RNA–Protein interactions for RNA: ENST00000457845.4

TRAPPC12-212, Transcript of trafficking protein particle complex 12, humanhuman

TSL 4

Gene TRAPPC12, Length 579 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-212ENST00000457845 CCL15Q16663 113 aa13.85□□□□□ -0.19
TRAPPC12-212ENST00000457845 GPAT2Q6NUI2 795 aa13.85□□□□□ -0.19
TRAPPC12-212ENST00000457845 DHX32Q7L7V1 743 aaKnown RBP13.85□□□□□ -0.19
TRAPPC12-212ENST00000457845 ENAHQ8N8S7 591 aaPredicted RBP13.85□□□□□ -0.19
TRAPPC12-212ENST00000457845 IGDCC4Q8TDY8 1250 aa13.85□□□□□ -0.19
TRAPPC12-212ENST00000457845 TMEM47Q9BQJ4 181 aa13.85□□□□□ -0.19
TRAPPC12-212ENST00000457845 ZKSCAN3Q9BRR0 538 aa13.85□□□□□ -0.19
TRAPPC12-212ENST00000457845 ZCCHC17Q9NP64 241 aaKnown RBP13.85□□□□□ -0.19
TRAPPC12-212ENST00000457845 STX8Q9UNK0 236 aa13.85□□□□□ -0.19
TRAPPC12-212ENST00000457845 TNKSO95271 1327 aa13.85□□□□□ -0.19
TRAPPC12-212ENST00000457845 IGF2BP3O00425 579 aaKnown RBP eCLIP13.84□□□□□ -0.19
TRAPPC12-212ENST00000457845 TOP1P11387 765 aaKnown RBP13.84□□□□□ -0.19
TRAPPC12-212ENST00000457845 PSMA5P28066 241 aa13.84□□□□□ -0.19
TRAPPC12-212ENST00000457845 HOXA7P31268 230 aaPredicted RBP13.84□□□□□ -0.19
TRAPPC12-212ENST00000457845 RBM25P49756 843 aaKnown RBP13.84□□□□□ -0.19
TRAPPC12-212ENST00000457845 DGKZQ13574 1117 aa13.84□□□□□ -0.19
TRAPPC12-212ENST00000457845 KIAA1755Q5JYT7 1200 aa13.84□□□□□ -0.19
TRAPPC12-212ENST00000457845 ANKRD23Q86SG2 305 aa13.84□□□□□ -0.19
TRAPPC12-212ENST00000457845 IFNL1Q8IU54 200 aa13.84□□□□□ -0.19
TRAPPC12-212ENST00000457845 FBXL16Q8N461 479 aa13.84□□□□□ -0.19
TRAPPC12-212ENST00000457845 JMYQ8N9B5 988 aa13.84□□□□□ -0.19
TRAPPC12-212ENST00000457845 GMCL1P1Q8NEA9 526 aa13.84□□□□□ -0.19
TRAPPC12-212ENST00000457845 LPAR1Q92633 364 aa13.84□□□□□ -0.19
TRAPPC12-212ENST00000457845 TMEM87BQ96K49 555 aa13.84□□□□□ -0.19
TRAPPC12-212ENST00000457845 UBAC1Q9BSL1 405 aa13.84□□□□□ -0.19
TRAPPC12-212ENST00000457845 ZSWIM6Q9HCJ5 1215 aa13.84□□□□□ -0.19
TRAPPC12-212ENST00000457845 SLC45A1Q9Y2W3 748 aa13.84□□□□□ -0.19
TRAPPC12-212ENST00000457845 COL11A1P12107 1806 aaPredicted RBP13.83□□□□□ -0.2
TRAPPC12-212ENST00000457845 BTBD19C9JJ37 291 aa13.83□□□□□ -0.2
TRAPPC12-212ENST00000457845 F5H6K3 240 aa13.83□□□□□ -0.2
TRAPPC12-212ENST00000457845 PRC1O43663 620 aa13.83□□□□□ -0.2
TRAPPC12-212ENST00000457845 LIFRP42702 1097 aa13.83□□□□□ -0.2
TRAPPC12-212ENST00000457845 ATP2B2Q01814 1243 aa13.83□□□□□ -0.2
TRAPPC12-212ENST00000457845 KLRC3Q07444 240 aa13.83□□□□□ -0.2
TRAPPC12-212ENST00000457845 CHST3Q7LGC8 479 aa13.83□□□□□ -0.2
TRAPPC12-212ENST00000457845 FAM43AQ8N2R8 423 aa13.83□□□□□ -0.2
TRAPPC12-212ENST00000457845 JAKMIP1Q96N16 626 aaKnown RBP13.83□□□□□ -0.2
TRAPPC12-212ENST00000457845 FEZ1Q99689 392 aa13.83□□□□□ -0.2
TRAPPC12-212ENST00000457845 GOPCQ9HD26 462 aa13.83□□□□□ -0.2
TRAPPC12-212ENST00000457845 TMOD4Q9NZQ9 345 aa13.83□□□□□ -0.2
TRAPPC12-212ENST00000457845 AGTPBP1Q9UPW5 1226 aa13.83□□□□□ -0.2
TRAPPC12-212ENST00000457845 MYH6P13533 1939 aa13.82□□□□□ -0.2
TRAPPC12-212ENST00000457845 IFIT3O14879 490 aaKnown RBP13.82□□□□□ -0.2
TRAPPC12-212ENST00000457845 WDR46O15213 610 aaKnown RBP13.82□□□□□ -0.2
TRAPPC12-212ENST00000457845 VCAM1P19320 739 aa13.82□□□□□ -0.2
TRAPPC12-212ENST00000457845 RPS6KB1P23443 525 aa13.82□□□□□ -0.2
TRAPPC12-212ENST00000457845 SART3Q15020 963 aaKnown RBP13.82□□□□□ -0.2
TRAPPC12-212ENST00000457845 ZYXQ15942 572 aaKnown RBP13.82□□□□□ -0.2
TRAPPC12-212ENST00000457845 TREML2Q5T2D2 321 aa13.82□□□□□ -0.2
TRAPPC12-212ENST00000457845 BLOC1S2Q6QNY1 142 aa13.82□□□□□ -0.2
TRAPPC12-212ENST00000457845 GADL1Q6ZQY3 521 aa13.82□□□□□ -0.2
TRAPPC12-212ENST00000457845 LRRC47Q8N1G4 583 aaKnown RBP13.82□□□□□ -0.2
TRAPPC12-212ENST00000457845 CFHR5Q9BXR6 569 aa13.82□□□□□ -0.2
TRAPPC12-212ENST00000457845 AGXT2Q9BYV1 514 aa13.82□□□□□ -0.2
TRAPPC12-212ENST00000457845 C22orf23Q9BZE7 217 aa13.82□□□□□ -0.2
TRAPPC12-212ENST00000457845 LY9Q9HBG7 655 aa13.82□□□□□ -0.2
TRAPPC12-212ENST00000457845 CEP350Q5VT06 3117 aa13.81□□□□□ -0.2
TRAPPC12-212ENST00000457845 A0A0G2JMZ2 1700 aa13.81□□□□□ -0.2
TRAPPC12-212ENST00000457845 ERICH2A1L162 156 aa13.81□□□□□ -0.2
TRAPPC12-212ENST00000457845 SH2B2O14492 632 aaPredicted RBP13.81□□□□□ -0.2
TRAPPC12-212ENST00000457845 NDUFB10O96000 172 aa13.81□□□□□ -0.2
TRAPPC12-212ENST00000457845 ALDH1A1P00352 501 aa13.81□□□□□ -0.2
TRAPPC12-212ENST00000457845 SNHG28P0DPA3 235 aa13.81□□□□□ -0.2
TRAPPC12-212ENST00000457845 CASTP20810 708 aaKnown RBP13.81□□□□□ -0.2
TRAPPC12-212ENST00000457845 WTAPQ15007 396 aa13.81□□□□□ -0.2
TRAPPC12-212ENST00000457845 IFIT1BQ5T764 474 aaKnown RBP13.81□□□□□ -0.2
TRAPPC12-212ENST00000457845 OTUD7BQ6GQQ9 843 aa13.81□□□□□ -0.2
TRAPPC12-212ENST00000457845 CATSPERGQ6ZRH7 1159 aa13.81□□□□□ -0.2
TRAPPC12-212ENST00000457845 RUFY3Q7L099 469 aa13.81□□□□□ -0.2
TRAPPC12-212ENST00000457845 SGMS1Q86VZ5 419 aa13.81□□□□□ -0.2
TRAPPC12-212ENST00000457845 TMTC2Q8N394 836 aa13.81□□□□□ -0.2
TRAPPC12-212ENST00000457845 GMCL1Q96IK5 515 aa13.81□□□□□ -0.2
TRAPPC12-212ENST00000457845 KIF2CQ99661 725 aa13.81□□□□□ -0.2
TRAPPC12-212ENST00000457845 SENP2Q9HC62 589 aa13.81□□□□□ -0.2
TRAPPC12-212ENST00000457845 USP17L15C9J2P7 530 aa13.8□□□□□ -0.2
TRAPPC12-212ENST00000457845 USP17L13C9JLJ4 530 aa13.8□□□□□ -0.2
TRAPPC12-212ENST00000457845 USP17L11C9JVI0 530 aa13.8□□□□□ -0.2
TRAPPC12-212ENST00000457845 USP17L18D6R9N7 530 aa13.8□□□□□ -0.2
TRAPPC12-212ENST00000457845 USP17L22D6RA61 530 aa13.8□□□□□ -0.2
TRAPPC12-212ENST00000457845 USP17L17D6RBQ6 530 aa13.8□□□□□ -0.2
TRAPPC12-212ENST00000457845 USP17L19D6RCP7 530 aa13.8□□□□□ -0.2
TRAPPC12-212ENST00000457845 USP17L20D6RJB6 530 aa13.8□□□□□ -0.2
TRAPPC12-212ENST00000457845 PDHXO00330 501 aa13.8□□□□□ -0.2
TRAPPC12-212ENST00000457845 CPA1P15085 419 aa13.8□□□□□ -0.2
TRAPPC12-212ENST00000457845 MAP2K1Q02750 393 aaPredicted RBP13.8□□□□□ -0.2
TRAPPC12-212ENST00000457845 USP17L24Q0WX57 530 aa13.8□□□□□ -0.2
TRAPPC12-212ENST00000457845 PABPC4Q13310 644 aaKnown RBP eCLIP13.8□□□□□ -0.2
TRAPPC12-212ENST00000457845 TMEM67Q5HYA8 995 aa13.8□□□□□ -0.2
TRAPPC12-212ENST00000457845 SLFN13Q68D06 897 aa13.8□□□□□ -0.2
TRAPPC12-212ENST00000457845 PNMA1Q8ND90 353 aa13.8□□□□□ -0.2
TRAPPC12-212ENST00000457845 ALDH8A1Q9H2A2 487 aaPredicted RBP13.8□□□□□ -0.2
TRAPPC12-212ENST00000457845 KAT14Q9H8E8 782 aa13.8□□□□□ -0.2
TRAPPC12-212ENST00000457845 UPF2Q9HAU5 1272 aaKnown RBP13.8□□□□□ -0.2
TRAPPC12-212ENST00000457845 GPHNQ9NQX3 736 aaPredicted RBP13.8□□□□□ -0.2
TRAPPC12-212ENST00000457845 WBP1LQ9NX94 342 aa13.8□□□□□ -0.2
TRAPPC12-212ENST00000457845 CYP46A1Q9Y6A2 500 aa13.8□□□□□ -0.2
TRAPPC12-212ENST00000457845 MGAMO43451 1857 aa13.8□□□□□ -0.2
TRAPPC12-212ENST00000457845 BAZ2BQ9UIF8 2168 aaKnown RBP13.79□□□□□ -0.2
TRAPPC12-212ENST00000457845 CA12O43570 354 aa13.79□□□□□ -0.2
TRAPPC12-212ENST00000457845 PLA2G6O60733 806 aa13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms