RNA–Protein interactions for RNA: ENST00000463370.5

VAPB-203, Transcript of VAMP associated protein B and C, humanhuman

TSL 2

Gene VAPB, Length 2,393 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-203ENST00000463370 RESP18Q5W5W9 173 aa14.75□□□□□ -0.05
VAPB-203ENST00000463370 CLEC10AQ8IUN9 316 aa14.75□□□□□ -0.05
VAPB-203ENST00000463370 ZFPM1Q8IX07 1006 aa14.75□□□□□ -0.05
VAPB-203ENST00000463370 NEDD1Q8NHV4 660 aa14.75□□□□□ -0.05
VAPB-203ENST00000463370 GPKOWQ92917 476 aaPredicted RBP eCLIP14.75□□□□□ -0.05
VAPB-203ENST00000463370 EIF2AK3Q9NZJ5 1116 aaKnown RBP14.75□□□□□ -0.05
VAPB-203ENST00000463370 ZNF165P49910 485 aa14.74□□□□□ -0.05
VAPB-203ENST00000463370 DACT2Q5SW24 774 aa14.74□□□□□ -0.05
VAPB-203ENST00000463370 TYW1BQ6NUM6 668 aa14.74□□□□□ -0.05
VAPB-203ENST00000463370 TEKT1Q969V4 418 aa14.74□□□□□ -0.05
VAPB-203ENST00000463370 FBXO2Q9UK22 296 aaPredicted RBP14.74□□□□□ -0.05
VAPB-203ENST00000463370 CRKP46108 304 aa14.74□□□□□ -0.05
VAPB-203ENST00000463370 HHIPL2Q6UWX4 724 aa14.74□□□□□ -0.05
VAPB-203ENST00000463370 JMYQ8N9B5 988 aa14.74□□□□□ -0.05
VAPB-203ENST00000463370 CNKSR1Q969H4 720 aa14.74□□□□□ -0.05
VAPB-203ENST00000463370 ZNF287Q9HBT7 754 aa14.74□□□□□ -0.05
VAPB-203ENST00000463370 BAZ2BQ9UIF8 2168 aaKnown RBP14.73□□□□□ -0.05
VAPB-203ENST00000463370 C21orf2O43822 256 aa14.73□□□□□ -0.05
VAPB-203ENST00000463370 KRI1Q8N9T8 703 aaKnown RBP14.73□□□□□ -0.05
VAPB-203ENST00000463370 FAM237AA0A1B0GTK4 181 aa14.73□□□□□ -0.05
VAPB-203ENST00000463370 PALM3A6NDB9 673 aaPredicted RBP14.73□□□□□ -0.05
VAPB-203ENST00000463370 CUTAO60888 179 aa14.73□□□□□ -0.05
VAPB-203ENST00000463370 AKR1B1P15121 316 aa14.73□□□□□ -0.05
VAPB-203ENST00000463370 SYKP43405 635 aa14.73□□□□□ -0.05
VAPB-203ENST00000463370 NT5C2P49902 561 aa14.73□□□□□ -0.05
VAPB-203ENST00000463370 STRIP1Q5VSL9 837 aa14.73□□□□□ -0.05
VAPB-203ENST00000463370 USP17L2Q6R6M4 530 aa14.73□□□□□ -0.05
VAPB-203ENST00000463370 OSBPL5Q9H0X9 879 aaPredicted RBP14.73□□□□□ -0.05
VAPB-203ENST00000463370 QSER1Q2KHR3 1735 aa14.73□□□□□ -0.05
VAPB-203ENST00000463370 PTPREP23469 700 aa14.72□□□□□ -0.05
VAPB-203ENST00000463370 EIF6P56537 245 aaKnown RBP14.72□□□□□ -0.05
VAPB-203ENST00000463370 IQCB1Q15051 598 aa14.72□□□□□ -0.05
VAPB-203ENST00000463370 STX1AQ16623 288 aa14.72□□□□□ -0.05
VAPB-203ENST00000463370 CCDC178Q5BJE1 867 aa14.72□□□□□ -0.05
VAPB-203ENST00000463370 USP49Q70CQ1 688 aa14.72□□□□□ -0.05
VAPB-203ENST00000463370 KIAA1468Q9P260 1216 aa14.72□□□□□ -0.05
VAPB-203ENST00000463370 NLRP5P59047 1200 aa14.71□□□□□ -0.05
VAPB-203ENST00000463370 ZSCAN30Q86W11 494 aa14.71□□□□□ -0.05
VAPB-203ENST00000463370 YDJCA8MPS7 323 aa14.71□□□□□ -0.05
VAPB-203ENST00000463370 BIN1O00499 593 aa14.71□□□□□ -0.05
VAPB-203ENST00000463370 NOVP48745 357 aa14.71□□□□□ -0.05
VAPB-203ENST00000463370 LONRF3Q496Y0 759 aa14.71□□□□□ -0.05
VAPB-203ENST00000463370 HS1BP3Q53T59 392 aa14.71□□□□□ -0.05
VAPB-203ENST00000463370 PIK3AP1Q6ZUJ8 805 aa14.71□□□□□ -0.05
VAPB-203ENST00000463370 RASGRP4Q8TDF6 673 aa14.71□□□□□ -0.05
VAPB-203ENST00000463370 ZDHHC15Q96MV8 337 aa14.71□□□□□ -0.05
VAPB-203ENST00000463370 SCN9AQ15858 1988 aa14.71□□□□□ -0.05
VAPB-203ENST00000463370 KLRF2D3W0D1 207 aa14.7□□□□□ -0.06
VAPB-203ENST00000463370 SHMT1P34896 483 aa14.7□□□□□ -0.06
VAPB-203ENST00000463370 KIAA2012Q0VF49 1180 aa14.7□□□□□ -0.06
VAPB-203ENST00000463370 TCP10Q12799 353 aa14.7□□□□□ -0.06
VAPB-203ENST00000463370 DPCR1Q3MIW9 517 aa14.7□□□□□ -0.06
VAPB-203ENST00000463370 WWC2Q6AWC2 1192 aa14.7□□□□□ -0.06
VAPB-203ENST00000463370 SERPINB13Q9UIV8 391 aa14.7□□□□□ -0.06
VAPB-203ENST00000463370 KCNH3Q9ULD8 1083 aa14.7□□□□□ -0.06
VAPB-203ENST00000463370 TRIM75PA6NK02 468 aa14.7□□□□□ -0.06
VAPB-203ENST00000463370 FAM196BA6NMK8 535 aa14.7□□□□□ -0.06
VAPB-203ENST00000463370 USP17L5A8MUK1 530 aa14.7□□□□□ -0.06
VAPB-203ENST00000463370 FOXN1O15353 648 aa14.7□□□□□ -0.06
VAPB-203ENST00000463370 RBM5P52756 815 aaKnown RBP eCLIP14.7□□□□□ -0.06
VAPB-203ENST00000463370 ZNF174Q15697 407 aa14.7□□□□□ -0.06
VAPB-203ENST00000463370 SHROOM1Q2M3G4 852 aaPredicted RBP14.7□□□□□ -0.06
VAPB-203ENST00000463370 ISM2Q6H9L7 571 aa14.7□□□□□ -0.06
VAPB-203ENST00000463370 DHX40Q8IX18 779 aaKnown RBP14.7□□□□□ -0.06
VAPB-203ENST00000463370 LRRC47Q8N1G4 583 aaKnown RBP14.7□□□□□ -0.06
VAPB-203ENST00000463370 CSRNP2Q9H175 543 aa14.7□□□□□ -0.06
VAPB-203ENST00000463370 DNAJC18Q9H819 358 aa14.7□□□□□ -0.06
VAPB-203ENST00000463370 MTMR4Q9NYA4 1195 aa14.7□□□□□ -0.06
VAPB-203ENST00000463370 NOL7Q9UMY1 257 aaKnown RBP14.7□□□□□ -0.06
VAPB-203ENST00000463370 SRPRBQ9Y5M8 271 aaKnown RBP14.7□□□□□ -0.06
VAPB-203ENST00000463370 TOP1P11387 765 aaKnown RBP14.69□□□□□ -0.06
VAPB-203ENST00000463370 PNOCQ13519 176 aa14.69□□□□□ -0.06
VAPB-203ENST00000463370 C10orf71Q711Q0 1435 aa14.69□□□□□ -0.06
VAPB-203ENST00000463370 ZNF830Q96NB3 372 aaPredicted RBP14.69□□□□□ -0.06
VAPB-203ENST00000463370 BRMS1Q9HCU9 246 aa14.69□□□□□ -0.06
VAPB-203ENST00000463370 CCDC39Q9UFE4 941 aa14.69□□□□□ -0.06
VAPB-203ENST00000463370 FAM198AQ9UFP1 575 aa14.69□□□□□ -0.06
VAPB-203ENST00000463370 MYH1P12882 1939 aa14.69□□□□□ -0.06
VAPB-203ENST00000463370 IGKV6D-41A0A0C4DH26 115 aa14.69□□□□□ -0.06
VAPB-203ENST00000463370 PPIP5K2O43314 1243 aa14.69□□□□□ -0.06
VAPB-203ENST00000463370 PTMAP06454 111 aaKnown RBP14.69□□□□□ -0.06
VAPB-203ENST00000463370 KCNA3P22001 575 aa14.69□□□□□ -0.06
VAPB-203ENST00000463370 CLCN1P35523 988 aa14.69□□□□□ -0.06
VAPB-203ENST00000463370 SH3BP5LQ7L8J4 393 aa14.69□□□□□ -0.06
VAPB-203ENST00000463370 HEATR3Q7Z4Q2 680 aa14.69□□□□□ -0.06
VAPB-203ENST00000463370 METTL16Q86W50 562 aaKnown RBP14.69□□□□□ -0.06
VAPB-203ENST00000463370 ANO10Q9NW15 660 aa14.69□□□□□ -0.06
VAPB-203ENST00000463370 PLIN4Q96Q06 1357 aa14.69□□□□□ -0.06
VAPB-203ENST00000463370 FOCADQ5VW36 1801 aa14.68□□□□□ -0.06
VAPB-203ENST00000463370 DDTLA6NHG4 134 aaPredicted RBP14.68□□□□□ -0.06
VAPB-203ENST00000463370 PARP1P09874 1014 aaKnown RBP14.68□□□□□ -0.06
VAPB-203ENST00000463370 BAG6P46379 1132 aa14.68□□□□□ -0.06
VAPB-203ENST00000463370 GNAQP50148 359 aa14.68□□□□□ -0.06
VAPB-203ENST00000463370 FOXP4Q8IVH2 680 aaPredicted RBP14.68□□□□□ -0.06
VAPB-203ENST00000463370 TIGD1Q96MW7 591 aa14.68□□□□□ -0.06
VAPB-203ENST00000463370 UBA5Q9GZZ9 404 aa14.68□□□□□ -0.06
VAPB-203ENST00000463370 MYH6P13533 1939 aa14.68□□□□□ -0.06
VAPB-203ENST00000463370 FRMPD2Q68DX3 1309 aaPredicted RBP14.68□□□□□ -0.06
VAPB-203ENST00000463370 STXBP3O00186 592 aa14.68□□□□□ -0.06
VAPB-203ENST00000463370 TTC38Q5R3I4 469 aa14.68□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms