RNA–Protein interactions for RNA: ENST00000449223.3

RPS28-202, Transcript of ribosomal protein S28, humanhuman

TSL 2

Gene RPS28, Length 1,523 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28-202ENST00000449223 SPRYD3Q8NCJ5 442 aa22.47■■□□□ 1.19
RPS28-202ENST00000449223 GMCL1P1Q8NEA9 526 aa22.47■■□□□ 1.19
RPS28-202ENST00000449223 CTCFLQ8NI51 663 aaPredicted RBP22.47■■□□□ 1.19
RPS28-202ENST00000449223 NUP133Q8WUM0 1156 aa22.47■■□□□ 1.19
RPS28-202ENST00000449223 WRNIP1Q96S55 665 aa22.47■■□□□ 1.19
RPS28-202ENST00000449223 GLIS2Q9BZE0 524 aaPredicted RBP22.47■■□□□ 1.19
RPS28-202ENST00000449223 CIZ1Q9ULV3 898 aaPredicted RBP22.47■■□□□ 1.19
RPS28-202ENST00000449223 SMC3Q9UQE7 1217 aa22.47■■□□□ 1.19
RPS28-202ENST00000449223 PHIPQ8WWQ0 1821 aa22.46■■□□□ 1.19
RPS28-202ENST00000449223 CPLX1O14810 134 aa22.46■■□□□ 1.19
RPS28-202ENST00000449223 INPP5BP32019 993 aa22.46■■□□□ 1.19
RPS28-202ENST00000449223 NF2P35240 595 aa22.46■■□□□ 1.19
RPS28-202ENST00000449223 FOXD4L1Q9NU39 408 aa22.46■■□□□ 1.19
RPS28-202ENST00000449223 TMX2Q9Y320 296 aa22.46■■□□□ 1.19
RPS28-202ENST00000449223 PALM3A6NDB9 673 aaPredicted RBP22.45■■□□□ 1.18
RPS28-202ENST00000449223 PDHBP11177 359 aa22.45■■□□□ 1.18
RPS28-202ENST00000449223 ARHGEF10LQ9HCE6 1279 aa22.45■■□□□ 1.18
RPS28-202ENST00000449223 MAD2L2Q9UI95 211 aa22.45■■□□□ 1.18
RPS28-202ENST00000449223 CLEC11AQ9Y240 323 aa22.45■■□□□ 1.18
RPS28-202ENST00000449223 STK36Q9NRP7 1315 aa22.45■■□□□ 1.18
RPS28-202ENST00000449223 PTPDC1A2A3K4 754 aa22.44■■□□□ 1.18
RPS28-202ENST00000449223 GJB2P29033 226 aa22.44■■□□□ 1.18
RPS28-202ENST00000449223 FUT2Q10981 343 aa22.44■■□□□ 1.18
RPS28-202ENST00000449223 DLK2Q6UY11 383 aa22.44■■□□□ 1.18
RPS28-202ENST00000449223 TMTC3Q6ZXV5 915 aa22.44■■□□□ 1.18
RPS28-202ENST00000449223 CCDC144CPQ8IYA2 1237 aa22.44■■□□□ 1.18
RPS28-202ENST00000449223 LRRC47Q8N1G4 583 aaKnown RBP22.44■■□□□ 1.18
RPS28-202ENST00000449223 SH2D4AQ9H788 454 aa22.44■■□□□ 1.18
RPS28-202ENST00000449223 A0A1W2PRG0 241 aa22.43■■□□□ 1.18
RPS28-202ENST00000449223 JAK2O60674 1132 aa22.43■■□□□ 1.18
RPS28-202ENST00000449223 PDIA4P13667 645 aaKnown RBP22.43■■□□□ 1.18
RPS28-202ENST00000449223 GNAQP50148 359 aa22.43■■□□□ 1.18
RPS28-202ENST00000449223 MAP1SQ66K74 1059 aaPredicted RBP22.43■■□□□ 1.18
RPS28-202ENST00000449223 NBPF11Q86T75 865 aa22.43■■□□□ 1.18
RPS28-202ENST00000449223 UNCXA6NJT0 531 aa22.42■■□□□ 1.18
RPS28-202ENST00000449223 SMARCA1P28370 1054 aa22.42■■□□□ 1.18
RPS28-202ENST00000449223 IREB2P48200 963 aaKnown RBP22.42■■□□□ 1.18
RPS28-202ENST00000449223 ASPRV1Q53RT3 343 aa22.42■■□□□ 1.18
RPS28-202ENST00000449223 RGS22Q8NE09 1264 aa22.42■■□□□ 1.18
RPS28-202ENST00000449223 GMCL1Q96IK5 515 aa22.42■■□□□ 1.18
RPS28-202ENST00000449223 LZTS2Q9BRK4 669 aa22.42■■□□□ 1.18
RPS28-202ENST00000449223 WDR18Q9BV38 432 aa22.42■■□□□ 1.18
RPS28-202ENST00000449223 MYH6P13533 1939 aa22.42■■□□□ 1.18
RPS28-202ENST00000449223 USP17L5A8MUK1 530 aa22.41■■□□□ 1.18
RPS28-202ENST00000449223 FDPSP14324 419 aaKnown RBP22.41■■□□□ 1.18
RPS28-202ENST00000449223 MAP3K9P80192 1104 aa22.41■■□□□ 1.18
RPS28-202ENST00000449223 PPP1R3FQ6ZSY5 799 aaPredicted RBP22.41■■□□□ 1.18
RPS28-202ENST00000449223 DCAF4Q8WV16 495 aa22.41■■□□□ 1.18
RPS28-202ENST00000449223 ZKSCAN4Q969J2 545 aaPredicted RBP22.41■■□□□ 1.18
RPS28-202ENST00000449223 RNF26Q9BY78 433 aaPredicted RBP22.41■■□□□ 1.18
RPS28-202ENST00000449223 KIF3AQ9Y496 699 aa22.41■■□□□ 1.18
RPS28-202ENST00000449223 F5H6K3 240 aa22.41■■□□□ 1.18
RPS28-202ENST00000449223 FMNL1O95466 1100 aaPredicted RBP22.41■■□□□ 1.18
RPS28-202ENST00000449223 PARP1P09874 1014 aaKnown RBP22.41■■□□□ 1.18
RPS28-202ENST00000449223 PTPRAP18433 802 aa22.41■■□□□ 1.18
RPS28-202ENST00000449223 ATP2B2Q01814 1243 aa22.41■■□□□ 1.18
RPS28-202ENST00000449223 KLRC3Q07444 240 aa22.41■■□□□ 1.18
RPS28-202ENST00000449223 ZNF543Q08ER8 600 aa22.41■■□□□ 1.18
RPS28-202ENST00000449223 GPATCH4Q5T3I0 446 aaKnown RBP22.41■■□□□ 1.18
RPS28-202ENST00000449223 ACER1Q8TDN7 264 aa22.41■■□□□ 1.18
RPS28-202ENST00000449223 PICK1Q9NRD5 415 aa22.41■■□□□ 1.18
RPS28-202ENST00000449223 FZD1Q9UP38 647 aa22.41■■□□□ 1.18
RPS28-202ENST00000449223 PLEKHA8P1O95397 391 aa22.4■■□□□ 1.18
RPS28-202ENST00000449223 PDCP20941 246 aa22.4■■□□□ 1.18
RPS28-202ENST00000449223 ECE1P42892 770 aa22.4■■□□□ 1.18
RPS28-202ENST00000449223 STAG2Q8N3U4 1231 aa22.4■■□□□ 1.18
RPS28-202ENST00000449223 KIAA1683Q9H0B3 1180 aa22.4■■□□□ 1.18
RPS28-202ENST00000449223 CHMP5Q9NZZ3 219 aa22.4■■□□□ 1.18
RPS28-202ENST00000449223 FRMD4AQ9P2Q2 1039 aaPredicted RBP22.4■■□□□ 1.18
RPS28-202ENST00000449223 CNTNAP5Q8WYK1 1306 aa22.4■■□□□ 1.18
RPS28-202ENST00000449223 FKBP1BP68106 108 aa22.39■■□□□ 1.17
RPS28-202ENST00000449223 USP17L2Q6R6M4 530 aa22.39■■□□□ 1.17
RPS28-202ENST00000449223 ANKRD13AQ8IZ07 590 aa22.39■■□□□ 1.17
RPS28-202ENST00000449223 SRBD1Q8N5C6 995 aaKnown RBP22.39■■□□□ 1.17
RPS28-202ENST00000449223 ZNF526Q8TF50 670 aaPredicted RBP22.39■■□□□ 1.17
RPS28-202ENST00000449223 SPZ1Q9BXG8 430 aa22.39■■□□□ 1.17
RPS28-202ENST00000449223 VCPKMTQ9H867 229 aa22.39■■□□□ 1.17
RPS28-202ENST00000449223 AS3MTQ9HBK9 375 aa22.39■■□□□ 1.17
RPS28-202ENST00000449223 GOPCQ9HD26 462 aa22.39■■□□□ 1.17
RPS28-202ENST00000449223 SNCAIPQ9Y6H5 919 aa22.39■■□□□ 1.17
RPS28-202ENST00000449223 TRPM7Q96QT4 1865 aa22.38■■□□□ 1.17
RPS28-202ENST00000449223 NDUFB10O96000 172 aa22.38■■□□□ 1.17
RPS28-202ENST00000449223 VGLL4Q14135 290 aa22.38■■□□□ 1.17
RPS28-202ENST00000449223 SLFN13Q68D06 897 aa22.38■■□□□ 1.17
RPS28-202ENST00000449223 CHADLQ6NUI6 762 aa22.38■■□□□ 1.17
RPS28-202ENST00000449223 RASGRP2Q7LDG7 609 aa22.38■■□□□ 1.17
RPS28-202ENST00000449223 TRIM22Q8IYM9 498 aa22.38■■□□□ 1.17
RPS28-202ENST00000449223 PHKBQ93100 1093 aa22.38■■□□□ 1.17
RPS28-202ENST00000449223 RBM27Q9P2N5 1060 aaKnown RBP22.38■■□□□ 1.17
RPS28-202ENST00000449223 ORC3Q9UBD5 711 aaPredicted RBP22.38■■□□□ 1.17
RPS28-202ENST00000449223 KLRF2D3W0D1 207 aa22.37■■□□□ 1.17
RPS28-202ENST00000449223 PRPF3O43395 683 aaKnown RBP22.37■■□□□ 1.17
RPS28-202ENST00000449223 SSRP1Q08945 709 aaKnown RBP22.37■■□□□ 1.17
RPS28-202ENST00000449223 LDLRAD1Q5T700 205 aa22.37■■□□□ 1.17
RPS28-202ENST00000449223 ARMC9Q7Z3E5 817 aa22.37■■□□□ 1.17
RPS28-202ENST00000449223 LPAR1Q92633 364 aa22.37■■□□□ 1.17
RPS28-202ENST00000449223 PTPRFP10586 1907 aa22.37■■□□□ 1.17
RPS28-202ENST00000449223 TRAF5O00463 557 aa22.36■■□□□ 1.17
RPS28-202ENST00000449223 DEXIO95424 95 aa22.36■■□□□ 1.17
RPS28-202ENST00000449223 ITGBL1O95965 494 aaPredicted RBP22.36■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms