RNA–Protein interactions for RNA: ENST00000452322.2

LINC00339-205, long intergenic non-protein coding RNA 339, humanhuman

TSL 3

Gene LINC00339, Length 1,391 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-205ENST00000452322 SEC23AQ15436 765 aa13.98□□□□□ -0.17
LINC00339-205ENST00000452322 RCSD1Q6JBY9 416 aa13.98□□□□□ -0.17
LINC00339-205ENST00000452322 BLOC1S2Q6QNY1 142 aa13.98□□□□□ -0.17
LINC00339-205ENST00000452322 USP17L2Q6R6M4 530 aa13.98□□□□□ -0.17
LINC00339-205ENST00000452322 DHX32Q7L7V1 743 aaKnown RBP13.98□□□□□ -0.17
LINC00339-205ENST00000452322 FASTKD5Q7L8L6 764 aaKnown RBP13.98□□□□□ -0.17
LINC00339-205ENST00000452322 ENAHQ8N8S7 591 aaPredicted RBP13.98□□□□□ -0.17
LINC00339-205ENST00000452322 PROCA1Q8NCQ7 364 aaPredicted RBP13.98□□□□□ -0.17
LINC00339-205ENST00000452322 ANKS1AQ92625 1134 aa13.98□□□□□ -0.17
LINC00339-205ENST00000452322 TMEM87BQ96K49 555 aa13.98□□□□□ -0.17
LINC00339-205ENST00000452322 VCPKMTQ9H867 229 aa13.98□□□□□ -0.17
LINC00339-205ENST00000452322 CCL15-CCL14A0A0B4J2E2 113 aa13.97□□□□□ -0.17
LINC00339-205ENST00000452322 IFIT3O14879 490 aaKnown RBP13.97□□□□□ -0.17
LINC00339-205ENST00000452322 TOP1P11387 765 aaKnown RBP13.97□□□□□ -0.17
LINC00339-205ENST00000452322 CASTP20810 708 aaKnown RBP13.97□□□□□ -0.17
LINC00339-205ENST00000452322 EXOSC10Q01780 885 aaKnown RBP13.97□□□□□ -0.17
LINC00339-205ENST00000452322 MOGSQ13724 837 aa13.97□□□□□ -0.17
LINC00339-205ENST00000452322 CCL15Q16663 113 aa13.97□□□□□ -0.17
LINC00339-205ENST00000452322 CHST3Q7LGC8 479 aa13.97□□□□□ -0.17
LINC00339-205ENST00000452322 GMCL1P1Q8NEA9 526 aa13.97□□□□□ -0.17
LINC00339-205ENST00000452322 BRI3BPQ8WY22 251 aa13.97□□□□□ -0.17
LINC00339-205ENST00000452322 LPAR1Q92633 364 aa13.97□□□□□ -0.17
LINC00339-205ENST00000452322 ZIC5Q96T25 663 aa13.97□□□□□ -0.17
LINC00339-205ENST00000452322 TMEM47Q9BQJ4 181 aa13.97□□□□□ -0.17
LINC00339-205ENST00000452322 ZSWIM6Q9HCJ5 1215 aa13.97□□□□□ -0.17
LINC00339-205ENST00000452322 GOPCQ9HD26 462 aa13.97□□□□□ -0.17
LINC00339-205ENST00000452322 EMILIN3Q9NT22 766 aa13.97□□□□□ -0.17
LINC00339-205ENST00000452322 TMOD4Q9NZQ9 345 aa13.97□□□□□ -0.17
LINC00339-205ENST00000452322 PCNTO95613 3336 aa13.97□□□□□ -0.17
LINC00339-205ENST00000452322 RPS6KB1P23443 525 aa13.96□□□□□ -0.17
LINC00339-205ENST00000452322 TM4SF4P48230 202 aa13.96□□□□□ -0.17
LINC00339-205ENST00000452322 DGKZQ13574 1117 aa13.96□□□□□ -0.17
LINC00339-205ENST00000452322 WTAPQ15007 396 aa13.96□□□□□ -0.17
LINC00339-205ENST00000452322 ZYXQ15942 572 aaKnown RBP13.96□□□□□ -0.17
LINC00339-205ENST00000452322 TMEM67Q5HYA8 995 aa13.96□□□□□ -0.17
LINC00339-205ENST00000452322 IFIT1BQ5T764 474 aaKnown RBP13.96□□□□□ -0.17
LINC00339-205ENST00000452322 LRRC47Q8N1G4 583 aaKnown RBP13.96□□□□□ -0.17
LINC00339-205ENST00000452322 DNAJC5GQ8N7S2 189 aa13.96□□□□□ -0.17
LINC00339-205ENST00000452322 IGDCC4Q8TDY8 1250 aa13.96□□□□□ -0.17
LINC00339-205ENST00000452322 F5H6K3 240 aa13.96□□□□□ -0.18
LINC00339-205ENST00000452322 SH2B2O14492 632 aaPredicted RBP13.96□□□□□ -0.18
LINC00339-205ENST00000452322 VCAM1P19320 739 aa13.96□□□□□ -0.18
LINC00339-205ENST00000452322 KLRC3Q07444 240 aa13.96□□□□□ -0.18
LINC00339-205ENST00000452322 GADL1Q6ZQY3 521 aa13.96□□□□□ -0.18
LINC00339-205ENST00000452322 RUFY3Q7L099 469 aa13.96□□□□□ -0.18
LINC00339-205ENST00000452322 ANKRD23Q86SG2 305 aa13.96□□□□□ -0.18
LINC00339-205ENST00000452322 TBC1D32Q96NH3 1257 aa13.96□□□□□ -0.18
LINC00339-205ENST00000452322 KAT14Q9H8E8 782 aa13.96□□□□□ -0.18
LINC00339-205ENST00000452322 LY9Q9HBG7 655 aa13.96□□□□□ -0.18
LINC00339-205ENST00000452322 AGTPBP1Q9UPW5 1226 aa13.96□□□□□ -0.18
LINC00339-205ENST00000452322 CYP46A1Q9Y6A2 500 aa13.96□□□□□ -0.18
LINC00339-205ENST00000452322 WDR46O15213 610 aaKnown RBP13.95□□□□□ -0.18
LINC00339-205ENST00000452322 NDUFB10O96000 172 aa13.95□□□□□ -0.18
LINC00339-205ENST00000452322 CPA1P15085 419 aa13.95□□□□□ -0.18
LINC00339-205ENST00000452322 LIFRP42702 1097 aa13.95□□□□□ -0.18
LINC00339-205ENST00000452322 GPAT2Q6NUI2 795 aa13.95□□□□□ -0.18
LINC00339-205ENST00000452322 IFNL1Q8IU54 200 aa13.95□□□□□ -0.18
LINC00339-205ENST00000452322 TMTC2Q8N394 836 aa13.95□□□□□ -0.18
LINC00339-205ENST00000452322 FBXL16Q8N461 479 aa13.95□□□□□ -0.18
LINC00339-205ENST00000452322 PNMA1Q8ND90 353 aa13.95□□□□□ -0.18
LINC00339-205ENST00000452322 TCEANC2Q96MN5 208 aa13.95□□□□□ -0.18
LINC00339-205ENST00000452322 PTPN18Q99952 460 aa13.95□□□□□ -0.18
LINC00339-205ENST00000452322 LRRC2Q9BYS8 371 aa13.95□□□□□ -0.18
LINC00339-205ENST00000452322 ZCCHC17Q9NP64 241 aaKnown RBP13.95□□□□□ -0.18
LINC00339-205ENST00000452322 SLC45A1Q9Y2W3 748 aa13.95□□□□□ -0.18
LINC00339-205ENST00000452322 BTBD19C9JJ37 291 aa13.94□□□□□ -0.18
LINC00339-205ENST00000452322 IGF2BP3O00425 579 aaKnown RBP eCLIP13.94□□□□□ -0.18
LINC00339-205ENST00000452322 RAD21O60216 631 aa13.94□□□□□ -0.18
LINC00339-205ENST00000452322 HOXA7P31268 230 aaPredicted RBP13.94□□□□□ -0.18
LINC00339-205ENST00000452322 PABPC4Q13310 644 aaKnown RBP eCLIP13.94□□□□□ -0.18
LINC00339-205ENST00000452322 KIAA1755Q5JYT7 1200 aa13.94□□□□□ -0.18
LINC00339-205ENST00000452322 TREML2Q5T2D2 321 aa13.94□□□□□ -0.18
LINC00339-205ENST00000452322 SLFN13Q68D06 897 aa13.94□□□□□ -0.18
LINC00339-205ENST00000452322 OTUD7BQ6GQQ9 843 aa13.94□□□□□ -0.18
LINC00339-205ENST00000452322 SGMS1Q86VZ5 419 aa13.94□□□□□ -0.18
LINC00339-205ENST00000452322 SPICE1Q8N0Z3 855 aa13.94□□□□□ -0.18
LINC00339-205ENST00000452322 FAM43AQ8N2R8 423 aa13.94□□□□□ -0.18
LINC00339-205ENST00000452322 GMCL1Q96IK5 515 aa13.94□□□□□ -0.18
LINC00339-205ENST00000452322 KIF2CQ99661 725 aa13.94□□□□□ -0.18
LINC00339-205ENST00000452322 AGXT2Q9BYV1 514 aa13.94□□□□□ -0.18
LINC00339-205ENST00000452322 UPF3BQ9BZI7 483 aaKnown RBP13.94□□□□□ -0.18
LINC00339-205ENST00000452322 ALDH1A1P00352 501 aa13.93□□□□□ -0.18
LINC00339-205ENST00000452322 SNHG28P0DPA3 235 aa13.93□□□□□ -0.18
LINC00339-205ENST00000452322 FGD1P98174 961 aa13.93□□□□□ -0.18
LINC00339-205ENST00000452322 Q6ZUG5 572 aa13.93□□□□□ -0.18
LINC00339-205ENST00000452322 DCAF4Q8WV16 495 aa13.93□□□□□ -0.18
LINC00339-205ENST00000452322 RPAP3Q9H6T3 665 aaPredicted RBP13.93□□□□□ -0.18
LINC00339-205ENST00000452322 SENP2Q9HC62 589 aa13.93□□□□□ -0.18
LINC00339-205ENST00000452322 GPHNQ9NQX3 736 aaPredicted RBP13.93□□□□□ -0.18
LINC00339-205ENST00000452322 CCDC69A6NI79 296 aa13.92□□□□□ -0.18
LINC00339-205ENST00000452322 USP17L15C9J2P7 530 aa13.92□□□□□ -0.18
LINC00339-205ENST00000452322 USP17L13C9JLJ4 530 aa13.92□□□□□ -0.18
LINC00339-205ENST00000452322 USP17L11C9JVI0 530 aa13.92□□□□□ -0.18
LINC00339-205ENST00000452322 USP17L18D6R9N7 530 aa13.92□□□□□ -0.18
LINC00339-205ENST00000452322 USP17L22D6RA61 530 aa13.92□□□□□ -0.18
LINC00339-205ENST00000452322 USP17L17D6RBQ6 530 aa13.92□□□□□ -0.18
LINC00339-205ENST00000452322 USP17L19D6RCP7 530 aa13.92□□□□□ -0.18
LINC00339-205ENST00000452322 USP17L20D6RJB6 530 aa13.92□□□□□ -0.18
LINC00339-205ENST00000452322 PDHXO00330 501 aa13.92□□□□□ -0.18
LINC00339-205ENST00000452322 PDHBP11177 359 aa13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms