RNA–Protein interactions for RNA: ENST00000464256.1

PAXBP1-206, Transcript of PAX3 and PAX7 binding protein 1, humanhuman

TSL 1 (best)

Gene PAXBP1, Length 1,692 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAXBP1-206ENST00000464256 ESR2Q92731 530 aa29.95■■■□□ 2.38
PAXBP1-206ENST00000464256 VCPKMTQ9H867 229 aa29.95■■■□□ 2.38
PAXBP1-206ENST00000464256 TTLL1O95922 423 aa29.94■■■□□ 2.38
PAXBP1-206ENST00000464256 USP14P54578 494 aa29.94■■■□□ 2.38
PAXBP1-206ENST00000464256 ASCC2Q9H1I8 757 aaPredicted RBP29.94■■■□□ 2.38
PAXBP1-206ENST00000464256 ADGRA2Q96PE1 1338 aa29.94■■■□□ 2.38
PAXBP1-206ENST00000464256 RCSD1Q6JBY9 416 aa29.93■■■□□ 2.38
PAXBP1-206ENST00000464256 NUP88Q99567 741 aaPredicted RBP29.93■■■□□ 2.38
PAXBP1-206ENST00000464256 CFHR5Q9BXR6 569 aa29.93■■■□□ 2.38
PAXBP1-206ENST00000464256 CTCFP49711 727 aaPredicted RBP29.92■■■□□ 2.38
PAXBP1-206ENST00000464256 CHST3Q7LGC8 479 aa29.92■■■□□ 2.38
PAXBP1-206ENST00000464256 RPAP3Q9H6T3 665 aaPredicted RBP29.92■■■□□ 2.38
PAXBP1-206ENST00000464256 ZCCHC17Q9NP64 241 aaKnown RBP29.92■■■□□ 2.38
PAXBP1-206ENST00000464256 CAP1Q01518 475 aa29.91■■■□□ 2.38
PAXBP1-206ENST00000464256 POTEEQ6S8J3 1075 aa29.91■■■□□ 2.38
PAXBP1-206ENST00000464256 ZFYVE28Q9HCC9 887 aa29.91■■■□□ 2.38
PAXBP1-206ENST00000464256 CPA4Q9UI42 421 aa29.91■■■□□ 2.38
PAXBP1-206ENST00000464256 HTTP42858 3142 aa29.91■■■□□ 2.38
PAXBP1-206ENST00000464256 COL11A1P12107 1806 aaPredicted RBP29.91■■■□□ 2.38
PAXBP1-206ENST00000464256 SEC24BO95487 1268 aa29.91■■■□□ 2.38
PAXBP1-206ENST00000464256 NOVP48745 357 aa29.91■■■□□ 2.38
PAXBP1-206ENST00000464256 MKL1Q969V6 931 aa29.91■■■□□ 2.38
PAXBP1-206ENST00000464256 KRT23Q9C075 422 aa29.91■■■□□ 2.38
PAXBP1-206ENST00000464256 CENPFP49454 3210 aa29.9■■■□□ 2.38
PAXBP1-206ENST00000464256 F5H6K3 240 aa29.9■■■□□ 2.38
PAXBP1-206ENST00000464256 ECM2O94769 699 aaPredicted RBP29.9■■■□□ 2.38
PAXBP1-206ENST00000464256 NDUFB10O96000 172 aa29.9■■■□□ 2.38
PAXBP1-206ENST00000464256 KLRC3Q07444 240 aa29.9■■■□□ 2.38
PAXBP1-206ENST00000464256 P2RX7Q99572 595 aaKnown RBP29.9■■■□□ 2.38
PAXBP1-206ENST00000464256 SH2D4AQ9H788 454 aa29.9■■■□□ 2.38
PAXBP1-206ENST00000464256 CNNM2Q9H8M5 875 aa29.9■■■□□ 2.38
PAXBP1-206ENST00000464256 TCP11L1Q9NUJ3 509 aa29.9■■■□□ 2.38
PAXBP1-206ENST00000464256 MTMR7Q9Y216 660 aa29.9■■■□□ 2.38
PAXBP1-206ENST00000464256 SLC45A1Q9Y2W3 748 aa29.9■■■□□ 2.38
PAXBP1-206ENST00000464256 GPR25O00155 361 aa29.89■■■□□ 2.38
PAXBP1-206ENST00000464256 TLR2O60603 784 aa29.89■■■□□ 2.38
PAXBP1-206ENST00000464256 HOXA7P31268 230 aaPredicted RBP29.89■■■□□ 2.38
PAXBP1-206ENST00000464256 ANTXR2P58335 489 aa29.89■■■□□ 2.38
PAXBP1-206ENST00000464256 PARK7Q99497 189 aaKnown RBP29.89■■■□□ 2.38
PAXBP1-206ENST00000464256 ADCK5Q3MIX3 580 aa29.88■■■□□ 2.37
PAXBP1-206ENST00000464256 FAM83BQ5T0W9 1011 aa29.88■■■□□ 2.37
PAXBP1-206ENST00000464256 MB21D2Q8IYB1 491 aaPredicted RBP29.88■■■□□ 2.37
PAXBP1-206ENST00000464256 ZNF296Q8WUU4 475 aaPredicted RBP29.88■■■□□ 2.37
PAXBP1-206ENST00000464256 TMEM47Q9BQJ4 181 aa29.88■■■□□ 2.37
PAXBP1-206ENST00000464256 REC8O95072 547 aa29.88■■■□□ 2.37
PAXBP1-206ENST00000464256 CATSPERGQ6ZRH7 1159 aa29.88■■■□□ 2.37
PAXBP1-206ENST00000464256 GOPCQ9HD26 462 aa29.88■■■□□ 2.37
PAXBP1-206ENST00000464256 FBXO28Q9NVF7 368 aa29.88■■■□□ 2.37
PAXBP1-206ENST00000464256 TNKSO95271 1327 aa29.87■■■□□ 2.37
PAXBP1-206ENST00000464256 IRX3P78415 501 aaPredicted RBP29.87■■■□□ 2.37
PAXBP1-206ENST00000464256 C8orf34Q49A92 452 aa29.87■■■□□ 2.37
PAXBP1-206ENST00000464256 ENAHQ8N8S7 591 aaPredicted RBP29.87■■■□□ 2.37
PAXBP1-206ENST00000464256 NCOA7Q8NI08 942 aa29.87■■■□□ 2.37
PAXBP1-206ENST00000464256 ZSCAN10Q96SZ4 725 aaPredicted RBP29.87■■■□□ 2.37
PAXBP1-206ENST00000464256 USP26Q9BXU7 913 aa29.87■■■□□ 2.37
PAXBP1-206ENST00000464256 TANGO6Q9C0B7 1094 aa29.87■■■□□ 2.37
PAXBP1-206ENST00000464256 SENP2Q9HC62 589 aa29.87■■■□□ 2.37
PAXBP1-206ENST00000464256 MGAMO43451 1857 aa29.87■■■□□ 2.37
PAXBP1-206ENST00000464256 DOCK3Q8IZD9 2030 aa29.86■■■□□ 2.37
PAXBP1-206ENST00000464256 HSPA4P34932 840 aa29.86■■■□□ 2.37
PAXBP1-206ENST00000464256 TRDNQ13061 729 aa29.86■■■□□ 2.37
PAXBP1-206ENST00000464256 C17orf99Q6UX52 265 aa29.86■■■□□ 2.37
PAXBP1-206ENST00000464256 SMCR8Q8TEV9 937 aaPredicted RBP29.86■■■□□ 2.37
PAXBP1-206ENST00000464256 LPAR1Q92633 364 aa29.86■■■□□ 2.37
PAXBP1-206ENST00000464256 USP17L15C9J2P7 530 aa29.85■■■□□ 2.37
PAXBP1-206ENST00000464256 USP17L13C9JLJ4 530 aa29.85■■■□□ 2.37
PAXBP1-206ENST00000464256 USP17L11C9JVI0 530 aa29.85■■■□□ 2.37
PAXBP1-206ENST00000464256 USP17L18D6R9N7 530 aa29.85■■■□□ 2.37
PAXBP1-206ENST00000464256 USP17L22D6RA61 530 aa29.85■■■□□ 2.37
PAXBP1-206ENST00000464256 USP17L17D6RBQ6 530 aa29.85■■■□□ 2.37
PAXBP1-206ENST00000464256 USP17L19D6RCP7 530 aa29.85■■■□□ 2.37
PAXBP1-206ENST00000464256 USP17L20D6RJB6 530 aa29.85■■■□□ 2.37
PAXBP1-206ENST00000464256 USP17L24Q0WX57 530 aa29.85■■■□□ 2.37
PAXBP1-206ENST00000464256 SAMD1Q6SPF0 538 aaPredicted RBP29.85■■■□□ 2.37
PAXBP1-206ENST00000464256 RALYLQ86SE5 291 aaKnown RBP29.85■■■□□ 2.37
PAXBP1-206ENST00000464256 GPHNQ9NQX3 736 aaPredicted RBP29.85■■■□□ 2.37
PAXBP1-206ENST00000464256 A0A0G2JMZ2 1700 aa29.85■■■□□ 2.37
PAXBP1-206ENST00000464256 OSBPP22059 807 aa29.85■■■□□ 2.37
PAXBP1-206ENST00000464256 HERVK_113P62684 666 aa29.85■■■□□ 2.37
PAXBP1-206ENST00000464256 PNMA3Q9UL41 463 aa29.85■■■□□ 2.37
PAXBP1-206ENST00000464256 WDR46O15213 610 aaKnown RBP29.84■■■□□ 2.37
PAXBP1-206ENST00000464256 PABPC4Q13310 644 aaKnown RBP eCLIP29.84■■■□□ 2.37
PAXBP1-206ENST00000464256 SLFN13Q68D06 897 aa29.84■■■□□ 2.37
PAXBP1-206ENST00000464256 IQCA1Q86XH1 822 aa29.84■■■□□ 2.37
PAXBP1-206ENST00000464256 ANKRD13CQ8N6S4 541 aa29.84■■■□□ 2.37
PAXBP1-206ENST00000464256 GMCL1P1Q8NEA9 526 aa29.84■■■□□ 2.37
PAXBP1-206ENST00000464256 TXNRD2Q9NNW7 524 aa29.84■■■□□ 2.37
PAXBP1-206ENST00000464256 SNX14Q9Y5W7 946 aa29.84■■■□□ 2.37
PAXBP1-206ENST00000464256 BCRP11274 1271 aa29.83■■■□□ 2.37
PAXBP1-206ENST00000464256 MCCP23508 829 aa29.83■■■□□ 2.37
PAXBP1-206ENST00000464256 SEC23AQ15436 765 aa29.83■■■□□ 2.37
PAXBP1-206ENST00000464256 SPDYE16A6NNV3 312 aaPredicted RBP29.82■■■□□ 2.36
PAXBP1-206ENST00000464256 TOP1P11387 765 aaKnown RBP29.82■■■□□ 2.36
PAXBP1-206ENST00000464256 CTGFP29279 349 aa29.82■■■□□ 2.36
PAXBP1-206ENST00000464256 KCNB2Q92953 911 aa29.82■■■□□ 2.36
PAXBP1-206ENST00000464256 LRRC2Q9BYS8 371 aa29.82■■■□□ 2.36
PAXBP1-206ENST00000464256 ARHGAP39Q9C0H5 1083 aa29.82■■■□□ 2.36
PAXBP1-206ENST00000464256 CPA1P15085 419 aa29.82■■■□□ 2.36
PAXBP1-206ENST00000464256 RNF20Q5VTR2 975 aa29.82■■■□□ 2.36
PAXBP1-206ENST00000464256 TCEANC2Q96MN5 208 aa29.82■■■□□ 2.36
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms