RNA–Protein interactions for RNA: ENST00000449049.7

SHMT2-203, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2 BASIC

Gene SHMT2, Length 2,121 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-203ENST00000449049 ATP2B2Q01814 1243 aa16.43■□□□□ 0.22
SHMT2-203ENST00000449049 STK3Q13188 491 aa16.43■□□□□ 0.22
SHMT2-203ENST00000449049 LDLRAD1Q5T700 205 aa16.43■□□□□ 0.22
SHMT2-203ENST00000449049 MICU3Q86XE3 530 aa16.43■□□□□ 0.22
SHMT2-203ENST00000449049 RBM46Q8TBY0 533 aaKnown RBP16.43■□□□□ 0.22
SHMT2-203ENST00000449049 GTF3C6Q969F1 213 aa16.43■□□□□ 0.22
SHMT2-203ENST00000449049 MAP3K14Q99558 947 aa16.43■□□□□ 0.22
SHMT2-203ENST00000449049 SLKQ9H2G2 1235 aaPredicted RBP16.43■□□□□ 0.22
SHMT2-203ENST00000449049 NAP1L2Q9ULW6 460 aaPredicted RBP16.43■□□□□ 0.22
SHMT2-203ENST00000449049 CSADQ9Y600 493 aa16.43■□□□□ 0.22
SHMT2-203ENST00000449049 TOMM70O94826 608 aa16.42■□□□□ 0.22
SHMT2-203ENST00000449049 METAP2P50579 478 aaKnown RBP eCLIP16.42■□□□□ 0.221e-6■■■□□ 16.1
SHMT2-203ENST00000449049 SCRN1Q12765 414 aa16.42■□□□□ 0.22
SHMT2-203ENST00000449049 CCDC84Q86UT8 332 aaPredicted RBP16.42■□□□□ 0.22
SHMT2-203ENST00000449049 RAB11FIP4Q86YS3 637 aa16.42■□□□□ 0.22
SHMT2-203ENST00000449049 WDR18Q9BV38 432 aa16.42■□□□□ 0.22
SHMT2-203ENST00000449049 GBA2Q9HCG7 927 aaPredicted RBP16.42■□□□□ 0.22
SHMT2-203ENST00000449049 TMX2Q9Y320 296 aa16.42■□□□□ 0.22
SHMT2-203ENST00000449049 ECE1P42892 770 aa16.42■□□□□ 0.22
SHMT2-203ENST00000449049 CST9Q5W186 159 aa16.42■□□□□ 0.22
SHMT2-203ENST00000449049 NECAB1Q8N987 351 aa16.42■□□□□ 0.22
SHMT2-203ENST00000449049 GMCL1P1Q8NEA9 526 aa16.42■□□□□ 0.22
SHMT2-203ENST00000449049 ACER1Q8TDN7 264 aa16.42■□□□□ 0.22
SHMT2-203ENST00000449049 SH2D4AQ9H788 454 aa16.42■□□□□ 0.22
SHMT2-203ENST00000449049 AS3MTQ9HBK9 375 aa16.42■□□□□ 0.22
SHMT2-203ENST00000449049 GOLGA8AA7E2F4 631 aa16.41■□□□□ 0.22
SHMT2-203ENST00000449049 SNHG28P0DPA3 235 aa16.41■□□□□ 0.22
SHMT2-203ENST00000449049 RXRAP19793 462 aa16.41■□□□□ 0.22
SHMT2-203ENST00000449049 PPP2R5BQ15173 497 aa16.41■□□□□ 0.22
SHMT2-203ENST00000449049 FANCBQ8NB91 859 aa16.41■□□□□ 0.22
SHMT2-203ENST00000449049 NUP133Q8WUM0 1156 aa16.41■□□□□ 0.22
SHMT2-203ENST00000449049 FAM217BQ9NTX9 383 aaPredicted RBP16.41■□□□□ 0.22
SHMT2-203ENST00000449049 UBE2Q2LH0YL09 131 aa16.4■□□□□ 0.22
SHMT2-203ENST00000449049 CCT2P78371 535 aaKnown RBP16.4■□□□□ 0.22
SHMT2-203ENST00000449049 GRM4Q14833 912 aa16.4■□□□□ 0.22
SHMT2-203ENST00000449049 CCDC83Q8IWF9 413 aa16.4■□□□□ 0.22
SHMT2-203ENST00000449049 C2orf69Q8N8R5 385 aa16.4■□□□□ 0.22
SHMT2-203ENST00000449049 IPO9Q96P70 1041 aaKnown RBP16.4■□□□□ 0.22
SHMT2-203ENST00000449049 PDHBP11177 359 aa16.4■□□□□ 0.22
SHMT2-203ENST00000449049 RTN1Q16799 776 aa16.4■□□□□ 0.22
SHMT2-203ENST00000449049 CCDC144CPQ8IYA2 1237 aa16.4■□□□□ 0.22
SHMT2-203ENST00000449049 ZNF280CQ8ND82 737 aa16.4■□□□□ 0.22
SHMT2-203ENST00000449049 CLMNQ96JQ2 1002 aa16.4■□□□□ 0.22
SHMT2-203ENST00000449049 KIAA1683Q9H0B3 1180 aa16.4■□□□□ 0.22
SHMT2-203ENST00000449049 NCOA5Q9HCD5 579 aaKnown RBP16.4■□□□□ 0.22
SHMT2-203ENST00000449049 SPDYE5A6NIY4 337 aa16.39■□□□□ 0.21
SHMT2-203ENST00000449049 CDC27P30260 824 aa16.39■□□□□ 0.21
SHMT2-203ENST00000449049 CTCFLQ8NI51 663 aaPredicted RBP16.39■□□□□ 0.21
SHMT2-203ENST00000449049 CHMP4CQ96CF2 233 aa16.39■□□□□ 0.21
SHMT2-203ENST00000449049 VCPKMTQ9H867 229 aa16.39■□□□□ 0.21
SHMT2-203ENST00000449049 ELP3Q9H9T3 547 aa16.39■□□□□ 0.21
SHMT2-203ENST00000449049 RBM28Q9NW13 759 aaKnown RBP16.39■□□□□ 0.21
SHMT2-203ENST00000449049 ZHX2Q9Y6X8 837 aa16.39■□□□□ 0.21
SHMT2-203ENST00000449049 CCDC196A0A1B0GTZ2 297 aa16.39■□□□□ 0.21
SHMT2-203ENST00000449049 F5H6K3 240 aa16.39■□□□□ 0.21
SHMT2-203ENST00000449049 KLRC3Q07444 240 aa16.39■□□□□ 0.21
SHMT2-203ENST00000449049 RASGRP2Q7LDG7 609 aa16.39■□□□□ 0.21
SHMT2-203ENST00000449049 ERO1BQ86YB8 467 aa16.39■□□□□ 0.21
SHMT2-203ENST00000449049 DCAF4Q8WV16 495 aa16.39■□□□□ 0.21
SHMT2-203ENST00000449049 INTS4Q96HW7 963 aaKnown RBP16.39■□□□□ 0.21
SHMT2-203ENST00000449049 GMCL1Q96IK5 515 aa16.39■□□□□ 0.21
SHMT2-203ENST00000449049 GOPCQ9HD26 462 aa16.39■□□□□ 0.21
SHMT2-203ENST00000449049 AFG3L2Q9Y4W6 797 aa16.39■□□□□ 0.21
SHMT2-203ENST00000449049 PALM3A6NDB9 673 aaPredicted RBP16.38■□□□□ 0.21
SHMT2-203ENST00000449049 USP17L10C9JJH3 530 aa16.38■□□□□ 0.21
SHMT2-203ENST00000449049 DHX16O60231 1041 aaKnown RBP16.38■□□□□ 0.21
SHMT2-203ENST00000449049 NDUFB10O96000 172 aa16.38■□□□□ 0.21
SHMT2-203ENST00000449049 KIF5BP33176 963 aa16.38■□□□□ 0.21
SHMT2-203ENST00000449049 PPATQ06203 517 aa16.38■□□□□ 0.21
SHMT2-203ENST00000449049 SLFN13Q68D06 897 aa16.38■□□□□ 0.21
SHMT2-203ENST00000449049 MAD2L2Q9UI95 211 aa16.38■□□□□ 0.21
SHMT2-203ENST00000449049 ADD1P35611 737 aaKnown RBP16.37■□□□□ 0.21
SHMT2-203ENST00000449049 SLC4A3P48751 1232 aa16.37■□□□□ 0.21
SHMT2-203ENST00000449049 BACE1P56817 501 aa16.37■□□□□ 0.21
SHMT2-203ENST00000449049 FSTL1Q12841 308 aa16.37■□□□□ 0.21
SHMT2-203ENST00000449049 SPP2Q13103 211 aa16.37■□□□□ 0.21
SHMT2-203ENST00000449049 NTRK3Q16288 839 aa16.37■□□□□ 0.21
SHMT2-203ENST00000449049 ASPRV1Q53RT3 343 aa16.37■□□□□ 0.21
SHMT2-203ENST00000449049 FEZ1Q99689 392 aa16.37■□□□□ 0.21
SHMT2-203ENST00000449049 LLPHQ9BRT6 129 aaKnown RBP16.37■□□□□ 0.21
SHMT2-203ENST00000449049 MTMR7Q9Y216 660 aa16.37■□□□□ 0.21
SHMT2-203ENST00000449049 CTDNEP1O95476 244 aa16.37■□□□□ 0.21
SHMT2-203ENST00000449049 PARP1P09874 1014 aaKnown RBP16.37■□□□□ 0.21
SHMT2-203ENST00000449049 USP14P54578 494 aa16.37■□□□□ 0.21
SHMT2-203ENST00000449049 ZNF543Q08ER8 600 aa16.37■□□□□ 0.21
SHMT2-203ENST00000449049 MTMR2Q13614 643 aa16.37■□□□□ 0.21
SHMT2-203ENST00000449049 KIAA1755Q5JYT7 1200 aa16.37■□□□□ 0.21
SHMT2-203ENST00000449049 USP17L2Q6R6M4 530 aa16.37■□□□□ 0.21
SHMT2-203ENST00000449049 TMTC3Q6ZXV5 915 aa16.37■□□□□ 0.21
SHMT2-203ENST00000449049 CNKSR2Q8WXI2 1034 aa16.37■□□□□ 0.21
SHMT2-203ENST00000449049 C19orf81C9J6K1 198 aa16.36■□□□□ 0.21
SHMT2-203ENST00000449049 PPIL2Q13356 520 aa16.36■□□□□ 0.21
SHMT2-203ENST00000449049 STAG2Q8N3U4 1231 aa16.36■□□□□ 0.21
SHMT2-203ENST00000449049 NSUN7Q8NE18 718 aaKnown RBP16.36■□□□□ 0.21
SHMT2-203ENST00000449049 LPAR1Q92633 364 aa16.36■□□□□ 0.21
SHMT2-203ENST00000449049 C12orf42Q96LP6 360 aa16.36■□□□□ 0.21
SHMT2-203ENST00000449049 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.36■□□□□ 0.21
SHMT2-203ENST00000449049 PTPRFP10586 1907 aa16.36■□□□□ 0.21
SHMT2-203ENST00000449049 TRIM75PA6NK02 468 aa16.36■□□□□ 0.21
SHMT2-203ENST00000449049 CPLX1O14810 134 aa16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms