577 PAPD7Q5XG87 772 aaKnown RBP8.23□□□□□ -1.09
USP48-206ENST00000464577 TMTC2Q8N394 836 aa8.23□□□□□ -1.09
USP48-206ENST00000464577 EHBP1Q8NDI1 1231 aa8.23□□□□□ -1.09
USP48-206ENST00000464577 STAG1Q8WVM7 1258 aa8.23□□□□□ -1.09
USP48-206ENST00000464577 RUBCNQ92622 972 aa8.23□□□□□ -1.09
USP48-206ENST00000464577 EPB41L4AQ9HCS5 686 aaPredicted RBP8.23□□□□□ -1.09
USP48-206ENST00000464577 ZSWIM5Q9P217 1185 aa8.23□□□□□ -1.09
USP48-206ENST00000464577 CTNND2Q9UQB3 1225 aa8.23□□□□□ -1.09
USP48-206ENST00000464577 CDHR2Q9BYE9 1310 aa8.23□□□□□ -1.09
USP48-206ENST00000464577 TNS3Q68CZ2 1445 aa8.23□□□□□ -1.09
USP48-206ENST00000464577 LRP5O75197 1615 aa8.23□□□□□ -1.09
USP48-206ENST00000464577 DOCK2Q92608 1830 aa8.23□□□□□ -1.09
USP48-206ENST00000464577 A0A087WUV0 522 aaPredicted RBP8.23□□□□□ -1.09
USP48-206ENST00000464577 NDUFA10O95299 355 aa8.23□□□□□ -1.09
USP48-206ENST00000464577 TFRCP02786 760 aaKnown RBP8.23□□□□□ -1.09
USP48-206ENST00000464577 AFMP43652 599 aa8.23□□□□□ -1.09
USP48-206ENST00000464577 GTF2A1P52655 376 aaPredicted RBP8.23□□□□□ -1.09
USP48-206ENST00000464577 ZC3H6P61129 1189 aaKnown RBP8.23□□□□□ -1.09
USP48-206ENST00000464577 WTAPQ15007 396 aa8.23□□□□□ -1.09
USP48-206ENST00000464577 NCAPH2Q6IBW4 605 aa8.23□□□□□ -1.09
USP48-206ENST00000464577 SUGP1Q8IWZ8 645 aaKnown RBP8.23□□□□□ -1.09
USP48-206ENST00000464577 IFNL3Q8IZI9 196 aa8.23□□□□□ -1.09
USP48-206ENST00000464577 VGLL2Q8N8G2 317 aa8.23□□□□□ -1.09
USP48-206ENST00000464577 COG1Q8WTW3 980 aa8.23□□□□□ -1.09
USP48-206ENST00000464577 SYMPKQ92797 1274 aaKnown RBP8.23□□□□□ -1.09
USP48-206ENST00000464577 AIDAQ96BJ3 306 aa8.23□□□□□ -1.09
USP48-206ENST00000464577 NUP88Q99567 741 aaPredicted RBP8.23□□□□□ -1.09
USP48-206ENST00000464577 SLF1Q9BQI6 1058 aa8.23□□□□□ -1.09
USP48-206ENST00000464577 RNF26Q9BY78 433 aaPredicted RBP8.23□□□□□ -1.09
USP48-206ENST00000464577 NAPBQ9H115 298 aa8.23□□□□□ -1.09
USP48-206ENST00000464577 REXO2Q9Y3B8 237 aaKnown RBP8.23□□□□□ -1.09
USP48-206ENST00000464577 JRKLQ9Y4A0 524 aa8.23□□□□□ -1.09
USP48-206ENST00000464577 C1orf167Q5SNV9 1468 aa8.22□□□□□ -1.09
USP48-206ENST00000464577 RTL9Q8NET4 1388 aa8.22□□□□□ -1.09
USP48-206ENST00000464577 C19orf67A6NJJ6 358 aa8.22□□□□□ -1.09
USP48-206ENST00000464577 PHACTR2O75167 634 aa8.22□□□□□ -1.09
USP48-206ENST00000464577 IDH1O75874 414 aaKnown RBP8.22□□□□□ -1.09
USP48-206ENST00000464577 ABL1P00519 1130 aa8.22□□□□□ -1.09
USP48-206ENST00000464577 A1BGP04217 495 aa8.22□□□□□ -1.09
USP48-206ENST00000464577 XBP1P17861 261 aa8.22□□□□□ -1.09
USP48-206ENST00000464577 GUCY2CP25092 1073 aa8.22□□□□□ -1.09
USP48-206ENST00000464577 KRT9P35527 623 aa8.22□□□□□ -1.09
USP48-206ENST00000464577 PAK1Q13153 545 aa8.22□□□□□ -1.09
USP48-206ENST00000464577 STIM1Q13586 685 aa8.22□□□□□ -1.09
USP48-206ENST00000464577 TCP11X2Q5H9J9 407 aa8.22□□□□□ -1.09
USP48-206ENST00000464577 MFSD6Q6ZSS7 791 aa8.22□□□□□ -1.09
USP48-206ENST00000464577 PLCD3Q8N3E9 789 aa8.22□□□□□ -1.09
USP48-206ENST00000464577 ZBTB38Q8NAP3 1195 aaPredicted RBP8.22□□□□□ -1.09
USP48-206ENST00000464577 OXER1Q8TDS5 423 aa8.22□□□□□ -1.09
USP48-206ENST00000464577 SMARCC1Q92922 1105 aaPredicted RBP8.22□□□□□ -1.09
USP48-206ENST00000464577 RBM33Q96EV2 1170 aaKnown RBP8.22□□□□□ -1.09
USP48-206ENST00000464577 EPSTI1Q96J88 318 aa8.22□□□□□ -1.09
USP48-206ENST00000464577 CABP5Q9NP86 173 aa8.22□□□□□ -1.09
USP48-206ENST00000464577 RMND1Q9NWS8 449 aa8.22□□□□□ -1.09
USP48-206ENST00000464577 SAR1BQ9Y6B6 198 aa8.22□□□□□ -1.09
USP48-206ENST00000464577 EPN1Q9Y6I3 576 aaPredicted RBP8.22□□□□□ -1.09
USP48-206ENST00000464577 A0A1W2PQC6 194 aa8.22□□□□□ -1.09
USP48-206ENST00000464577 ANO9A1A5B4 782 aa8.22□□□□□ -1.09
USP48-206ENST00000464577 POTEMA6NI47 508 aa8.22□□□□□ -1.09
USP48-206ENST00000464577 ERVV-2B6SEH9 535 aa8.22□□□□□ -1.09
USP48-206ENST00000464577 KCNJ18B7U540 433 aa8.22□□□□□ -1.09
USP48-206ENST00000464577 RNF225M0QZC1 329 aaPredicted RBP8.22□□□□□ -1.09
USP48-206ENST00000464577 GTPBP6O43824 516 aaPredicted RBP8.22□□□□□ -1.09
USP48-206ENST00000464577 CSB-PGBD3P0DP91 1061 aa8.22□□□□□ -1.09
USP48-206ENST00000464577 GNAT2P19087 354 aa8.22□□□□□ -1.09
USP48-206ENST00000464577 KRT2P35908 639 aa8.22□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms