RNA–Protein interactions for RNA: ENST00000447310.5

ZNF550-204, Transcript of zinc finger protein 550, humanhuman

TSL 1 (best)

Gene ZNF550, Length 4,305 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF550-204ENST00000447310 CDC27P30260 824 aa12.56□□□□□ -0.4
ZNF550-204ENST00000447310 FAM47AQ5JRC9 791 aa12.56□□□□□ -0.4
ZNF550-204ENST00000447310 C2CD5Q86YS7 1000 aa12.56□□□□□ -0.4
ZNF550-204ENST00000447310 BCAS4Q8TDM0 211 aa12.56□□□□□ -0.4
ZNF550-204ENST00000447310 PANX2Q96RD6 677 aa12.56□□□□□ -0.4
ZNF550-204ENST00000447310 PLCD4Q9BRC7 762 aa12.56□□□□□ -0.4
ZNF550-204ENST00000447310 RNF40O75150 1001 aa12.56□□□□□ -0.4
ZNF550-204ENST00000447310 CYP2C19P33261 490 aa12.56□□□□□ -0.4
ZNF550-204ENST00000447310 MAP2K1Q02750 393 aaPredicted RBP12.56□□□□□ -0.4
ZNF550-204ENST00000447310 CYB5R4Q7L1T6 521 aa12.56□□□□□ -0.4
ZNF550-204ENST00000447310 TBC1D10CQ8IV04 446 aa12.56□□□□□ -0.4
ZNF550-204ENST00000447310 RPGRIP1Q96KN7 1286 aa12.56□□□□□ -0.4
ZNF550-204ENST00000447310 FBXO3Q9UK99 471 aa12.56□□□□□ -0.4
ZNF550-204ENST00000447310 CDC42BPGQ6DT37 1551 aa12.56□□□□□ -0.4
ZNF550-204ENST00000447310 PTPREP23469 700 aa12.56□□□□□ -0.4
ZNF550-204ENST00000447310 LIG3P49916 1009 aa12.56□□□□□ -0.4
ZNF550-204ENST00000447310 BCAMP50895 628 aa12.56□□□□□ -0.4
ZNF550-204ENST00000447310 IRX5P78411 483 aaPredicted RBP12.56□□□□□ -0.4
ZNF550-204ENST00000447310 ST5P78524 1137 aa12.56□□□□□ -0.4
ZNF550-204ENST00000447310 PPFIA1Q13136 1202 aa12.56□□□□□ -0.4
ZNF550-204ENST00000447310 C6orf50Q9HD87 102 aa12.56□□□□□ -0.4
ZNF550-204ENST00000447310 SRPRBQ9Y5M8 271 aaKnown RBP12.56□□□□□ -0.4
ZNF550-204ENST00000447310 PPLO60437 1756 aa12.55□□□□□ -0.4
ZNF550-204ENST00000447310 H7C1D1 291 aa12.55□□□□□ -0.4
ZNF550-204ENST00000447310 TRAF5O00463 557 aa12.55□□□□□ -0.4
ZNF550-204ENST00000447310 KRT79Q5XKE5 535 aa12.55□□□□□ -0.4
ZNF550-204ENST00000447310 METTL16Q86W50 562 aaKnown RBP12.55□□□□□ -0.4
ZNF550-204ENST00000447310 ANKRD13CQ8N6S4 541 aa12.55□□□□□ -0.4
ZNF550-204ENST00000447310 PXDNLA1KZ92 1463 aa12.55□□□□□ -0.4
ZNF550-204ENST00000447310 USP17L12C9JPN9 530 aa12.55□□□□□ -0.4
ZNF550-204ENST00000447310 USP17L21D6R901 530 aa12.55□□□□□ -0.4
ZNF550-204ENST00000447310 PRR29P0C7W0 189 aa12.55□□□□□ -0.4
ZNF550-204ENST00000447310 HSPA2P54652 639 aa12.55□□□□□ -0.4
ZNF550-204ENST00000447310 COL9A3Q14050 684 aaPredicted RBP12.55□□□□□ -0.4
ZNF550-204ENST00000447310 CCDC121Q6ZUS5 278 aa12.55□□□□□ -0.4
ZNF550-204ENST00000447310 ZSCAN29Q8IWY8 852 aaPredicted RBP12.55□□□□□ -0.4
ZNF550-204ENST00000447310 CCDC114Q96M63 670 aa12.55□□□□□ -0.4
ZNF550-204ENST00000447310 DEPDC5O75140 1603 aa12.55□□□□□ -0.4
ZNF550-204ENST00000447310 GTPBP6O43824 516 aaPredicted RBP12.55□□□□□ -0.4
ZNF550-204ENST00000447310 GNGT1P63211 74 aa12.55□□□□□ -0.4
ZNF550-204ENST00000447310 RAPGEF1Q13905 1077 aa12.55□□□□□ -0.4
ZNF550-204ENST00000447310 TTC19Q6DKK2 380 aaPredicted RBP12.55□□□□□ -0.4
ZNF550-204ENST00000447310 ARFGAP2Q8N6H7 521 aa12.55□□□□□ -0.4
ZNF550-204ENST00000447310 SELENOOQ9BVL4 669 aa12.55□□□□□ -0.4
ZNF550-204ENST00000447310 LRRC27Q9C0I9 530 aa12.55□□□□□ -0.4
ZNF550-204ENST00000447310 ARHGEF28Q8N1W1 1705 aaKnown RBP12.54□□□□□ -0.4
ZNF550-204ENST00000447310 MFAP3LO75121 409 aa12.54□□□□□ -0.4
ZNF550-204ENST00000447310 RPN1P04843 607 aaKnown RBP12.54□□□□□ -0.4
ZNF550-204ENST00000447310 ATP6V1AP38606 617 aa12.54□□□□□ -0.4
ZNF550-204ENST00000447310 MCAMP43121 646 aa12.54□□□□□ -0.4
ZNF550-204ENST00000447310 KCNJ6P48051 423 aa12.54□□□□□ -0.4
ZNF550-204ENST00000447310 CCT5P48643 541 aa12.54□□□□□ -0.4
ZNF550-204ENST00000447310 DNM2P50570 870 aa12.54□□□□□ -0.4
ZNF550-204ENST00000447310 SCARF1Q14162 830 aa12.54□□□□□ -0.4
ZNF550-204ENST00000447310 B4GALNT4Q76KP1 1039 aa12.54□□□□□ -0.4
ZNF550-204ENST00000447310 SV2BQ7L1I2 683 aa12.54□□□□□ -0.4
ZNF550-204ENST00000447310 L2HGDHQ9H9P8 463 aa12.54□□□□□ -0.4
ZNF550-204ENST00000447310 PIH1D3Q9NQM4 214 aaKnown RBP12.54□□□□□ -0.4
ZNF550-204ENST00000447310 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.54□□□□□ -0.4
ZNF550-204ENST00000447310 MRFAP1Q9Y605 127 aa12.54□□□□□ -0.4
ZNF550-204ENST00000447310 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP12.54□□□□□ -0.4
ZNF550-204ENST00000447310 TXKP42681 527 aa12.54□□□□□ -0.4
ZNF550-204ENST00000447310 TNNI2P48788 182 aa12.54□□□□□ -0.4
ZNF550-204ENST00000447310 IFI16Q16666 785 aaKnown RBP12.54□□□□□ -0.4
ZNF550-204ENST00000447310 RRAGAQ7L523 313 aa12.54□□□□□ -0.4
ZNF550-204ENST00000447310 DYMQ7RTS9 669 aa12.54□□□□□ -0.4
ZNF550-204ENST00000447310 ACSBG1Q96GR2 724 aa12.54□□□□□ -0.4
ZNF550-204ENST00000447310 NLRC4Q9NPP4 1024 aa12.54□□□□□ -0.4
ZNF550-204ENST00000447310 AATFQ9NY61 560 aaKnown RBP eCLIP12.54□□□□□ -0.4
ZNF550-204ENST00000447310 ADGRG1Q9Y653 693 aa12.54□□□□□ -0.4
ZNF550-204ENST00000447310 TLDC2A0PJX2 215 aa12.54□□□□□ -0.4
ZNF550-204ENST00000447310 LIFRP42702 1097 aa12.54□□□□□ -0.4
ZNF550-204ENST00000447310 ATP1A2P50993 1020 aa12.54□□□□□ -0.4
ZNF550-204ENST00000447310 ZSCAN10Q96SZ4 725 aaPredicted RBP12.54□□□□□ -0.4
ZNF550-204ENST00000447310 ATG3Q9NT62 314 aa12.54□□□□□ -0.4
ZNF550-204ENST00000447310 LDHCP07864 332 aa12.53□□□□□ -0.4
ZNF550-204ENST00000447310 TNNC1P63316 161 aa12.53□□□□□ -0.4
ZNF550-204ENST00000447310 CPLX4Q7Z7G2 160 aa12.53□□□□□ -0.4
ZNF550-204ENST00000447310 CRACR2BQ8N4Y2 399 aaPredicted RBP12.53□□□□□ -0.4
ZNF550-204ENST00000447310 NOX5Q96PH1 765 aa12.53□□□□□ -0.4
ZNF550-204ENST00000447310 MYO1AQ9UBC5 1043 aa12.53□□□□□ -0.4
ZNF550-204ENST00000447310 MROH5Q6ZUA9 1318 aa12.53□□□□□ -0.4
ZNF550-204ENST00000447310 CCNT1O60563 726 aaKnown RBP12.53□□□□□ -0.4
ZNF550-204ENST00000447310 GNA11P29992 359 aa12.53□□□□□ -0.4
ZNF550-204ENST00000447310 CERS3Q8IU89 383 aa12.53□□□□□ -0.4
ZNF550-204ENST00000447310 IFT20Q8IY31 132 aa12.53□□□□□ -0.4
ZNF550-204ENST00000447310 PAGE5Q96GU1 130 aa12.53□□□□□ -0.4
ZNF550-204ENST00000447310 PARP3Q9Y6F1 533 aa12.53□□□□□ -0.4
ZNF550-204ENST00000447310 RFX7Q2KHR2 1363 aa12.53□□□□□ -0.4
ZNF550-204ENST00000447310 ERVV-2B6SEH9 535 aa12.53□□□□□ -0.4
ZNF550-204ENST00000447310 ZPR1O75312 459 aa12.53□□□□□ -0.4
ZNF550-204ENST00000447310 PARP1P09874 1014 aaKnown RBP12.53□□□□□ -0.4
ZNF550-204ENST00000447310 KRT31Q15323 416 aa12.53□□□□□ -0.4
ZNF550-204ENST00000447310 CNNM4Q6P4Q7 775 aa12.53□□□□□ -0.4
ZNF550-204ENST00000447310 ATG9AQ7Z3C6 839 aa12.53□□□□□ -0.4
ZNF550-204ENST00000447310 TRIM58Q8NG06 486 aa12.53□□□□□ -0.4
ZNF550-204ENST00000447310 RNF26Q9BY78 433 aaPredicted RBP12.53□□□□□ -0.4
ZNF550-204ENST00000447310 ZKSCAN7Q9P0L1 754 aaPredicted RBP12.53□□□□□ -0.4
ZNF550-204ENST00000447310 CYP27B1O15528 508 aa12.53□□□□□ -0.4
ZNF550-204ENST00000447310 NEFHP12036 1026 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms