RNA–Protein interactions for RNA: ENST00000456330.1

TSC22D4-204, Transcript of TSC22 domain family member 4, humanhuman

TSL 3

Gene TSC22D4, Length 503 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSC22D4-204ENST00000456330 ARPP21Q9UBL0 812 aaPredicted RBP17.48■□□□□ 0.39
TSC22D4-204ENST00000456330 SWAP70Q9UH65 585 aa17.48■□□□□ 0.39
TSC22D4-204ENST00000456330 RPTORQ8N122 1335 aa17.47■□□□□ 0.39
TSC22D4-204ENST00000456330 EVI5O60447 810 aa17.47■□□□□ 0.39
TSC22D4-204ENST00000456330 GLRX3O76003 335 aaKnown RBP17.47■□□□□ 0.39
TSC22D4-204ENST00000456330 ERVK-9P63128 1117 aa17.47■□□□□ 0.39
TSC22D4-204ENST00000456330 ERVK-24P63145 666 aa17.47■□□□□ 0.39
TSC22D4-204ENST00000456330 ICA1Q05084 483 aa17.47■□□□□ 0.39
TSC22D4-204ENST00000456330 TRIM32Q13049 653 aa17.47■□□□□ 0.39
TSC22D4-204ENST00000456330 HDAC1Q13547 482 aaPredicted RBP17.47■□□□□ 0.39
TSC22D4-204ENST00000456330 TMEM179Q6ZVK1 233 aa17.47■□□□□ 0.39
TSC22D4-204ENST00000456330 TRIB2Q92519 343 aa17.47■□□□□ 0.39
TSC22D4-204ENST00000456330 RBPJLQ9UBG7 517 aa17.47■□□□□ 0.39
TSC22D4-204ENST00000456330 SPDYE16A6NNV3 312 aaPredicted RBP17.46■□□□□ 0.39
TSC22D4-204ENST00000456330 ERC2O15083 957 aa17.46■□□□□ 0.39
TSC22D4-204ENST00000456330 USP14P54578 494 aa17.46■□□□□ 0.39
TSC22D4-204ENST00000456330 NECAB2Q7Z6G3 386 aa17.46■□□□□ 0.39
TSC22D4-204ENST00000456330 AMOTL1Q8IY63 956 aa17.46■□□□□ 0.39
TSC22D4-204ENST00000456330 SOCS4Q8WXH5 440 aa17.46■□□□□ 0.39
TSC22D4-204ENST00000456330 DDRGK1Q96HY6 314 aa17.46■□□□□ 0.39
TSC22D4-204ENST00000456330 USP17L15C9J2P7 530 aa17.45■□□□□ 0.38
TSC22D4-204ENST00000456330 USP17L13C9JLJ4 530 aa17.45■□□□□ 0.38
TSC22D4-204ENST00000456330 USP17L11C9JVI0 530 aa17.45■□□□□ 0.38
TSC22D4-204ENST00000456330 USP17L18D6R9N7 530 aa17.45■□□□□ 0.38
TSC22D4-204ENST00000456330 USP17L22D6RA61 530 aa17.45■□□□□ 0.38
TSC22D4-204ENST00000456330 USP17L17D6RBQ6 530 aa17.45■□□□□ 0.38
TSC22D4-204ENST00000456330 USP17L19D6RCP7 530 aa17.45■□□□□ 0.38
TSC22D4-204ENST00000456330 USP17L20D6RJB6 530 aa17.45■□□□□ 0.38
TSC22D4-204ENST00000456330 XRCC5P13010 732 aaKnown RBP17.45■□□□□ 0.38
TSC22D4-204ENST00000456330 USP17L24Q0WX57 530 aa17.45■□□□□ 0.38
TSC22D4-204ENST00000456330 Q3C1V9 767 aa17.45■□□□□ 0.38
TSC22D4-204ENST00000456330 CATSPERGQ6ZRH7 1159 aa17.45■□□□□ 0.38
TSC22D4-204ENST00000456330 CCDC129Q6ZRS4 1044 aa17.45■□□□□ 0.38
TSC22D4-204ENST00000456330 SIAH1Q8IUQ4 282 aa17.45■□□□□ 0.38
TSC22D4-204ENST00000456330 SPICE1Q8N0Z3 855 aa17.45■□□□□ 0.38
TSC22D4-204ENST00000456330 USP6NLQ92738 828 aa17.45■□□□□ 0.38
TSC22D4-204ENST00000456330 LNPKQ9C0E8 428 aa17.45■□□□□ 0.38
TSC22D4-204ENST00000456330 HMX1Q9NP08 348 aaPredicted RBP17.45■□□□□ 0.38
TSC22D4-204ENST00000456330 OGDHLQ9ULD0 1010 aa17.45■□□□□ 0.38
TSC22D4-204ENST00000456330 MINDY4BA8MYZ0 360 aa17.44■□□□□ 0.38
TSC22D4-204ENST00000456330 ZFYP08048 801 aaPredicted RBP17.44■□□□□ 0.38
TSC22D4-204ENST00000456330 TDO2P48775 406 aa17.44■□□□□ 0.38
TSC22D4-204ENST00000456330 GPRC5AQ8NFJ5 357 aa17.44■□□□□ 0.38
TSC22D4-204ENST00000456330 GTF3C2Q8WUA4 911 aaPredicted RBP17.44■□□□□ 0.38
TSC22D4-204ENST00000456330 TANGO6Q9C0B7 1094 aa17.44■□□□□ 0.38
TSC22D4-204ENST00000456330 BTBD7Q9P203 1132 aa17.44■□□□□ 0.38
TSC22D4-204ENST00000456330 LAMA2P24043 3122 aaKnown RBP17.43■□□□□ 0.38
TSC22D4-204ENST00000456330 FOXP2O15409 715 aa17.43■□□□□ 0.38
TSC22D4-204ENST00000456330 RASA1P20936 1047 aa17.43■□□□□ 0.38
TSC22D4-204ENST00000456330 MAPK4P31152 587 aa17.43■□□□□ 0.38
TSC22D4-204ENST00000456330 PDE1AP54750 535 aa17.43■□□□□ 0.38
TSC22D4-204ENST00000456330 ZMYM1Q5SVZ6 1142 aa17.43■□□□□ 0.38
TSC22D4-204ENST00000456330 B4GALNT3Q6L9W6 998 aa17.43■□□□□ 0.38
TSC22D4-204ENST00000456330 GPR142Q7Z601 462 aa17.43■□□□□ 0.38
TSC22D4-204ENST00000456330 GDF15Q99988 308 aa17.43■□□□□ 0.38
TSC22D4-204ENST00000456330 NUDT12Q9BQG2 462 aa17.43■□□□□ 0.38
TSC22D4-204ENST00000456330 GNL3Q9BVP2 549 aaKnown RBP eCLIP17.43■□□□□ 0.38
TSC22D4-204ENST00000456330 SOX1O00570 391 aaPredicted RBP17.42■□□□□ 0.38
TSC22D4-204ENST00000456330 PRDM1O75626 825 aa17.42■□□□□ 0.38
TSC22D4-204ENST00000456330 IGHDP01880 384 aa17.42■□□□□ 0.38
TSC22D4-204ENST00000456330 EEF2P13639 858 aaKnown RBP17.42■□□□□ 0.38
TSC22D4-204ENST00000456330 CYP2B6P20813 491 aa17.42■□□□□ 0.38
TSC22D4-204ENST00000456330 BMP8BP34820 402 aa17.42■□□□□ 0.38
TSC22D4-204ENST00000456330 IRX6P78412 446 aaPredicted RBP17.42■□□□□ 0.38
TSC22D4-204ENST00000456330 ATP2B2Q01814 1243 aa17.42■□□□□ 0.38
TSC22D4-204ENST00000456330 SBK1Q52WX2 424 aa17.42■□□□□ 0.38
TSC22D4-204ENST00000456330 MORN1Q5T089 497 aa17.42■□□□□ 0.38
TSC22D4-204ENST00000456330 TRMT44Q8IYL2 757 aaKnown RBP17.42■□□□□ 0.38
TSC22D4-204ENST00000456330 NBPF3Q9H094 633 aa17.42■□□□□ 0.38
TSC22D4-204ENST00000456330 ARHGEF10LQ9HCE6 1279 aa17.42■□□□□ 0.38
TSC22D4-204ENST00000456330 ZBTB47Q9UFB7 747 aaPredicted RBP17.42■□□□□ 0.38
TSC22D4-204ENST00000456330 MCM3APO60318 1980 aa17.41■□□□□ 0.38
TSC22D4-204ENST00000456330 APPP05067 770 aa17.41■□□□□ 0.38
TSC22D4-204ENST00000456330 PRKAR2AP13861 404 aaKnown RBP17.41■□□□□ 0.38
TSC22D4-204ENST00000456330 CCL14Q16627 93 aa17.41■□□□□ 0.38
TSC22D4-204ENST00000456330 WDR78Q5VTH9 848 aa17.41■□□□□ 0.38
TSC22D4-204ENST00000456330 SAMD1Q6SPF0 538 aaPredicted RBP17.41■□□□□ 0.38
TSC22D4-204ENST00000456330 VCPKMTQ9H867 229 aa17.41■□□□□ 0.38
TSC22D4-204ENST00000456330 STAP2Q9UGK3 403 aa17.41■□□□□ 0.38
TSC22D4-204ENST00000456330 TMX2Q9Y320 296 aa17.41■□□□□ 0.38
TSC22D4-204ENST00000456330 RABGAP1Q9Y3P9 1069 aa17.41■□□□□ 0.38
TSC22D4-204ENST00000456330 PFASO15067 1338 aa17.41■□□□□ 0.38
TSC22D4-204ENST00000456330 A0A0C4DFX4 3053 aa17.41■□□□□ 0.38
TSC22D4-204ENST00000456330 GIMAP6Q6P9H5 292 aa17.4■□□□□ 0.38
TSC22D4-204ENST00000456330 LBX2Q6XYB7 198 aa17.4■□□□□ 0.38
TSC22D4-204ENST00000456330 SMC5Q8IY18 1101 aa17.4■□□□□ 0.38
TSC22D4-204ENST00000456330 C7orf61Q8IZ16 206 aa17.4■□□□□ 0.38
TSC22D4-204ENST00000456330 IFNL3Q8IZI9 196 aa17.4■□□□□ 0.38
TSC22D4-204ENST00000456330 CCDC17Q96LX7 622 aa17.4■□□□□ 0.38
TSC22D4-204ENST00000456330 APBA2Q99767 749 aa17.4■□□□□ 0.38
TSC22D4-204ENST00000456330 C11orf49Q9H6J7 331 aa17.4■□□□□ 0.38
TSC22D4-204ENST00000456330 SUPT16HQ9Y5B9 1047 aaKnown RBP17.4■□□□□ 0.38
TSC22D4-204ENST00000456330 A0A0D9SFI3 127 aa17.39■□□□□ 0.37
TSC22D4-204ENST00000456330 RAD21O60216 631 aa17.39■□□□□ 0.37
TSC22D4-204ENST00000456330 COL6A1P12109 1028 aa17.39■□□□□ 0.37
TSC22D4-204ENST00000456330 ZKSCAN1P17029 563 aaPredicted RBP17.39■□□□□ 0.37
TSC22D4-204ENST00000456330 GNAT2P19087 354 aa17.39■□□□□ 0.37
TSC22D4-204ENST00000456330 RGS2P41220 211 aa17.39■□□□□ 0.37
TSC22D4-204ENST00000456330 CACNB2Q08289 660 aaPredicted RBP17.39■□□□□ 0.37
TSC22D4-204ENST00000456330 VPS53Q5VIR6 699 aa17.39■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms