RNA–Protein interactions for RNA: ENST00000462276.1

RTF1-202, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 4

Gene RTF1, Length 485 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-202ENST00000462276 SLURP2P0DP57 97 aa12.45□□□□□ -0.42
RTF1-202ENST00000462276 SNHG28P0DPA3 235 aa12.45□□□□□ -0.42
RTF1-202ENST00000462276 PTPRAP18433 802 aa12.45□□□□□ -0.42
RTF1-202ENST00000462276 FSTL1Q12841 308 aa12.45□□□□□ -0.42
RTF1-202ENST00000462276 RTN1Q16799 776 aa12.45□□□□□ -0.42
RTF1-202ENST00000462276 ASPRV1Q53RT3 343 aa12.45□□□□□ -0.42
RTF1-202ENST00000462276 GPATCH4Q5T3I0 446 aaKnown RBP12.45□□□□□ -0.42
RTF1-202ENST00000462276 PPP1R3FQ6ZSY5 799 aaPredicted RBP12.45□□□□□ -0.42
RTF1-202ENST00000462276 ERO1BQ86YB8 467 aa12.45□□□□□ -0.42
RTF1-202ENST00000462276 SIAH1Q8IUQ4 282 aa12.45□□□□□ -0.42
RTF1-202ENST00000462276 ZNF280CQ8ND82 737 aa12.45□□□□□ -0.42
RTF1-202ENST00000462276 DCAF4Q8WV16 495 aa12.45□□□□□ -0.42
RTF1-202ENST00000462276 LPAR1Q92633 364 aa12.45□□□□□ -0.42
RTF1-202ENST00000462276 GMCL1Q96IK5 515 aa12.45□□□□□ -0.42
RTF1-202ENST00000462276 GBA2Q9HCG7 927 aaPredicted RBP12.45□□□□□ -0.42
RTF1-202ENST00000462276 RBM27Q9P2N5 1060 aaKnown RBP12.45□□□□□ -0.42
RTF1-202ENST00000462276 NAP1L2Q9ULW6 460 aaPredicted RBP12.45□□□□□ -0.42
RTF1-202ENST00000462276 HPS5Q9UPZ3 1129 aa12.45□□□□□ -0.42
RTF1-202ENST00000462276 KIF3AQ9Y496 699 aa12.45□□□□□ -0.42
RTF1-202ENST00000462276 ECM29Q5VYK3 1845 aa12.45□□□□□ -0.42
RTF1-202ENST00000462276 GOLGA8AA7E2F4 631 aa12.44□□□□□ -0.42
RTF1-202ENST00000462276 USP17L10C9JJH3 530 aa12.44□□□□□ -0.42
RTF1-202ENST00000462276 F5H6K3 240 aa12.44□□□□□ -0.42
RTF1-202ENST00000462276 TRAF5O00463 557 aa12.44□□□□□ -0.42
RTF1-202ENST00000462276 CXCL11O14625 94 aa12.44□□□□□ -0.42
RTF1-202ENST00000462276 CELF2O95319 508 aaKnown RBP12.44□□□□□ -0.42
RTF1-202ENST00000462276 JAG1P78504 1218 aa12.44□□□□□ -0.42
RTF1-202ENST00000462276 HMGN5P82970 282 aaKnown RBP12.44□□□□□ -0.42
RTF1-202ENST00000462276 ATP2B2Q01814 1243 aa12.44□□□□□ -0.42
RTF1-202ENST00000462276 PPATQ06203 517 aa12.44□□□□□ -0.42
RTF1-202ENST00000462276 KLRC3Q07444 240 aa12.44□□□□□ -0.42
RTF1-202ENST00000462276 VGLL4Q14135 290 aa12.44□□□□□ -0.42
RTF1-202ENST00000462276 GRM4Q14833 912 aa12.44□□□□□ -0.42
RTF1-202ENST00000462276 MICU3Q86XE3 530 aa12.44□□□□□ -0.42
RTF1-202ENST00000462276 NUP133Q8WUM0 1156 aa12.44□□□□□ -0.42
RTF1-202ENST00000462276 ZKSCAN4Q969J2 545 aaPredicted RBP12.44□□□□□ -0.42
RTF1-202ENST00000462276 SENP2Q9HC62 589 aa12.44□□□□□ -0.42
RTF1-202ENST00000462276 SSC5DA1L4H1 1573 aa12.43□□□□□ -0.42
RTF1-202ENST00000462276 PALM3A6NDB9 673 aaPredicted RBP12.43□□□□□ -0.42
RTF1-202ENST00000462276 SPDYE5A6NIY4 337 aa12.43□□□□□ -0.42
RTF1-202ENST00000462276 PARP1P09874 1014 aaKnown RBP12.43□□□□□ -0.42
RTF1-202ENST00000462276 PDHBP11177 359 aa12.43□□□□□ -0.42
RTF1-202ENST00000462276 HSPA6P17066 643 aa12.43□□□□□ -0.42
RTF1-202ENST00000462276 BACE1P56817 501 aa12.43□□□□□ -0.42
RTF1-202ENST00000462276 SCRN1Q12765 414 aa12.43□□□□□ -0.42
RTF1-202ENST00000462276 SLFN13Q68D06 897 aa12.43□□□□□ -0.42
RTF1-202ENST00000462276 NOL8Q76FK4 1167 aaKnown RBP12.43□□□□□ -0.42
RTF1-202ENST00000462276 RGS22Q8NE09 1264 aa12.43□□□□□ -0.42
RTF1-202ENST00000462276 SLC10A4Q96EP9 437 aa12.43□□□□□ -0.42
RTF1-202ENST00000462276 FEZ1Q99689 392 aa12.43□□□□□ -0.42
RTF1-202ENST00000462276 LARP6Q9BRS8 491 aaKnown RBP12.43□□□□□ -0.42
RTF1-202ENST00000462276 VCPKMTQ9H867 229 aa12.43□□□□□ -0.42
RTF1-202ENST00000462276 SNCAIPQ9Y6H5 919 aa12.43□□□□□ -0.42
RTF1-202ENST00000462276 ZHX2Q9Y6X8 837 aa12.43□□□□□ -0.42
RTF1-202ENST00000462276 LAMB1P07942 1786 aa12.43□□□□□ -0.42
RTF1-202ENST00000462276 CDK5RAP2Q96SN8 1893 aa12.42□□□□□ -0.42
RTF1-202ENST00000462276 PLA2G6O60733 806 aa12.42□□□□□ -0.42
RTF1-202ENST00000462276 IFNAR1P17181 557 aa12.42□□□□□ -0.42
RTF1-202ENST00000462276 SLC1A4P43007 532 aa12.42□□□□□ -0.42
RTF1-202ENST00000462276 SPP2Q13103 211 aa12.42□□□□□ -0.42
RTF1-202ENST00000462276 PRKG1Q13976 671 aa12.42□□□□□ -0.42
RTF1-202ENST00000462276 USP17L2Q6R6M4 530 aa12.42□□□□□ -0.42
RTF1-202ENST00000462276 TRIM22Q8IYM9 498 aa12.42□□□□□ -0.42
RTF1-202ENST00000462276 LRRC47Q8N1G4 583 aaKnown RBP12.42□□□□□ -0.42
RTF1-202ENST00000462276 C12orf42Q96LP6 360 aa12.42□□□□□ -0.42
RTF1-202ENST00000462276 AFG3L2Q9Y4W6 797 aa12.42□□□□□ -0.42
RTF1-202ENST00000462276 PASKQ96RG2 1323 aa12.41□□□□□ -0.42
RTF1-202ENST00000462276 A0A1W2PRG0 241 aa12.41□□□□□ -0.42
RTF1-202ENST00000462276 UBE2Q2LH0YL09 131 aa12.41□□□□□ -0.42
RTF1-202ENST00000462276 NDUFB10O96000 172 aa12.41□□□□□ -0.42
RTF1-202ENST00000462276 PDCP20941 246 aa12.41□□□□□ -0.42
RTF1-202ENST00000462276 CCT2P78371 535 aaKnown RBP12.41□□□□□ -0.42
RTF1-202ENST00000462276 AKAP17AQ02040 695 aaKnown RBP12.41□□□□□ -0.42
RTF1-202ENST00000462276 ZNF543Q08ER8 600 aa12.41□□□□□ -0.42
RTF1-202ENST00000462276 STK3Q13188 491 aa12.41□□□□□ -0.42
RTF1-202ENST00000462276 PPIL2Q13356 520 aa12.41□□□□□ -0.42
RTF1-202ENST00000462276 SH3D19Q5HYK7 790 aa12.41□□□□□ -0.42
RTF1-202ENST00000462276 CST9Q5W186 159 aa12.41□□□□□ -0.42
RTF1-202ENST00000462276 DLK2Q6UY11 383 aa12.41□□□□□ -0.42
RTF1-202ENST00000462276 TMTC3Q6ZXV5 915 aa12.41□□□□□ -0.42
RTF1-202ENST00000462276 CCDC83Q8IWF9 413 aa12.41□□□□□ -0.42
RTF1-202ENST00000462276 FAM177A1Q8N128 213 aaPredicted RBP12.41□□□□□ -0.42
RTF1-202ENST00000462276 NECAB1Q8N987 351 aa12.41□□□□□ -0.42
RTF1-202ENST00000462276 ACER1Q8TDN7 264 aa12.41□□□□□ -0.42
RTF1-202ENST00000462276 CHURC1Q8WUH1 139 aa12.41□□□□□ -0.42
RTF1-202ENST00000462276 WASF1Q92558 559 aa12.41□□□□□ -0.42
RTF1-202ENST00000462276 SPZ1Q9BXG8 430 aa12.41□□□□□ -0.42
RTF1-202ENST00000462276 ZNF408Q9H9D4 720 aa12.41□□□□□ -0.42
RTF1-202ENST00000462276 FAM217BQ9NTX9 383 aaPredicted RBP12.41□□□□□ -0.42
RTF1-202ENST00000462276 SMC3Q9UQE7 1217 aa12.41□□□□□ -0.42
RTF1-202ENST00000462276 KLRF2D3W0D1 207 aa12.4□□□□□ -0.42
RTF1-202ENST00000462276 WDR46O15213 610 aaKnown RBP12.4□□□□□ -0.42
RTF1-202ENST00000462276 LARGE1O95461 756 aa12.4□□□□□ -0.42
RTF1-202ENST00000462276 FDX1P10109 184 aa12.4□□□□□ -0.42
RTF1-202ENST00000462276 BMP3P12645 472 aa12.4□□□□□ -0.42
RTF1-202ENST00000462276 ADD1P35611 737 aaKnown RBP12.4□□□□□ -0.42
RTF1-202ENST00000462276 TRAF1Q13077 416 aa12.4□□□□□ -0.42
RTF1-202ENST00000462276 NTRK3Q16288 839 aa12.4□□□□□ -0.42
RTF1-202ENST00000462276 SHROOM1Q2M3G4 852 aaPredicted RBP12.4□□□□□ -0.42
RTF1-202ENST00000462276 FASTKD5Q7L8L6 764 aaKnown RBP12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms