RNA–Protein interactions for RNA: ENST00000442625.2

MCF2L-218, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 1 (best)

Gene MCF2L, Length 2,710 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-218ENST00000442625 HDXQ7Z353 690 aa15.99■□□□□ 0.15
MCF2L-218ENST00000442625 SRLQ86TD4 932 aa15.99■□□□□ 0.15
MCF2L-218ENST00000442625 PANX2Q96RD6 677 aa15.99■□□□□ 0.15
MCF2L-218ENST00000442625 PLEKHG2Q9H7P9 1386 aa15.99■□□□□ 0.15
MCF2L-218ENST00000442625 STK36Q9NRP7 1315 aa15.99■□□□□ 0.15
MCF2L-218ENST00000442625 HDAC6Q9UBN7 1215 aa15.99■□□□□ 0.15
MCF2L-218ENST00000442625 ADD3Q9UEY8 706 aaKnown RBP15.99■□□□□ 0.15
MCF2L-218ENST00000442625 SYNRGQ9UMZ2 1314 aa15.99■□□□□ 0.15
MCF2L-218ENST00000442625 ZBTB1Q9Y2K1 713 aa15.99■□□□□ 0.15
MCF2L-218ENST00000442625 CTAGE9A4FU28 777 aa15.98■□□□□ 0.15
MCF2L-218ENST00000442625 ZMYND10O75800 440 aa15.98■□□□□ 0.15
MCF2L-218ENST00000442625 UQCRFS1P1P0C7P4 283 aa15.98■□□□□ 0.15
MCF2L-218ENST00000442625 MAP3K12Q12852 859 aa15.98■□□□□ 0.15
MCF2L-218ENST00000442625 RILPL1Q5EBL4 403 aa15.98■□□□□ 0.15
MCF2L-218ENST00000442625 EP400NLQ6ZTU2 488 aa15.98■□□□□ 0.15
MCF2L-218ENST00000442625 CRACR2BQ8N4Y2 399 aaPredicted RBP15.98■□□□□ 0.15
MCF2L-218ENST00000442625 LPIN2Q92539 896 aa15.98■□□□□ 0.15
MCF2L-218ENST00000442625 WASF1Q92558 559 aa15.98■□□□□ 0.15
MCF2L-218ENST00000442625 CTNND2Q9UQB3 1225 aa15.98■□□□□ 0.15
MCF2L-218ENST00000442625 COL5A2P05997 1499 aaPredicted RBP15.98■□□□□ 0.15
MCF2L-218ENST00000442625 CASP8Q14790 479 aa15.98■□□□□ 0.15
MCF2L-218ENST00000442625 SLC4A9Q96Q91 983 aa15.98■□□□□ 0.15
MCF2L-218ENST00000442625 VPS54Q9P1Q0 977 aa15.98■□□□□ 0.15
MCF2L-218ENST00000442625 MYO1BO43795 1136 aa15.97■□□□□ 0.15
MCF2L-218ENST00000442625 BCAMP50895 628 aa15.97■□□□□ 0.15
MCF2L-218ENST00000442625 ALX1Q15699 326 aa15.97■□□□□ 0.15
MCF2L-218ENST00000442625 RIN2Q8WYP3 895 aaPredicted RBP15.97■□□□□ 0.15
MCF2L-218ENST00000442625 KRT23Q9C075 422 aa15.97■□□□□ 0.15
MCF2L-218ENST00000442625 FOXP1Q9H334 677 aaPredicted RBP15.97■□□□□ 0.15
MCF2L-218ENST00000442625 DACH1Q9UI36 760 aa15.97■□□□□ 0.15
MCF2L-218ENST00000442625 MYH8P13535 1937 aa15.97■□□□□ 0.15
MCF2L-218ENST00000442625 TTC36A6NLP5 189 aa15.97■□□□□ 0.15
MCF2L-218ENST00000442625 MINDY4BA8MYZ0 360 aa15.97■□□□□ 0.15
MCF2L-218ENST00000442625 PDE8AO60658 829 aa15.97■□□□□ 0.15
MCF2L-218ENST00000442625 SRGAP2O75044 1071 aa15.97■□□□□ 0.15
MCF2L-218ENST00000442625 PPP1R3FQ6ZSY5 799 aaPredicted RBP15.97■□□□□ 0.15
MCF2L-218ENST00000442625 BRINP3Q76B58 766 aa15.97■□□□□ 0.15
MCF2L-218ENST00000442625 SDR42E1Q8WUS8 393 aa15.97■□□□□ 0.15
MCF2L-218ENST00000442625 CHP1Q99653 195 aa15.97■□□□□ 0.15
MCF2L-218ENST00000442625 ERICH2A1L162 156 aa15.96■□□□□ 0.15
MCF2L-218ENST00000442625 DEXIO95424 95 aa15.96■□□□□ 0.15
MCF2L-218ENST00000442625 CUL4BQ13620 913 aa15.96■□□□□ 0.15
MCF2L-218ENST00000442625 SPATA1Q5VX52 437 aa15.96■□□□□ 0.15
MCF2L-218ENST00000442625 LEKR1Q6ZMV7 388 aa15.96■□□□□ 0.15
MCF2L-218ENST00000442625 RASGRP2Q7LDG7 609 aa15.96■□□□□ 0.15
MCF2L-218ENST00000442625 CEP112Q8N8E3 955 aa15.96■□□□□ 0.15
MCF2L-218ENST00000442625 FANCBQ8NB91 859 aa15.96■□□□□ 0.15
MCF2L-218ENST00000442625 SYMPKQ92797 1274 aaKnown RBP15.96■□□□□ 0.15
MCF2L-218ENST00000442625 PAGE5Q96GU1 130 aa15.96■□□□□ 0.15
MCF2L-218ENST00000442625 CNNM2Q9H8M5 875 aa15.96■□□□□ 0.15
MCF2L-218ENST00000442625 TAB2Q9NYJ8 693 aa15.96■□□□□ 0.15
MCF2L-218ENST00000442625 SRPRBQ9Y5M8 271 aaKnown RBP15.96■□□□□ 0.15
MCF2L-218ENST00000442625 FGFR2P21802 821 aa15.96■□□□□ 0.15
MCF2L-218ENST00000442625 PBX1P40424 430 aa15.96■□□□□ 0.15
MCF2L-218ENST00000442625 AKAP17AQ02040 695 aaKnown RBP15.96■□□□□ 0.15
MCF2L-218ENST00000442625 SART3Q15020 963 aaKnown RBP15.96■□□□□ 0.15
MCF2L-218ENST00000442625 GSPT2Q8IYD1 628 aaKnown RBP15.96■□□□□ 0.15
MCF2L-218ENST00000442625 ZNF654Q8IZM8 581 aa15.96■□□□□ 0.15
MCF2L-218ENST00000442625 RAB21Q9UL25 225 aa15.96■□□□□ 0.15
MCF2L-218ENST00000442625 GUCA1BQ9UMX6 200 aa15.96■□□□□ 0.15
MCF2L-218ENST00000442625 BAZ2BQ9UIF8 2168 aaKnown RBP15.96■□□□□ 0.15
MCF2L-218ENST00000442625 ZNF174Q15697 407 aa15.96■□□□□ 0.14
MCF2L-218ENST00000442625 MSANTD4Q8NCY6 345 aa15.96■□□□□ 0.14
MCF2L-218ENST00000442625 EEF2KMTQ96G04 330 aa15.96■□□□□ 0.14
MCF2L-218ENST00000442625 PAPPAQ13219 1627 aa15.95■□□□□ 0.14
MCF2L-218ENST00000442625 CTAGE15A4D2H0 777 aa15.95■□□□□ 0.14
MCF2L-218ENST00000442625 PPP1R3GB7ZBB8 358 aa15.95■□□□□ 0.14
MCF2L-218ENST00000442625 CTAGE8P0CG41 777 aa15.95■□□□□ 0.14
MCF2L-218ENST00000442625 SLC5A1P13866 664 aa15.95■□□□□ 0.14
MCF2L-218ENST00000442625 ARHGAP25P42331 645 aa15.95■□□□□ 0.14
MCF2L-218ENST00000442625 CTAGE6Q86UF2 777 aa15.95■□□□□ 0.14
MCF2L-218ENST00000442625 CTAGE4Q8IX94 777 aa15.95■□□□□ 0.14
MCF2L-218ENST00000442625 NUP88Q99567 741 aaPredicted RBP15.95■□□□□ 0.14
MCF2L-218ENST00000442625 CWC15Q9P013 229 aaKnown RBP15.95■□□□□ 0.14
MCF2L-218ENST00000442625 N4BP3O15049 544 aa15.95■□□□□ 0.14
MCF2L-218ENST00000442625 ADGRA1Q86SQ6 560 aa15.95■□□□□ 0.14
MCF2L-218ENST00000442625 SPATA20Q8TB22 786 aa15.95■□□□□ 0.14
MCF2L-218ENST00000442625 STAG1Q8WVM7 1258 aa15.95■□□□□ 0.14
MCF2L-218ENST00000442625 CAPZA3Q96KX2 299 aa15.95■□□□□ 0.14
MCF2L-218ENST00000442625 NAPGQ99747 312 aaPredicted RBP15.95■□□□□ 0.14
MCF2L-218ENST00000442625 UBAC1Q9BSL1 405 aa15.95■□□□□ 0.14
MCF2L-218ENST00000442625 RABEP2Q9H5N1 569 aa15.95■□□□□ 0.14
MCF2L-218ENST00000442625 ERCC5P28715 1186 aaPredicted RBP15.94■□□□□ 0.14
MCF2L-218ENST00000442625 USP5P45974 858 aa15.94■□□□□ 0.14
MCF2L-218ENST00000442625 KRT31Q15323 416 aa15.94■□□□□ 0.14
MCF2L-218ENST00000442625 HNRNPLLQ8WVV9 542 aaKnown RBP15.94■□□□□ 0.14
MCF2L-218ENST00000442625 NACAP1Q9BZK3 213 aa15.94■□□□□ 0.14
MCF2L-218ENST00000442625 FAM204AQ9H8W3 233 aa15.94■□□□□ 0.14
MCF2L-218ENST00000442625 LRP2BPQ9P2M1 347 aa15.94■□□□□ 0.14
MCF2L-218ENST00000442625 CYP2D7A0A087X1C5 515 aa15.94■□□□□ 0.14
MCF2L-218ENST00000442625 CYP19A1P11511 503 aaPredicted RBP15.94■□□□□ 0.14
MCF2L-218ENST00000442625 CDKAL1Q5VV42 579 aa15.94■□□□□ 0.14
MCF2L-218ENST00000442625 DZIP3Q86Y13 1208 aaKnown RBP15.94■□□□□ 0.14
MCF2L-218ENST00000442625 PSD3Q9NYI0 1048 aa15.94■□□□□ 0.14
MCF2L-218ENST00000442625 PES1O00541 588 aaKnown RBP15.93■□□□□ 0.14
MCF2L-218ENST00000442625 ERLIN1O75477 346 aa15.93■□□□□ 0.14
MCF2L-218ENST00000442625 LRRC31Q6UY01 552 aa15.93■□□□□ 0.14
MCF2L-218ENST00000442625 ELOA2Q8IYF1 753 aaPredicted RBP15.93■□□□□ 0.14
MCF2L-218ENST00000442625 TSPYL1Q9H0U9 437 aa15.93■□□□□ 0.14
MCF2L-218ENST00000442625 ABHD10Q9NUJ1 306 aa15.93■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms