RNA–Protein interactions for RNA: ENST00000457212.5

FAM3A-217, Transcript of family with sequence similarity 3 member A, humanhuman

TSL 5

Gene FAM3A, Length 905 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-217ENST00000457212 VCPKMTQ9H867 229 aa24.19■■□□□ 1.46
FAM3A-217ENST00000457212 EMILIN3Q9NT22 766 aa24.19■■□□□ 1.46
FAM3A-217ENST00000457212 ALDH1A1P00352 501 aa24.18■■□□□ 1.46
FAM3A-217ENST00000457212 TOP1P11387 765 aaKnown RBP24.18■■□□□ 1.46
FAM3A-217ENST00000457212 PSMA5P28066 241 aa24.18■■□□□ 1.46
FAM3A-217ENST00000457212 ANAPC15P60006 121 aa24.18■■□□□ 1.46
FAM3A-217ENST00000457212 ZYXQ15942 572 aaKnown RBP24.18■■□□□ 1.46
FAM3A-217ENST00000457212 PTPN18Q99952 460 aa24.18■■□□□ 1.46
FAM3A-217ENST00000457212 AGTPBP1Q9UPW5 1226 aa24.18■■□□□ 1.46
FAM3A-217ENST00000457212 SLC45A1Q9Y2W3 748 aa24.18■■□□□ 1.46
FAM3A-217ENST00000457212 CEP350Q5VT06 3117 aa24.17■■□□□ 1.46
FAM3A-217ENST00000457212 TNKSO95271 1327 aa24.17■■□□□ 1.46
FAM3A-217ENST00000457212 WDR19Q8NEZ3 1342 aa24.17■■□□□ 1.46
FAM3A-217ENST00000457212 ERICH2A1L162 156 aa24.17■■□□□ 1.46
FAM3A-217ENST00000457212 BTBD19C9JJ37 291 aa24.17■■□□□ 1.46
FAM3A-217ENST00000457212 IGF2BP3O00425 579 aaKnown RBP eCLIP24.17■■□□□ 1.46
FAM3A-217ENST00000457212 PABPC4Q13310 644 aaKnown RBP eCLIP24.17■■□□□ 1.463e-6■■■□□ 15.2
FAM3A-217ENST00000457212 ADCK5Q3MIX3 580 aa24.17■■□□□ 1.46
FAM3A-217ENST00000457212 RCSD1Q6JBY9 416 aa24.17■■□□□ 1.46
FAM3A-217ENST00000457212 GPAT2Q6NUI2 795 aa24.17■■□□□ 1.46
FAM3A-217ENST00000457212 JMYQ8N9B5 988 aa24.17■■□□□ 1.46
FAM3A-217ENST00000457212 GMCL1P1Q8NEA9 526 aa24.17■■□□□ 1.46
FAM3A-217ENST00000457212 PRC1O43663 620 aa24.16■■□□□ 1.46
FAM3A-217ENST00000457212 ANTXR2P58335 489 aa24.16■■□□□ 1.46
FAM3A-217ENST00000457212 DHX32Q7L7V1 743 aaKnown RBP24.16■■□□□ 1.46
FAM3A-217ENST00000457212 ENAHQ8N8S7 591 aaPredicted RBP24.16■■□□□ 1.46
FAM3A-217ENST00000457212 TMEM87BQ96K49 555 aa24.16■■□□□ 1.46
FAM3A-217ENST00000457212 JAKMIP1Q96N16 626 aaKnown RBP24.16■■□□□ 1.46
FAM3A-217ENST00000457212 TMEM47Q9BQJ4 181 aa24.16■■□□□ 1.46
FAM3A-217ENST00000457212 UPF2Q9HAU5 1272 aaKnown RBP24.16■■□□□ 1.46
FAM3A-217ENST00000457212 F5H6K3 240 aa24.15■■□□□ 1.46
FAM3A-217ENST00000457212 IFIT3O14879 490 aaKnown RBP24.15■■□□□ 1.46
FAM3A-217ENST00000457212 VCAM1P19320 739 aa24.15■■□□□ 1.46
FAM3A-217ENST00000457212 KLRC3Q07444 240 aa24.15■■□□□ 1.46
FAM3A-217ENST00000457212 DGKZQ13574 1117 aa24.15■■□□□ 1.46
FAM3A-217ENST00000457212 SEC23AQ15436 765 aa24.15■■□□□ 1.46
FAM3A-217ENST00000457212 LRRC47Q8N1G4 583 aaKnown RBP24.15■■□□□ 1.46
FAM3A-217ENST00000457212 FAM43AQ8N2R8 423 aa24.15■■□□□ 1.46
FAM3A-217ENST00000457212 BACH2Q9BYV9 841 aa24.15■■□□□ 1.46
FAM3A-217ENST00000457212 TM6SF1Q9BZW5 370 aa24.15■■□□□ 1.46
FAM3A-217ENST00000457212 PDHXO00330 501 aa24.14■■□□□ 1.45
FAM3A-217ENST00000457212 WDR46O15213 610 aaKnown RBP24.14■■□□□ 1.45
FAM3A-217ENST00000457212 HOXA7P31268 230 aaPredicted RBP24.14■■□□□ 1.45
FAM3A-217ENST00000457212 TREML2Q5T2D2 321 aa24.14■■□□□ 1.45
FAM3A-217ENST00000457212 BLOC1S2Q6QNY1 142 aa24.14■■□□□ 1.45
FAM3A-217ENST00000457212 IL17RAQ96F46 866 aa24.14■■□□□ 1.45
FAM3A-217ENST00000457212 EXOSC10Q01780 885 aaKnown RBP24.13■■□□□ 1.45
FAM3A-217ENST00000457212 TMEM67Q5HYA8 995 aa24.13■■□□□ 1.45
FAM3A-217ENST00000457212 IFIT1BQ5T764 474 aaKnown RBP24.13■■□□□ 1.45
FAM3A-217ENST00000457212 CHST3Q7LGC8 479 aa24.13■■□□□ 1.45
FAM3A-217ENST00000457212 IGDCC4Q8TDY8 1250 aa24.13■■□□□ 1.45
FAM3A-217ENST00000457212 BEGAINQ9BUH8 593 aa24.13■■□□□ 1.45
FAM3A-217ENST00000457212 KAT14Q9H8E8 782 aa24.13■■□□□ 1.45
FAM3A-217ENST00000457212 PNMA3Q9UL41 463 aa24.13■■□□□ 1.45
FAM3A-217ENST00000457212 USP17L15C9J2P7 530 aa24.12■■□□□ 1.45
FAM3A-217ENST00000457212 USP17L13C9JLJ4 530 aa24.12■■□□□ 1.45
FAM3A-217ENST00000457212 USP17L11C9JVI0 530 aa24.12■■□□□ 1.45
FAM3A-217ENST00000457212 USP17L18D6R9N7 530 aa24.12■■□□□ 1.45
FAM3A-217ENST00000457212 USP17L22D6RA61 530 aa24.12■■□□□ 1.45
FAM3A-217ENST00000457212 USP17L17D6RBQ6 530 aa24.12■■□□□ 1.45
FAM3A-217ENST00000457212 USP17L19D6RCP7 530 aa24.12■■□□□ 1.45
FAM3A-217ENST00000457212 USP17L20D6RJB6 530 aa24.12■■□□□ 1.45
FAM3A-217ENST00000457212 CA12O43570 354 aa24.12■■□□□ 1.45
FAM3A-217ENST00000457212 RAD21O60216 631 aa24.12■■□□□ 1.45
FAM3A-217ENST00000457212 NDUFB10O96000 172 aa24.12■■□□□ 1.45
FAM3A-217ENST00000457212 OSBPP22059 807 aa24.12■■□□□ 1.45
FAM3A-217ENST00000457212 USP17L24Q0WX57 530 aa24.12■■□□□ 1.45
FAM3A-217ENST00000457212 WTAPQ15007 396 aa24.12■■□□□ 1.45
FAM3A-217ENST00000457212 KIAA1755Q5JYT7 1200 aa24.12■■□□□ 1.45
FAM3A-217ENST00000457212 SLFN13Q68D06 897 aa24.12■■□□□ 1.45
FAM3A-217ENST00000457212 SPICE1Q8N0Z3 855 aa24.12■■□□□ 1.45
FAM3A-217ENST00000457212 TMTC2Q8N394 836 aa24.12■■□□□ 1.45
FAM3A-217ENST00000457212 GMCL1Q96IK5 515 aa24.12■■□□□ 1.45
FAM3A-217ENST00000457212 WBP1LQ9NX94 342 aa24.12■■□□□ 1.45
FAM3A-217ENST00000457212 SAGE1Q9NXZ1 904 aa24.12■■□□□ 1.45
FAM3A-217ENST00000457212 CASTP20810 708 aaKnown RBP24.11■■□□□ 1.45
FAM3A-217ENST00000457212 PARK7Q99497 189 aaKnown RBP24.11■■□□□ 1.45
FAM3A-217ENST00000457212 CFHR5Q9BXR6 569 aa24.11■■□□□ 1.45
FAM3A-217ENST00000457212 C22orf23Q9BZE7 217 aa24.11■■□□□ 1.45
FAM3A-217ENST00000457212 RPAP3Q9H6T3 665 aaPredicted RBP24.11■■□□□ 1.45
FAM3A-217ENST00000457212 ZSWIM6Q9HCJ5 1215 aa24.11■■□□□ 1.45
FAM3A-217ENST00000457212 RNF186Q9NXI6 227 aa24.11■■□□□ 1.45
FAM3A-217ENST00000457212 SH2B2O14492 632 aaPredicted RBP24.1■■□□□ 1.45
FAM3A-217ENST00000457212 RPS6KB1P23443 525 aa24.1■■□□□ 1.45
FAM3A-217ENST00000457212 LIFRP42702 1097 aa24.1■■□□□ 1.45
FAM3A-217ENST00000457212 COL9A3Q14050 684 aaPredicted RBP24.1■■□□□ 1.45
FAM3A-217ENST00000457212 TAF1CQ15572 869 aaPredicted RBP24.1■■□□□ 1.45
FAM3A-217ENST00000457212 CATSPERGQ6ZRH7 1159 aa24.1■■□□□ 1.45
FAM3A-217ENST00000457212 PNMA1Q8ND90 353 aa24.1■■□□□ 1.45
FAM3A-217ENST00000457212 IRX3P78415 501 aaPredicted RBP24.09■■□□□ 1.45
FAM3A-217ENST00000457212 RUFY3Q7L099 469 aa24.09■■□□□ 1.45
FAM3A-217ENST00000457212 DCAF4Q8WV16 495 aa24.09■■□□□ 1.45
FAM3A-217ENST00000457212 LY9Q9HBG7 655 aa24.09■■□□□ 1.45
FAM3A-217ENST00000457212 ZFYVE28Q9HCC9 887 aa24.09■■□□□ 1.45
FAM3A-217ENST00000457212 CYP46A1Q9Y6A2 500 aa24.09■■□□□ 1.45
FAM3A-217ENST00000457212 SLC1A4P43007 532 aa24.08■■□□□ 1.45
FAM3A-217ENST00000457212 RBM25P49756 843 aaKnown RBP24.08■■□□□ 1.45
FAM3A-217ENST00000457212 FAM83BQ5T0W9 1011 aa24.08■■□□□ 1.45
FAM3A-217ENST00000457212 TANGO6Q9C0B7 1094 aa24.08■■□□□ 1.45
FAM3A-217ENST00000457212 ASCC2Q9H1I8 757 aaPredicted RBP24.08■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms