RNA–Protein interactions for RNA: ENST00000463407.5

NUP58-206, Transcript of nucleoporin 58, humanhuman

TSL 1 (best) BASIC

Gene NUP58, Length 6,360 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP58-206ENST00000463407 CDC42BPGQ6DT37 1551 aa14.28□□□□□ -0.12
NUP58-206ENST00000463407 ABCC3O15438 1527 aa14.28□□□□□ -0.12
NUP58-206ENST00000463407 PTH1RQ03431 593 aa14.28□□□□□ -0.12
NUP58-206ENST00000463407 PPP1R7Q15435 360 aa14.28□□□□□ -0.12
NUP58-206ENST00000463407 VWA3BQ502W6 1294 aa14.28□□□□□ -0.12
NUP58-206ENST00000463407 MCTP2Q6DN12 878 aa14.28□□□□□ -0.12
NUP58-206ENST00000463407 LEO1Q8WVC0 666 aaPredicted RBP14.28□□□□□ -0.12
NUP58-206ENST00000463407 PNMA2Q9UL42 364 aa14.28□□□□□ -0.12
NUP58-206ENST00000463407 PALM3A6NDB9 673 aaPredicted RBP14.28□□□□□ -0.12
NUP58-206ENST00000463407 GSPT1P15170 499 aaKnown RBP14.28□□□□□ -0.12
NUP58-206ENST00000463407 POLA2Q14181 598 aa14.28□□□□□ -0.12
NUP58-206ENST00000463407 BLIDQ8IZY5 108 aa14.28□□□□□ -0.12
NUP58-206ENST00000463407 C21orf2O43822 256 aa14.27□□□□□ -0.12
NUP58-206ENST00000463407 NT5C3AQ9H0P0 336 aa14.27□□□□□ -0.12
NUP58-206ENST00000463407 TET3O43151 1660 aa14.27□□□□□ -0.12
NUP58-206ENST00000463407 IGBP1P78318 339 aa14.27□□□□□ -0.12
NUP58-206ENST00000463407 CC2D2BQ6DHV5 1058 aa14.27□□□□□ -0.12
NUP58-206ENST00000463407 GPKOWQ92917 476 aaPredicted RBP eCLIP14.27□□□□□ -0.123e-10■■■■□ 24.6
NUP58-206ENST00000463407 KCNG1Q9UIX4 513 aa14.27□□□□□ -0.12
NUP58-206ENST00000463407 SBDSQ9Y3A5 250 aaKnown RBP eCLIP14.27□□□□□ -0.12
NUP58-206ENST00000463407 FAM169AQ9Y6X4 670 aa14.27□□□□□ -0.12
NUP58-206ENST00000463407 KDM3AQ9Y4C1 1321 aa14.27□□□□□ -0.12
NUP58-206ENST00000463407 USP17L3A6NCW0 530 aa14.27□□□□□ -0.13
NUP58-206ENST00000463407 USP17L4A6NCW7 530 aa14.27□□□□□ -0.13
NUP58-206ENST00000463407 NDC80O14777 642 aa14.27□□□□□ -0.13
NUP58-206ENST00000463407 NR1I2O75469 434 aa14.27□□□□□ -0.13
NUP58-206ENST00000463407 GDF11O95390 407 aa14.27□□□□□ -0.13
NUP58-206ENST00000463407 GRAPQ13588 217 aa14.27□□□□□ -0.13
NUP58-206ENST00000463407 USP17L1Q7RTZ2 530 aa14.27□□□□□ -0.13
NUP58-206ENST00000463407 GRAPLQ8TC17 118 aaPredicted RBP14.27□□□□□ -0.13
NUP58-206ENST00000463407 XKR9Q5GH70 373 aa14.27□□□□□ -0.13
NUP58-206ENST00000463407 TEKT3Q9BXF9 490 aa14.27□□□□□ -0.13
NUP58-206ENST00000463407 TXNDC16Q9P2K2 825 aa14.27□□□□□ -0.13
NUP58-206ENST00000463407 MED23Q9ULK4 1368 aa14.27□□□□□ -0.13
NUP58-206ENST00000463407 TNNI1P19237 187 aa14.27□□□□□ -0.13
NUP58-206ENST00000463407 DYNLL1P63167 89 aaKnown RBP14.27□□□□□ -0.13
NUP58-206ENST00000463407 PPP1R9BQ96SB3 815 aa14.27□□□□□ -0.13
NUP58-206ENST00000463407 UTP18Q9Y5J1 556 aaKnown RBP eCLIP14.27□□□□□ -0.13
NUP58-206ENST00000463407 ERCC3P19447 782 aa14.26□□□□□ -0.13
NUP58-206ENST00000463407 BMS1Q14692 1282 aaKnown RBP14.26□□□□□ -0.13
NUP58-206ENST00000463407 ZBTB8OSQ8IWT0 167 aa14.26□□□□□ -0.13
NUP58-206ENST00000463407 BAG1Q99933 345 aaPredicted RBP14.26□□□□□ -0.13
NUP58-206ENST00000463407 ANO3Q9BYT9 981 aa14.26□□□□□ -0.13
NUP58-206ENST00000463407 BLZF1Q9H2G9 400 aa14.26□□□□□ -0.13
NUP58-206ENST00000463407 ADCY10Q96PN6 1610 aa14.26□□□□□ -0.13
NUP58-206ENST00000463407 ERCC6L2Q5T890 1561 aa14.26□□□□□ -0.13
NUP58-206ENST00000463407 SPOPO43791 374 aa14.26□□□□□ -0.13
NUP58-206ENST00000463407 ZNF202O95125 648 aa14.26□□□□□ -0.13
NUP58-206ENST00000463407 FGAP02671 866 aa14.26□□□□□ -0.13
NUP58-206ENST00000463407 TECP42680 631 aa14.26□□□□□ -0.13
NUP58-206ENST00000463407 ME3Q16798 604 aa14.26□□□□□ -0.13
NUP58-206ENST00000463407 FANCBQ8NB91 859 aa14.26□□□□□ -0.13
NUP58-206ENST00000463407 FAM193BQ96PV7 902 aaPredicted RBP14.26□□□□□ -0.13
NUP58-206ENST00000463407 DDAH1O94760 285 aa14.26□□□□□ -0.13
NUP58-206ENST00000463407 RBM6P78332 1123 aaKnown RBP14.26□□□□□ -0.13
NUP58-206ENST00000463407 PLA2G4DQ86XP0 818 aa14.26□□□□□ -0.13
NUP58-206ENST00000463407 SLFN12Q8IYM2 578 aa14.26□□□□□ -0.13
NUP58-206ENST00000463407 DDX25Q9UHL0 483 aaKnown RBP14.26□□□□□ -0.13
NUP58-206ENST00000463407 TUBB4AP04350 444 aa14.26□□□□□ -0.13
NUP58-206ENST00000463407 RASA3Q14644 834 aa14.26□□□□□ -0.13
NUP58-206ENST00000463407 UBE3CQ15386 1083 aa14.26□□□□□ -0.13
NUP58-206ENST00000463407 CCDC14Q49A88 953 aa14.26□□□□□ -0.13
NUP58-206ENST00000463407 SUSD4Q5VX71 490 aa14.26□□□□□ -0.13
NUP58-206ENST00000463407 IGSF22Q8N9C0 903 aa14.26□□□□□ -0.13
NUP58-206ENST00000463407 GTF3C6Q969F1 213 aa14.26□□□□□ -0.13
NUP58-206ENST00000463407 SUGCTQ9HAC7 445 aa14.26□□□□□ -0.13
NUP58-206ENST00000463407 MTUS1Q9ULD2 1270 aa14.26□□□□□ -0.13
NUP58-206ENST00000463407 ZBTB7AO95365 584 aa14.26□□□□□ -0.13
NUP58-206ENST00000463407 CCDC17Q96LX7 622 aa14.26□□□□□ -0.13
NUP58-206ENST00000463407 CD19P15391 556 aa14.25□□□□□ -0.13
NUP58-206ENST00000463407 IREB2P48200 963 aaKnown RBP14.25□□□□□ -0.13
NUP58-206ENST00000463407 RDH13Q8NBN7 331 aa14.25□□□□□ -0.13
NUP58-206ENST00000463407 COPRSQ9NQ92 184 aa14.25□□□□□ -0.13
NUP58-206ENST00000463407 RPS6KA4O75676 772 aa14.25□□□□□ -0.13
NUP58-206ENST00000463407 P4HA1P13674 534 aa14.25□□□□□ -0.13
NUP58-206ENST00000463407 GPBP1Q86WP2 473 aa14.25□□□□□ -0.13
NUP58-206ENST00000463407 GPR101Q96P66 508 aaPredicted RBP14.25□□□□□ -0.13
NUP58-206ENST00000463407 PALD1Q9ULE6 856 aa14.25□□□□□ -0.13
NUP58-206ENST00000463407 NLRP12P59046 1061 aa14.25□□□□□ -0.13
NUP58-206ENST00000463407 KMT5BQ4FZB7 885 aa14.25□□□□□ -0.13
NUP58-206ENST00000463407 FAM160B1Q5W0V3 765 aa14.25□□□□□ -0.13
NUP58-206ENST00000463407 MIGA2Q7L4E1 593 aa14.25□□□□□ -0.13
NUP58-206ENST00000463407 ZMYND15Q9H091 742 aa14.25□□□□□ -0.13
NUP58-206ENST00000463407 ZMYM6O95789 1325 aa14.25□□□□□ -0.13
NUP58-206ENST00000463407 POSTNQ15063 836 aa14.25□□□□□ -0.13
NUP58-206ENST00000463407 TM6SF1Q9BZW5 370 aa14.25□□□□□ -0.13
NUP58-206ENST00000463407 ATP2A2P16615 1042 aaKnown RBP14.25□□□□□ -0.13
NUP58-206ENST00000463407 TRIM14Q14142 442 aa14.25□□□□□ -0.13
NUP58-206ENST00000463407 INF2Q27J81 1249 aa14.25□□□□□ -0.13
NUP58-206ENST00000463407 KCTD1Q719H9 257 aa14.25□□□□□ -0.13
NUP58-206ENST00000463407 MED10Q9BTT4 135 aa14.25□□□□□ -0.13
NUP58-206ENST00000463407 SSH2Q76I76 1423 aa14.24□□□□□ -0.13
NUP58-206ENST00000463407 STAMQ92783 540 aa14.24□□□□□ -0.13
NUP58-206ENST00000463407 ZNF274Q96GC6 653 aaPredicted RBP14.24□□□□□ -0.13
NUP58-206ENST00000463407 E7EVH7 732 aa14.24□□□□□ -0.13
NUP58-206ENST00000463407 CCDC122Q5T0U0 273 aa14.24□□□□□ -0.13
NUP58-206ENST00000463407 AP5M1Q9H0R1 490 aa14.24□□□□□ -0.13
NUP58-206ENST00000463407 PCDHA12Q9UN75 941 aa14.24□□□□□ -0.13
NUP58-206ENST00000463407 TTLL1O95922 423 aa14.24□□□□□ -0.13
NUP58-206ENST00000463407 LIG4P49917 911 aa14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms